RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 C8orf87E5RJ46 101 aa10.53□□□□□ -0.72
CHRNB1-206ENST00000574054 MT2AP02795 61 aa10.53□□□□□ -0.72
CHRNB1-206ENST00000574054 RBM3P98179 157 aaKnown RBP10.53□□□□□ -0.72
CHRNB1-206ENST00000574054 SMIM6P0DI80 62 aa10.52□□□□□ -0.73
CHRNB1-206ENST00000574054 DSCR8Q96T75 97 aa10.52□□□□□ -0.73
CHRNB1-206ENST00000574054 LOC105371267A0A1B0GV96 52 aa10.51□□□□□ -0.73
CHRNB1-206ENST00000574054 C9JAW5 83 aa10.45□□□□□ -0.74
CHRNB1-206ENST00000574054 MT1FP04733 61 aa10.45□□□□□ -0.74
CHRNB1-206ENST00000574054 BAALC-AS2P0C853 105 aa10.45□□□□□ -0.74
CHRNB1-206ENST00000574054 J3KT08 172 aa10.44□□□□□ -0.74
CHRNB1-206ENST00000574054 KRTAP10-10P60014 251 aa10.44□□□□□ -0.74
CHRNB1-206ENST00000574054 ZCCHC13Q8WW36 166 aaKnown RBP10.44□□□□□ -0.74
CHRNB1-206ENST00000574054 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.43□□□□□ -0.74
CHRNB1-206ENST00000574054 MTURNQ8N3F0 131 aa10.43□□□□□ -0.74
CHRNB1-206ENST00000574054 C21orf62-AS1Q17RA5 79 aa10.42□□□□□ -0.74
CHRNB1-206ENST00000574054 Q6ZQT0 140 aa10.4□□□□□ -0.74
CHRNB1-206ENST00000574054 SPINK7P58062 85 aa10.39□□□□□ -0.75
CHRNB1-206ENST00000574054 NDUFB1O75438 58 aa10.38□□□□□ -0.75
CHRNB1-206ENST00000574054 KRTAP9-7A8MTY7 169 aa10.37□□□□□ -0.75
CHRNB1-206ENST00000574054 FCGBPQ9Y6R7 5405 aaPredicted RBP10.37□□□□□ -0.75
CHRNB1-206ENST00000574054 LCE2BO14633 110 aa10.36□□□□□ -0.75
CHRNB1-206ENST00000574054 LYRM7Q5U5X0 104 aa10.35□□□□□ -0.75
CHRNB1-206ENST00000574054 KRTAP9-3Q9BYQ3 159 aa10.35□□□□□ -0.75
CHRNB1-206ENST00000574054 Q8N9P0 234 aaPredicted RBP10.33□□□□□ -0.76
CHRNB1-206ENST00000574054 TSTD3H0UI37 97 aa10.32□□□□□ -0.76
CHRNB1-206ENST00000574054 ATXN8Q156A1 80 aa10.32□□□□□ -0.76
CHRNB1-206ENST00000574054 NAA38Q9BRA0 125 aaKnown RBP10.32□□□□□ -0.76
CHRNB1-206ENST00000574054 C8orf17Q9NRJ1 99 aa10.32□□□□□ -0.76
CHRNB1-206ENST00000574054 A8MWP4 228 aa10.31□□□□□ -0.76
CHRNB1-206ENST00000574054 JMJD7-PLA2G4BH0Y9G9 81 aa10.3□□□□□ -0.76
CHRNB1-206ENST00000574054 KRTAP19-1Q8IUB9 90 aa10.29□□□□□ -0.76
CHRNB1-206ENST00000574054 LOC110117498A0A087WWA1 95 aa10.28□□□□□ -0.76
CHRNB1-206ENST00000574054 IGKV3D-7A0A0C4DH55 119 aa10.27□□□□□ -0.77
CHRNB1-206ENST00000574054 WFDC13Q8IUB5 93 aa10.27□□□□□ -0.77
CHRNB1-206ENST00000574054 M0R143 59 aa10.26□□□□□ -0.77
CHRNB1-206ENST00000574054 A0A1B0GW54 56 aa10.24□□□□□ -0.77
CHRNB1-206ENST00000574054 PDE6GP18545 87 aa10.24□□□□□ -0.77
CHRNB1-206ENST00000574054 Q6ZVQ6 151 aa10.24□□□□□ -0.77
CHRNB1-206ENST00000574054 C14orf132Q9NPU4 83 aa10.24□□□□□ -0.77
CHRNB1-206ENST00000574054 PRR15Q8IV56 129 aa10.19□□□□□ -0.78
CHRNB1-206ENST00000574054 NREPQ16612 68 aa10.18□□□□□ -0.78
CHRNB1-206ENST00000574054 MMP24-AS1A0A0U1RRL7 71 aa10.13□□□□□ -0.79
CHRNB1-206ENST00000574054 TMEM254Q8TBM7 123 aa10.12□□□□□ -0.79
CHRNB1-206ENST00000574054 MRPL34Q9BQ48 92 aaKnown RBP10.12□□□□□ -0.79
CHRNB1-206ENST00000574054 NDUFS5O43920 106 aa10.09□□□□□ -0.79
CHRNB1-206ENST00000574054 LINC00846Q9NV44 126 aa10.09□□□□□ -0.79
CHRNB1-206ENST00000574054 hDV103S1A0JD37 113 aa10.07□□□□□ -0.8
CHRNB1-206ENST00000574054 K7EQZ3 153 aa10.06□□□□□ -0.8
CHRNB1-206ENST00000574054 BATFQ16520 125 aa10.06□□□□□ -0.8
CHRNB1-206ENST00000574054 H1FX-AS1Q4G0G2 97 aa10.05□□□□□ -0.8
CHRNB1-206ENST00000574054 KRTAP19-6Q3LI70 58 aa10.02□□□□□ -0.81
CHRNB1-206ENST00000574054 IGKV2D-30A0A075B6S6 120 aa10.01□□□□□ -0.81
CHRNB1-206ENST00000574054 IGKV2-30P06310 120 aa10.01□□□□□ -0.81
CHRNB1-206ENST00000574054 BPY2O14599 106 aa9.99□□□□□ -0.81
CHRNB1-206ENST00000574054 MACF1Q9UPN3 7388 aaKnown RBP9.99□□□□□ -0.81
CHRNB1-206ENST00000574054 H3BT86 120 aa9.97□□□□□ -0.81
CHRNB1-206ENST00000574054 C9orf118A6NHY6 69 aa9.95□□□□□ -0.82
CHRNB1-206ENST00000574054 C7orf65Q6ZTY9 151 aa9.95□□□□□ -0.82
CHRNB1-206ENST00000574054 TAX1BP3O14907 124 aa9.93□□□□□ -0.82
CHRNB1-206ENST00000574054 Q5W150 140 aa9.93□□□□□ -0.82
CHRNB1-206ENST00000574054 PCP4L1A6NKN8 68 aa9.92□□□□□ -0.82
CHRNB1-206ENST00000574054 COL5A1-AS1Q5SY13 56 aa9.91□□□□□ -0.82
CHRNB1-206ENST00000574054 SYNE2Q8WXH0 6885 aaKnown RBP9.9□□□□□ -0.82
CHRNB1-206ENST00000574054 A0A1W2PPM0 123 aa9.9□□□□□ -0.82
CHRNB1-206ENST00000574054 Q8N9L7 120 aa9.9□□□□□ -0.82
CHRNB1-206ENST00000574054 CASC2Q6XLA1 102 aa9.88□□□□□ -0.83
CHRNB1-206ENST00000574054 HCG22E2RYF7 251 aa9.87□□□□□ -0.83
CHRNB1-206ENST00000574054 C4orf26Q17RF5 130 aa9.83□□□□□ -0.84
CHRNB1-206ENST00000574054 CXCL6P80162 114 aa9.78□□□□□ -0.84
CHRNB1-206ENST00000574054 SPCS1Q9Y6A9 102 aa9.76□□□□□ -0.85
CHRNB1-206ENST00000574054 C5orf47Q569G3 176 aa9.75□□□□□ -0.85
CHRNB1-206ENST00000574054 FAM236AA0A1B0GUQ0 79 aa9.71□□□□□ -0.86
CHRNB1-206ENST00000574054 FAM236BA0A1B0GV22 79 aa9.71□□□□□ -0.86
CHRNB1-206ENST00000574054 SMCPP49901 116 aaPredicted RBP9.71□□□□□ -0.86
CHRNB1-206ENST00000574054 UBL5Q9BZL1 73 aa9.7□□□□□ -0.86
CHRNB1-206ENST00000574054 K7EP34 96 aa9.68□□□□□ -0.86
CHRNB1-206ENST00000574054 KRTAP6-3Q3LI67 103 aa9.67□□□□□ -0.86
CHRNB1-206ENST00000574054 GTF2H5Q6ZYL4 71 aa9.67□□□□□ -0.86
CHRNB1-206ENST00000574054 S4R3F8 94 aa9.66□□□□□ -0.86
CHRNB1-206ENST00000574054 KRTAP3-1Q9BYR8 98 aa9.63□□□□□ -0.87
CHRNB1-206ENST00000574054 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
CHRNB1-206ENST00000574054 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
CHRNB1-206ENST00000574054 PRO0461Q9UI25 63 aa9.59□□□□□ -0.87
CHRNB1-206ENST00000574054 F8W1H4 67 aa9.57□□□□□ -0.88
CHRNB1-206ENST00000574054 LCA10Q71F78 164 aa9.57□□□□□ -0.88
CHRNB1-206ENST00000574054 A6NN06 94 aa9.54□□□□□ -0.88
CHRNB1-206ENST00000574054 Q5VV11 94 aa9.54□□□□□ -0.88
CHRNB1-206ENST00000574054 TP53AIP1Q9HCN2 124 aa9.53□□□□□ -0.88
CHRNB1-206ENST00000574054 MT1BP07438 61 aa9.52□□□□□ -0.89
CHRNB1-206ENST00000574054 SPRR2GQ9BYE4 73 aa9.48□□□□□ -0.89
CHRNB1-206ENST00000574054 KRTAP19-8Q3LI54 63 aa9.46□□□□□ -0.9
CHRNB1-206ENST00000574054 KLKP1Q107X0 134 aa9.42□□□□□ -0.9
CHRNB1-206ENST00000574054 ETDBQ3ZM63 59 aa9.4□□□□□ -0.9
CHRNB1-206ENST00000574054 A0A1B0GV90 55 aa9.39□□□□□ -0.91
CHRNB1-206ENST00000574054 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
CHRNB1-206ENST00000574054 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
CHRNB1-206ENST00000574054 NEBP20929 6669 aa9.37□□□□□ -0.91
CHRNB1-206ENST00000574054 KRTAP10-5P60370 271 aa9.35□□□□□ -0.91
CHRNB1-206ENST00000574054 MUC12Q9UKN1 5478 aa9.33□□□□□ -0.92
CHRNB1-206ENST00000574054 A0A087WVE0 104 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms