RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 UQCRQO14949 82 aa7.37□□□□□ -1.23
PRPF8-207ENST00000573681 CASC2Q6XLA1 102 aa7.37□□□□□ -1.23
PRPF8-207ENST00000573681 IGHV6-1A0A0B4J1U7 121 aa7.36□□□□□ -1.23
PRPF8-207ENST00000573681 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
PRPF8-207ENST00000573681 WFDC13Q8IUB5 93 aa7.36□□□□□ -1.23
PRPF8-207ENST00000573681 C8orf17Q9NRJ1 99 aa7.36□□□□□ -1.23
PRPF8-207ENST00000573681 C8orf87E5RJ46 101 aa7.35□□□□□ -1.23
PRPF8-207ENST00000573681 MMP24-AS1A0A0U1RRL7 71 aa7.34□□□□□ -1.23
PRPF8-207ENST00000573681 hDV103S1A0JD37 113 aa7.34□□□□□ -1.23
PRPF8-207ENST00000573681 OCR1Q9BZK8 76 aa7.34□□□□□ -1.23
PRPF8-207ENST00000573681 PKHD1L1Q86WI1 4243 aa7.33□□□□□ -1.24
PRPF8-207ENST00000573681 KRTAP17-1Q9BYP8 105 aa7.32□□□□□ -1.24
PRPF8-207ENST00000573681 CCDC179H3BU77 68 aa7.31□□□□□ -1.24
PRPF8-207ENST00000573681 TMEM254Q8TBM7 123 aa7.31□□□□□ -1.24
PRPF8-207ENST00000573681 EPPK1P58107 5090 aaKnown RBP7.31□□□□□ -1.24
PRPF8-207ENST00000573681 KIAA1109Q2LD37 5005 aa7.29□□□□□ -1.24
PRPF8-207ENST00000573681 LINC00313P59037 77 aa7.29□□□□□ -1.24
PRPF8-207ENST00000573681 C5orf47Q569G3 176 aa7.28□□□□□ -1.24
PRPF8-207ENST00000573681 MRPL34Q9BQ48 92 aaKnown RBP7.28□□□□□ -1.24
PRPF8-207ENST00000573681 TP53AIP1Q9HCN2 124 aa7.27□□□□□ -1.25
PRPF8-207ENST00000573681 OXTP01178 125 aa7.26□□□□□ -1.25
PRPF8-207ENST00000573681 NOTCH2NLQ7Z3S9 236 aa7.26□□□□□ -1.25
PRPF8-207ENST00000573681 C20orf197Q8N268 126 aa7.23□□□□□ -1.25
PRPF8-207ENST00000573681 MP68P56378 58 aa7.21□□□□□ -1.26
PRPF8-207ENST00000573681 NDUFS5O43920 106 aa7.2□□□□□ -1.26
PRPF8-207ENST00000573681 KLKP1Q107X0 134 aa7.2□□□□□ -1.26
PRPF8-207ENST00000573681 H3BPC8 53 aa7.19□□□□□ -1.26
PRPF8-207ENST00000573681 MT1HL1P0DM35 61 aa7.19□□□□□ -1.26
PRPF8-207ENST00000573681 Q8N9P0 234 aaPredicted RBP7.19□□□□□ -1.26
PRPF8-207ENST00000573681 A0A0U1RQV1 116 aa7.18□□□□□ -1.26
PRPF8-207ENST00000573681 NDUFC1O43677 76 aa7.18□□□□□ -1.26
PRPF8-207ENST00000573681 KRTAP16-1A8MUX0 517 aa7.17□□□□□ -1.26
PRPF8-207ENST00000573681 FP248Q71RG6 208 aaPredicted RBP7.17□□□□□ -1.26
PRPF8-207ENST00000573681 H0Y9P7 68 aa7.15□□□□□ -1.26
PRPF8-207ENST00000573681 KRTAP4-5Q9BYR2 181 aa7.15□□□□□ -1.26
PRPF8-207ENST00000573681 SNURFQ9Y675 71 aa7.15□□□□□ -1.26
PRPF8-207ENST00000573681 FAT3Q8TDW7 4589 aa7.15□□□□□ -1.27
PRPF8-207ENST00000573681 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
PRPF8-207ENST00000573681 TRAV22A0A0B4J277 110 aa7.14□□□□□ -1.27
PRPF8-207ENST00000573681 RETNLBQ9BQ08 111 aa7.14□□□□□ -1.27
PRPF8-207ENST00000573681 ZCCHC13Q8WW36 166 aaKnown RBP7.12□□□□□ -1.27
PRPF8-207ENST00000573681 LINC00208Q96KT6 92 aa7.12□□□□□ -1.27
PRPF8-207ENST00000573681 TNXBP22105 4242 aa7.11□□□□□ -1.27
PRPF8-207ENST00000573681 LRP1Q07954 4544 aaKnown RBP7.11□□□□□ -1.27
PRPF8-207ENST00000573681 C1orf64Q8NEQ6 169 aa7.1□□□□□ -1.27
PRPF8-207ENST00000573681 CYSTM1Q9H1C7 97 aa7.1□□□□□ -1.27
PRPF8-207ENST00000573681 IGLV7-46A0A075B6I9 117 aa7.08□□□□□ -1.28
PRPF8-207ENST00000573681 H7BZZ5 65 aa7.08□□□□□ -1.28
PRPF8-207ENST00000573681 TMEM258P61165 79 aa7.08□□□□□ -1.28
PRPF8-207ENST00000573681 Q5W150 140 aa7.08□□□□□ -1.28
PRPF8-207ENST00000573681 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
PRPF8-207ENST00000573681 KRTAP13-3Q3SY46 172 aa7.06□□□□□ -1.28
PRPF8-207ENST00000573681 C20orf166-AS1Q96NR2 134 aa7.06□□□□□ -1.28
PRPF8-207ENST00000573681 FLG2Q5D862 2391 aaPredicted RBP7.06□□□□□ -1.28
PRPF8-207ENST00000573681 HERC2O95714 4834 aa7.06□□□□□ -1.28
PRPF8-207ENST00000573681 LOC101927531A0A1B0GV80 90 aa7.05□□□□□ -1.28
PRPF8-207ENST00000573681 A8MUU9 505 aa7.05□□□□□ -1.28
PRPF8-207ENST00000573681 J3QL48 77 aa7.02□□□□□ -1.29
PRPF8-207ENST00000573681 Q75L30 129 aa7.01□□□□□ -1.29
PRPF8-207ENST00000573681 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
PRPF8-207ENST00000573681 PRR4Q16378 134 aa7□□□□□ -1.29
PRPF8-207ENST00000573681 FAM236DA0A1B0GTK5 79 aa6.99□□□□□ -1.29
PRPF8-207ENST00000573681 FAM236CP0DP71 79 aa6.99□□□□□ -1.29
PRPF8-207ENST00000573681 CYP4F30PQ9H0H9 118 aa6.99□□□□□ -1.29
PRPF8-207ENST00000573681 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
PRPF8-207ENST00000573681 SPANXA2-OT1Q8N9U9 137 aa6.97□□□□□ -1.29
PRPF8-207ENST00000573681 DMBT1Q9UGM3 2413 aaPredicted RBP6.96□□□□□ -1.3
PRPF8-207ENST00000573681 SVIPQ8NHG7 77 aa6.95□□□□□ -1.3
PRPF8-207ENST00000573681 MYCBP2O75592 4640 aa6.94□□□□□ -1.3
PRPF8-207ENST00000573681 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
PRPF8-207ENST00000573681 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
PRPF8-207ENST00000573681 PCOTHQ58A44 107 aa6.93□□□□□ -1.3
PRPF8-207ENST00000573681 ATP11AUNQ6ZP68 121 aa6.93□□□□□ -1.3
PRPF8-207ENST00000573681 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
PRPF8-207ENST00000573681 RPS28P62857 69 aaKnown RBP6.92□□□□□ -1.3
PRPF8-207ENST00000573681 XP32Q5T750 250 aa6.92□□□□□ -1.3
PRPF8-207ENST00000573681 IGKV2D-30A0A075B6S6 120 aa6.89□□□□□ -1.31
PRPF8-207ENST00000573681 C7orf65Q6ZTY9 151 aa6.89□□□□□ -1.31
PRPF8-207ENST00000573681 SERP1Q9Y6X1 66 aa6.88□□□□□ -1.31
PRPF8-207ENST00000573681 HRES1P13985 223 aa6.86□□□□□ -1.31
PRPF8-207ENST00000573681 SPINK7P58062 85 aa6.83□□□□□ -1.32
PRPF8-207ENST00000573681 LCE2BO14633 110 aa6.81□□□□□ -1.32
PRPF8-207ENST00000573681 ACYP2P14621 99 aa6.78□□□□□ -1.32
PRPF8-207ENST00000573681 DMAC1Q96GE9 116 aa6.76□□□□□ -1.33
PRPF8-207ENST00000573681 A8MUN3 132 aa6.74□□□□□ -1.33
PRPF8-207ENST00000573681 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
PRPF8-207ENST00000573681 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
PRPF8-207ENST00000573681 COA5Q86WW8 74 aa6.72□□□□□ -1.33
PRPF8-207ENST00000573681 C4orf26Q17RF5 130 aa6.71□□□□□ -1.34
PRPF8-207ENST00000573681 COX6B2Q6YFQ2 88 aa6.68□□□□□ -1.34
PRPF8-207ENST00000573681 PCLOQ9Y6V0 5065 aa6.67□□□□□ -1.34
PRPF8-207ENST00000573681 CHKB-CPT1BH3BT56 60 aa6.65□□□□□ -1.34
PRPF8-207ENST00000573681 KRTAP3-1Q9BYR8 98 aa6.62□□□□□ -1.35
PRPF8-207ENST00000573681 LPAP08519 4548 aa6.6□□□□□ -1.35
PRPF8-207ENST00000573681 LRP2P98164 4655 aa6.6□□□□□ -1.35
PRPF8-207ENST00000573681 V9GYY9 64 aa6.6□□□□□ -1.35
PRPF8-207ENST00000573681 RBM12B-AS1Q9P1G2 102 aa6.58□□□□□ -1.36
PRPF8-207ENST00000573681 Q1T7F1 81 aa6.57□□□□□ -1.36
PRPF8-207ENST00000573681 SPTSSBQ8NFR3 76 aa6.57□□□□□ -1.36
PRPF8-207ENST00000573681 MPLKIPQ8TAP9 179 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms