RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 DEFB136Q30KP8 78 aa0.92□□□□□ -2.26
TVP23B-205ENST00000572845 KRTAP21-3Q3LHN1 58 aa0.92□□□□□ -2.26
TVP23B-205ENST00000572845 SPINK6Q6UWN8 80 aa0.92□□□□□ -2.26
TVP23B-205ENST00000572845 USP9YO00507 2555 aaPredicted RBP0.92□□□□□ -2.26
TVP23B-205ENST00000572845 TNRC18O15417 2968 aaPredicted RBP0.91□□□□□ -2.26
TVP23B-205ENST00000572845 A0A096LNI7 61 aa0.91□□□□□ -2.26
TVP23B-205ENST00000572845 TENM4Q6N022 2769 aa0.91□□□□□ -2.26
TVP23B-205ENST00000572845 USP24Q9UPU5 2620 aa0.91□□□□□ -2.26
TVP23B-205ENST00000572845 RIF1Q5UIP0 2472 aaKnown RBP0.91□□□□□ -2.26
TVP23B-205ENST00000572845 CHD8Q9HCK8 2581 aa0.91□□□□□ -2.26
TVP23B-205ENST00000572845 MGAQ8IWI9 3026 aa0.9□□□□□ -2.27
TVP23B-205ENST00000572845 KRTAP2-3P0C7H8 128 aa0.9□□□□□ -2.27
TVP23B-205ENST00000572845 KRTAP2-4Q9BYR9 128 aa0.9□□□□□ -2.27
TVP23B-205ENST00000572845 KRTAP2-1Q9BYU5 128 aa0.9□□□□□ -2.27
TVP23B-205ENST00000572845 EPG5Q9HCE0 2579 aa0.9□□□□□ -2.27
TVP23B-205ENST00000572845 NCOR2Q9Y618 2525 aa0.89□□□□□ -2.27
TVP23B-205ENST00000572845 GCN1Q92616 2671 aaKnown RBP0.89□□□□□ -2.27
TVP23B-205ENST00000572845 COX14Q96I36 57 aa0.89□□□□□ -2.27
TVP23B-205ENST00000572845 CELSR1Q9NYQ6 3014 aa0.89□□□□□ -2.27
TVP23B-205ENST00000572845 FAM186AA6NE01 2351 aa0.89□□□□□ -2.27
TVP23B-205ENST00000572845 HIVEP3Q5T1R4 2406 aa0.88□□□□□ -2.27
TVP23B-205ENST00000572845 VPS13DQ5THJ4 4388 aa0.88□□□□□ -2.27
TVP23B-205ENST00000572845 SPART-AS1P0CW21 52 aa0.88□□□□□ -2.27
TVP23B-205ENST00000572845 SMR3AQ99954 134 aa0.88□□□□□ -2.27
TVP23B-205ENST00000572845 DNAH11Q96DT5 4516 aa0.88□□□□□ -2.27
TVP23B-205ENST00000572845 CSMD3Q7Z407 3707 aa0.87□□□□□ -2.27
TVP23B-205ENST00000572845 PDZD2O15018 2839 aa0.87□□□□□ -2.27
TVP23B-205ENST00000572845 TNXBP22105 4242 aa0.87□□□□□ -2.27
TVP23B-205ENST00000572845 H3BNG1 76 aa0.86□□□□□ -2.27
TVP23B-205ENST00000572845 LRRK2Q5S007 2527 aa0.85□□□□□ -2.27
TVP23B-205ENST00000572845 C9orf92A6NGG3 77 aa0.85□□□□□ -2.27
TVP23B-205ENST00000572845 DEFB110Q30KQ9 67 aa0.85□□□□□ -2.27
TVP23B-205ENST00000572845 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
TVP23B-205ENST00000572845 DEFB108BQ8NET1 73 aa0.85□□□□□ -2.27
TVP23B-205ENST00000572845 ITPR3Q14573 2671 aa0.85□□□□□ -2.27
TVP23B-205ENST00000572845 PTPN13Q12923 2485 aa0.84□□□□□ -2.27
TVP23B-205ENST00000572845 FLNCQ14315 2725 aa0.84□□□□□ -2.27
TVP23B-205ENST00000572845 SPG11Q96JI7 2443 aa0.84□□□□□ -2.27
TVP23B-205ENST00000572845 PRM1P04553 51 aa0.84□□□□□ -2.27
TVP23B-205ENST00000572845 CACNA1AO00555 2505 aa0.84□□□□□ -2.28
TVP23B-205ENST00000572845 MTORP42345 2549 aa0.83□□□□□ -2.28
TVP23B-205ENST00000572845 FBN2P35556 2912 aa0.83□□□□□ -2.28
TVP23B-205ENST00000572845 DEFB124Q8NES8 71 aa0.83□□□□□ -2.28
TVP23B-205ENST00000572845 STAB1Q9NY15 2570 aa0.83□□□□□ -2.28
TVP23B-205ENST00000572845 ANKHD1Q8IWZ3 2542 aaKnown RBP0.82□□□□□ -2.28
TVP23B-205ENST00000572845 UTP20O75691 2785 aaKnown RBP0.82□□□□□ -2.28
TVP23B-205ENST00000572845 ACANP16112 2415 aa0.81□□□□□ -2.28
TVP23B-205ENST00000572845 SACSQ9NZJ4 4579 aa0.81□□□□□ -2.28
TVP23B-205ENST00000572845 APCP25054 2843 aa0.81□□□□□ -2.28
TVP23B-205ENST00000572845 MYCBP2O75592 4640 aa0.81□□□□□ -2.28
TVP23B-205ENST00000572845 NF1P21359 2839 aa0.8□□□□□ -2.28
TVP23B-205ENST00000572845 PRKDCP78527 4128 aaKnown RBP0.79□□□□□ -2.28
TVP23B-205ENST00000572845 A0A096LPF7 62 aa0.79□□□□□ -2.28
TVP23B-205ENST00000572845 LYSTQ99698 3801 aa0.79□□□□□ -2.28
TVP23B-205ENST00000572845 U3KQA8 63 aa0.79□□□□□ -2.28
TVP23B-205ENST00000572845 WDR87Q6ZQQ6 2873 aa0.79□□□□□ -2.28
TVP23B-205ENST00000572845 VPS13BQ7Z7G8 4022 aa0.79□□□□□ -2.28
TVP23B-205ENST00000572845 ZFYVE26Q68DK2 2539 aa0.79□□□□□ -2.28
TVP23B-205ENST00000572845 NSD1Q96L73 2696 aaPredicted RBP0.79□□□□□ -2.28
TVP23B-205ENST00000572845 ACACBO00763 2458 aa0.78□□□□□ -2.28
TVP23B-205ENST00000572845 SETXQ7Z333 2677 aaKnown RBP0.78□□□□□ -2.28
TVP23B-205ENST00000572845 HIVEP1P15822 2718 aa0.78□□□□□ -2.29
TVP23B-205ENST00000572845 NOTCH1P46531 2555 aa0.77□□□□□ -2.29
TVP23B-205ENST00000572845 NBEAL2Q6ZNJ1 2754 aa0.77□□□□□ -2.29
TVP23B-205ENST00000572845 KRTAP19-3Q7Z4W3 81 aa0.77□□□□□ -2.29
TVP23B-205ENST00000572845 KRTAP8-1Q8IUC2 63 aa0.77□□□□□ -2.29
TVP23B-205ENST00000572845 TLN2Q9Y4G6 2542 aa0.77□□□□□ -2.29
TVP23B-205ENST00000572845 ZNF469Q96JG9 3925 aaPredicted RBP0.77□□□□□ -2.29
TVP23B-205ENST00000572845 ANK2Q01484 3957 aa0.77□□□□□ -2.29
TVP23B-205ENST00000572845 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
TVP23B-205ENST00000572845 KMT2AQ03164 3969 aa0.76□□□□□ -2.29
TVP23B-205ENST00000572845 UNC79Q9P2D8 2635 aa0.76□□□□□ -2.29
TVP23B-205ENST00000572845 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
TVP23B-205ENST00000572845 USP9XQ93008 2570 aaPredicted RBP0.76□□□□□ -2.29
TVP23B-205ENST00000572845 SONP18583 2426 aaKnown RBP0.75□□□□□ -2.29
TVP23B-205ENST00000572845 BSNQ9UPA5 3926 aa0.75□□□□□ -2.29
TVP23B-205ENST00000572845 ITPR1Q14643 2758 aa0.75□□□□□ -2.29
TVP23B-205ENST00000572845 COL7A1Q02388 2944 aa0.75□□□□□ -2.29
TVP23B-205ENST00000572845 ANKRD11Q6UB99 2663 aaPredicted RBP0.74□□□□□ -2.29
TVP23B-205ENST00000572845 FAT2Q9NYQ8 4349 aa0.74□□□□□ -2.29
TVP23B-205ENST00000572845 TACC2O95359 2948 aa0.74□□□□□ -2.29
TVP23B-205ENST00000572845 DCHS2Q6V1P9 2916 aa0.74□□□□□ -2.29
TVP23B-205ENST00000572845 DYNC2H1Q8NCM8 4307 aaKnown RBP0.74□□□□□ -2.29
TVP23B-205ENST00000572845 COL12A1Q99715 3063 aa0.74□□□□□ -2.29
TVP23B-205ENST00000572845 DNAH8Q96JB1 4490 aa0.74□□□□□ -2.29
TVP23B-205ENST00000572845 FLNBO75369 2602 aaKnown RBP0.73□□□□□ -2.29
TVP23B-205ENST00000572845 ZZEF1O43149 2961 aa0.73□□□□□ -2.29
TVP23B-205ENST00000572845 LINC01556Q5JQF7 62 aa0.73□□□□□ -2.29
TVP23B-205ENST00000572845 TEP1Q99973 2627 aaKnown RBP0.73□□□□□ -2.29
TVP23B-205ENST00000572845 ZFHX4Q86UP3 3567 aa0.73□□□□□ -2.29
TVP23B-205ENST00000572845 DNAH2Q9P225 4427 aa0.73□□□□□ -2.29
TVP23B-205ENST00000572845 NBPF19A0A087WUL8 3843 aa0.72□□□□□ -2.29
TVP23B-205ENST00000572845 FRYQ5TBA9 3013 aa0.72□□□□□ -2.29
TVP23B-205ENST00000572845 DMXL1Q9Y485 3027 aa0.72□□□□□ -2.29
TVP23B-205ENST00000572845 DEFB133Q30KQ1 61 aa0.72□□□□□ -2.29
TVP23B-205ENST00000572845 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
TVP23B-205ENST00000572845 MYO18BQ8IUG5 2567 aa0.72□□□□□ -2.29
TVP23B-205ENST00000572845 NIPBLQ6KC79 2804 aaeCLIP0.72□□□□□ -2.29
TVP23B-205ENST00000572845 PKD1L1Q8TDX9 2849 aa0.72□□□□□ -2.29
TVP23B-205ENST00000572845 FASNP49327 2511 aaKnown RBP0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms