RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
NUP88-206ENST00000573169 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.16□□□□□ -1.74
NUP88-206ENST00000573169 LRCOL1A6NCL2 159 aa4.16□□□□□ -1.74
NUP88-206ENST00000573169 Q5VSD8 79 aa4.16□□□□□ -1.74
NUP88-206ENST00000573169 NKAPP1Q8N9T2 125 aa4.16□□□□□ -1.74
NUP88-206ENST00000573169 SPANXA2-OT1Q8N9U9 137 aa4.16□□□□□ -1.74
NUP88-206ENST00000573169 Q9BRP9 147 aa4.16□□□□□ -1.74
NUP88-206ENST00000573169 PKIGQ9Y2B9 76 aa4.16□□□□□ -1.74
NUP88-206ENST00000573169 MYCBP2O75592 4640 aa4.15□□□□□ -1.74
NUP88-206ENST00000573169 SERTAD4-AS1Q5TG53 156 aa4.15□□□□□ -1.75
NUP88-206ENST00000573169 MPLKIPQ8TAP9 179 aa4.15□□□□□ -1.75
NUP88-206ENST00000573169 IGLV5-52A0A0A0MRZ9 124 aa4.14□□□□□ -1.75
NUP88-206ENST00000573169 RPL37AP8A6NKH3 93 aa4.14□□□□□ -1.75
NUP88-206ENST00000573169 HCG22E2RYF7 251 aa4.14□□□□□ -1.75
NUP88-206ENST00000573169 PSCAO43653 123 aa4.14□□□□□ -1.75
NUP88-206ENST00000573169 KRTAP29-1A8MX34 341 aaPredicted RBP4.13□□□□□ -1.75
NUP88-206ENST00000573169 K7EQZ3 153 aa4.13□□□□□ -1.75
NUP88-206ENST00000573169 TRAV22A0A0B4J277 110 aa4.12□□□□□ -1.75
NUP88-206ENST00000573169 KRTAP7-1Q8IUC3 87 aa4.12□□□□□ -1.75
NUP88-206ENST00000573169 MP68P56378 58 aa4.11□□□□□ -1.75
NUP88-206ENST00000573169 SEC61GP60059 68 aa4.11□□□□□ -1.75
NUP88-206ENST00000573169 KRTAP15-1Q3LI76 137 aa4.11□□□□□ -1.75
NUP88-206ENST00000573169 ST20-AS1Q8NBB2 130 aa4.11□□□□□ -1.75
NUP88-206ENST00000573169 DEFB105AQ8NG35 78 aa4.11□□□□□ -1.75
NUP88-206ENST00000573169 IGKV2D-24A0A075B6R9 120 aa4.1□□□□□ -1.75
NUP88-206ENST00000573169 SPRR1BP22528 89 aa4.1□□□□□ -1.75
NUP88-206ENST00000573169 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
NUP88-206ENST00000573169 LIMD2Q9BT23 127 aa4.1□□□□□ -1.75
NUP88-206ENST00000573169 IGFL1Q6UW32 110 aa4.09□□□□□ -1.75
NUP88-206ENST00000573169 MRPL55Q7Z7F7 128 aaKnown RBP4.09□□□□□ -1.75
NUP88-206ENST00000573169 C9orf163Q8N9P6 203 aa4.09□□□□□ -1.75
NUP88-206ENST00000573169 SRRM2Q9UQ35 2752 aaKnown RBP4.09□□□□□ -1.75
NUP88-206ENST00000573169 LOC101927531A0A1B0GV80 90 aa4.08□□□□□ -1.76
NUP88-206ENST00000573169 H0Y9J4 135 aa4.08□□□□□ -1.76
NUP88-206ENST00000573169 FLG2Q5D862 2391 aaPredicted RBP4.08□□□□□ -1.76
NUP88-206ENST00000573169 Q5VV11 94 aa4.08□□□□□ -1.76
NUP88-206ENST00000573169 REG3GQ6UW15 175 aa4.08□□□□□ -1.76
NUP88-206ENST00000573169 Q8N9P0 234 aaPredicted RBP4.08□□□□□ -1.76
NUP88-206ENST00000573169 UBE2BP63146 152 aa4.07□□□□□ -1.76
NUP88-206ENST00000573169 Q6ZSA8 131 aa4.07□□□□□ -1.76
NUP88-206ENST00000573169 DMBT1Q9UGM3 2413 aaPredicted RBP4.06□□□□□ -1.76
NUP88-206ENST00000573169 FAM168BA1KXE4 195 aa4.06□□□□□ -1.76
NUP88-206ENST00000573169 ASB16-AS1Q495Z4 193 aa4.06□□□□□ -1.76
NUP88-206ENST00000573169 LINC00208Q96KT6 92 aa4.06□□□□□ -1.76
NUP88-206ENST00000573169 LINC00472Q9H8W2 130 aa4.06□□□□□ -1.76
NUP88-206ENST00000573169 FAT3Q8TDW7 4589 aa4.05□□□□□ -1.76
NUP88-206ENST00000573169 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
NUP88-206ENST00000573169 IGLV7-46A0A075B6I9 117 aa4.05□□□□□ -1.76
NUP88-206ENST00000573169 A8MUN3 132 aa4.05□□□□□ -1.76
NUP88-206ENST00000573169 A8MWP4 228 aa4.05□□□□□ -1.76
NUP88-206ENST00000573169 UBE2AP49459 152 aa4.05□□□□□ -1.76
NUP88-206ENST00000573169 CNBPP62633 177 aaKnown RBP4.05□□□□□ -1.76
NUP88-206ENST00000573169 Q75L30 129 aa4.05□□□□□ -1.76
NUP88-206ENST00000573169 PLAC8Q9NZF1 115 aa4.05□□□□□ -1.76
NUP88-206ENST00000573169 LRP1Q07954 4544 aaKnown RBP4.05□□□□□ -1.76
NUP88-206ENST00000573169 H0Y9P7 68 aa4.04□□□□□ -1.76
NUP88-206ENST00000573169 KRTAP10-4P60372 401 aaPredicted RBP4.04□□□□□ -1.76
NUP88-206ENST00000573169 CD164Q04900 197 aa4.04□□□□□ -1.76
NUP88-206ENST00000573169 CASC2Q6XLA1 102 aa4.04□□□□□ -1.76
NUP88-206ENST00000573169 CIRBP-AS1Q8TBR5 109 aa4.04□□□□□ -1.76
NUP88-206ENST00000573169 HMCN2Q8NDA2 5059 aa4.04□□□□□ -1.76
NUP88-206ENST00000573169 PSPHP1O15172 72 aa4.03□□□□□ -1.76
NUP88-206ENST00000573169 ATP11AUNQ6ZP68 121 aa4.03□□□□□ -1.76
NUP88-206ENST00000573169 A0A087WSZ3 146 aa4.02□□□□□ -1.77
NUP88-206ENST00000573169 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
NUP88-206ENST00000573169 TP53AIP1Q9HCN2 124 aa4.02□□□□□ -1.77
NUP88-206ENST00000573169 MMP24-AS1A0A0U1RRL7 71 aa4.01□□□□□ -1.77
NUP88-206ENST00000573169 PANO1I0J062 215 aa4.01□□□□□ -1.77
NUP88-206ENST00000573169 PHF5AQ7RTV0 110 aaKnown RBP4.01□□□□□ -1.77
NUP88-206ENST00000573169 WFDC13Q8IUB5 93 aa4.01□□□□□ -1.77
NUP88-206ENST00000573169 RPL37AP61513 92 aaKnown RBP4□□□□□ -1.77
NUP88-206ENST00000573169 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
NUP88-206ENST00000573169 LINC01558Q9Y6Z2 57 aa4□□□□□ -1.77
NUP88-206ENST00000573169 NDUFS5O43920 106 aa3.99□□□□□ -1.77
NUP88-206ENST00000573169 PRR4Q16378 134 aa3.99□□□□□ -1.77
NUP88-206ENST00000573169 COA5Q86WW8 74 aa3.99□□□□□ -1.77
NUP88-206ENST00000573169 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
NUP88-206ENST00000573169 A0A1W2PNN7 141 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 A6NN06 94 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 MOBPQ13875 183 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 C14orf177Q52M58 125 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 LCA10Q71F78 164 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 KRTAP13-1Q8IUC0 172 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 PRR15LQ9BU68 103 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 CDC42SE1Q9NRR8 79 aa3.98□□□□□ -1.77
NUP88-206ENST00000573169 A0A096LNI7 61 aa3.97□□□□□ -1.77
NUP88-206ENST00000573169 CHTF8P0CG12 524 aa3.97□□□□□ -1.77
NUP88-206ENST00000573169 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
NUP88-206ENST00000573169 PRLHP81277 87 aa3.96□□□□□ -1.78
NUP88-206ENST00000573169 DEFB116Q30KQ4 102 aa3.96□□□□□ -1.78
NUP88-206ENST00000573169 Q96NJ1 140 aa3.96□□□□□ -1.78
NUP88-206ENST00000573169 A8MU10 97 aa3.95□□□□□ -1.78
NUP88-206ENST00000573169 A0A087X002 238 aa3.94□□□□□ -1.78
NUP88-206ENST00000573169 MT1HL1P0DM35 61 aa3.94□□□□□ -1.78
NUP88-206ENST00000573169 LINC00483Q53H64 154 aa3.94□□□□□ -1.78
NUP88-206ENST00000573169 KRTAP11-1Q8IUC1 163 aa3.93□□□□□ -1.78
NUP88-206ENST00000573169 C8orf17Q9NRJ1 99 aa3.93□□□□□ -1.78
NUP88-206ENST00000573169 IGKV2-24A0A0C4DH68 120 aa3.92□□□□□ -1.78
NUP88-206ENST00000573169 A6NED7 52 aa3.92□□□□□ -1.78
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