RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 SMR3BP02814 79 aaPredicted RBP7.37□□□□□ -1.23
PCDHGA9-201ENST00000573521 ITPR2Q14571 2701 aa7.36□□□□□ -1.23
PCDHGA9-201ENST00000573521 RPL37P61927 97 aaKnown RBP7.36□□□□□ -1.23
PCDHGA9-201ENST00000573521 S4R3F8 94 aa7.36□□□□□ -1.23
PCDHGA9-201ENST00000573521 MGAM2Q2M2H8 2515 aa7.35□□□□□ -1.23
PCDHGA9-201ENST00000573521 KRTAP1-5Q9BYS1 174 aa7.35□□□□□ -1.23
PCDHGA9-201ENST00000573521 TEP1Q99973 2627 aaKnown RBP7.32□□□□□ -1.24
PCDHGA9-201ENST00000573521 ROMO1P60602 79 aa7.32□□□□□ -1.24
PCDHGA9-201ENST00000573521 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
PCDHGA9-201ENST00000573521 SETXQ7Z333 2677 aaKnown RBP7.31□□□□□ -1.24
PCDHGA9-201ENST00000573521 NBEAL2Q6ZNJ1 2754 aa7.31□□□□□ -1.24
PCDHGA9-201ENST00000573521 NIPBLQ6KC79 2804 aaeCLIP7.29□□□□□ -1.24
PCDHGA9-201ENST00000573521 TENM4Q6N022 2769 aa7.27□□□□□ -1.25
PCDHGA9-201ENST00000573521 CAMK2N1Q7Z7J9 78 aa7.27□□□□□ -1.25
PCDHGA9-201ENST00000573521 GCN1Q92616 2671 aaKnown RBP7.27□□□□□ -1.25
PCDHGA9-201ENST00000573521 KRTAP21-3Q3LHN1 58 aa7.27□□□□□ -1.25
PCDHGA9-201ENST00000573521 PRAC1Q96KF2 57 aa7.26□□□□□ -1.25
PCDHGA9-201ENST00000573521 ZNF469Q96JG9 3925 aaPredicted RBP7.25□□□□□ -1.25
PCDHGA9-201ENST00000573521 SEC61BP60468 96 aaKnown RBP7.24□□□□□ -1.25
PCDHGA9-201ENST00000573521 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
PCDHGA9-201ENST00000573521 A6NN06 94 aa7.24□□□□□ -1.25
PCDHGA9-201ENST00000573521 COL6A5A8TX70 2615 aa7.24□□□□□ -1.25
PCDHGA9-201ENST00000573521 NBPF19A0A087WUL8 3843 aa7.23□□□□□ -1.25
PCDHGA9-201ENST00000573521 KRTAP13-1Q8IUC0 172 aa7.22□□□□□ -1.25
PCDHGA9-201ENST00000573521 STAB1Q9NY15 2570 aa7.21□□□□□ -1.26
PCDHGA9-201ENST00000573521 PDZD2O15018 2839 aa7.19□□□□□ -1.26
PCDHGA9-201ENST00000573521 R4GN34 69 aa7.18□□□□□ -1.26
PCDHGA9-201ENST00000573521 H3BS24 57 aa7.16□□□□□ -1.26
PCDHGA9-201ENST00000573521 Q6ZRN7 208 aaPredicted RBP7.16□□□□□ -1.26
PCDHGA9-201ENST00000573521 KRTAP10-1P60331 282 aa7.15□□□□□ -1.26
PCDHGA9-201ENST00000573521 PANO1I0J062 215 aa7.14□□□□□ -1.27
PCDHGA9-201ENST00000573521 KRTAP7-1Q8IUC3 87 aa7.13□□□□□ -1.27
PCDHGA9-201ENST00000573521 HIVEP1P15822 2718 aa7.11□□□□□ -1.27
PCDHGA9-201ENST00000573521 NOTCH2NLQ7Z3S9 236 aa7.11□□□□□ -1.27
PCDHGA9-201ENST00000573521 KMT2BQ9UMN6 2715 aaPredicted RBP7.1□□□□□ -1.27
PCDHGA9-201ENST00000573521 M0QZ58 72 aa7.09□□□□□ -1.27
PCDHGA9-201ENST00000573521 VWFP04275 2813 aa7.08□□□□□ -1.28
PCDHGA9-201ENST00000573521 KRTAP10-2P60368 255 aa7.07□□□□□ -1.28
PCDHGA9-201ENST00000573521 KRTAP25-1Q3LHN0 102 aa7.07□□□□□ -1.28
PCDHGA9-201ENST00000573521 AKAP9Q99996 3911 aa7.06□□□□□ -1.28
PCDHGA9-201ENST00000573521 NSD1Q96L73 2696 aaPredicted RBP7.06□□□□□ -1.28
PCDHGA9-201ENST00000573521 ANK3Q12955 4377 aaKnown RBP7.06□□□□□ -1.28
PCDHGA9-201ENST00000573521 OTOGQ6ZRI0 2925 aa7.05□□□□□ -1.28
PCDHGA9-201ENST00000573521 TENM1Q9UKZ4 2725 aa7.04□□□□□ -1.28
PCDHGA9-201ENST00000573521 NBEAL1Q6ZS30 2694 aa7.01□□□□□ -1.29
PCDHGA9-201ENST00000573521 KRTAP11-1Q8IUC1 163 aa7.01□□□□□ -1.29
PCDHGA9-201ENST00000573521 NOTCH1P46531 2555 aa7.01□□□□□ -1.29
PCDHGA9-201ENST00000573521 Q5VSD8 79 aa7.01□□□□□ -1.29
PCDHGA9-201ENST00000573521 A8MUU9 505 aa6.96□□□□□ -1.3
PCDHGA9-201ENST00000573521 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
PCDHGA9-201ENST00000573521 KRTAP13-2Q52LG2 175 aa6.95□□□□□ -1.3
PCDHGA9-201ENST00000573521 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
PCDHGA9-201ENST00000573521 TRRAPQ9Y4A5 3859 aa6.92□□□□□ -1.3
PCDHGA9-201ENST00000573521 DMBT1Q9UGM3 2413 aaPredicted RBP6.91□□□□□ -1.3
PCDHGA9-201ENST00000573521 M0R2T5 61 aa6.89□□□□□ -1.31
PCDHGA9-201ENST00000573521 KRTAP16-1A8MUX0 517 aa6.87□□□□□ -1.31
PCDHGA9-201ENST00000573521 PLAC4Q8WY50 150 aa6.85□□□□□ -1.31
PCDHGA9-201ENST00000573521 PKD1L1Q8TDX9 2849 aa6.82□□□□□ -1.32
PCDHGA9-201ENST00000573521 TENM3Q9P273 2699 aa6.82□□□□□ -1.32
PCDHGA9-201ENST00000573521 PP632Q6XCG6 107 aa6.81□□□□□ -1.32
PCDHGA9-201ENST00000573521 FLG2Q5D862 2391 aaPredicted RBP6.81□□□□□ -1.32
PCDHGA9-201ENST00000573521 FBN1P35555 2871 aaKnown RBP6.78□□□□□ -1.32
PCDHGA9-201ENST00000573521 A8MU10 97 aa6.76□□□□□ -1.33
PCDHGA9-201ENST00000573521 STAB2Q8WWQ8 2551 aa6.71□□□□□ -1.34
PCDHGA9-201ENST00000573521 KRTAP1-4P0C5Y4 121 aa6.7□□□□□ -1.34
PCDHGA9-201ENST00000573521 TNP1P09430 55 aa6.67□□□□□ -1.34
PCDHGA9-201ENST00000573521 NDUFAF8A1L188 74 aa6.6□□□□□ -1.35
PCDHGA9-201ENST00000573521 KRTAP13-3Q3SY46 172 aa6.6□□□□□ -1.35
PCDHGA9-201ENST00000573521 H0YAA0 97 aa6.58□□□□□ -1.36
PCDHGA9-201ENST00000573521 TPRXLQ17RH7 258 aa6.54□□□□□ -1.36
PCDHGA9-201ENST00000573521 XP32Q5T750 250 aa6.53□□□□□ -1.36
PCDHGA9-201ENST00000573521 P0C880 135 aa6.5□□□□□ -1.37
PCDHGA9-201ENST00000573521 TENM2Q9NT68 2774 aa6.5□□□□□ -1.37
PCDHGA9-201ENST00000573521 ANK2Q01484 3957 aa6.49□□□□□ -1.37
PCDHGA9-201ENST00000573521 HUWE1Q7Z6Z7 4374 aaKnown RBP6.42□□□□□ -1.38
PCDHGA9-201ENST00000573521 CSMD3Q7Z407 3707 aa6.39□□□□□ -1.39
PCDHGA9-201ENST00000573521 CMYA5Q8N3K9 4069 aa6.37□□□□□ -1.39
PCDHGA9-201ENST00000573521 SRRM2Q9UQ35 2752 aaKnown RBP6.36□□□□□ -1.39
PCDHGA9-201ENST00000573521 COL7A1Q02388 2944 aa6.35□□□□□ -1.39
PCDHGA9-201ENST00000573521 C10orf95Q9H7T3 257 aa6.33□□□□□ -1.4
PCDHGA9-201ENST00000573521 DNAH10Q8IVF4 4471 aa6.31□□□□□ -1.4
PCDHGA9-201ENST00000573521 KRTAP10-8P60410 259 aa6.3□□□□□ -1.4
PCDHGA9-201ENST00000573521 DNAH3Q8TD57 4116 aa6.27□□□□□ -1.41
PCDHGA9-201ENST00000573521 LYSTQ99698 3801 aa6.26□□□□□ -1.41
PCDHGA9-201ENST00000573521 TGP01266 2768 aa6.26□□□□□ -1.41
PCDHGA9-201ENST00000573521 DNAH9Q9NYC9 4486 aa6.25□□□□□ -1.41
PCDHGA9-201ENST00000573521 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
PCDHGA9-201ENST00000573521 A0A1B0GVY2 172 aa6.19□□□□□ -1.42
PCDHGA9-201ENST00000573521 PLECQ15149 4684 aaKnown RBP6.18□□□□□ -1.42
PCDHGA9-201ENST00000573521 DNAH1Q9P2D7 4330 aa6.18□□□□□ -1.42
PCDHGA9-201ENST00000573521 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
PCDHGA9-201ENST00000573521 DNAH7Q8WXX0 4024 aa6.13□□□□□ -1.43
PCDHGA9-201ENST00000573521 MEGF8Q7Z7M0 2845 aa6.12□□□□□ -1.43
PCDHGA9-201ENST00000573521 KRTAP12-1P59990 96 aa6.09□□□□□ -1.43
PCDHGA9-201ENST00000573521 STARD9Q9P2P6 4700 aa6.08□□□□□ -1.44
PCDHGA9-201ENST00000573521 FBN3Q75N90 2809 aa6.07□□□□□ -1.44
PCDHGA9-201ENST00000573521 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
PCDHGA9-201ENST00000573521 KRTAP12-2P59991 146 aa6.06□□□□□ -1.44
PCDHGA9-201ENST00000573521 PRKDCP78527 4128 aaKnown RBP6.05□□□□□ -1.44
PCDHGA9-201ENST00000573521 KMT2AQ03164 3969 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms