RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 ADM2Q7Z4H4 148 aa9.92□□□□□ -0.82
LITAF-209ENST00000571688 UBE2DNLQ8IWF7 75 aa9.92□□□□□ -0.82
LITAF-209ENST00000571688 SPACA4Q8TDM5 124 aa9.9□□□□□ -0.82
LITAF-209ENST00000571688 NOTCH1P46531 2555 aa9.9□□□□□ -0.83
LITAF-209ENST00000571688 DNAH8Q96JB1 4490 aa9.89□□□□□ -0.83
LITAF-209ENST00000571688 SPATA8Q6RVD6 105 aa9.89□□□□□ -0.83
LITAF-209ENST00000571688 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.89□□□□□ -0.83
LITAF-209ENST00000571688 KRTAP24-1Q3LI83 254 aa9.88□□□□□ -0.83
LITAF-209ENST00000571688 DNAH7Q8WXX0 4024 aa9.88□□□□□ -0.83
LITAF-209ENST00000571688 NBEAL1Q6ZS30 2694 aa9.88□□□□□ -0.83
LITAF-209ENST00000571688 A0A1B0GU69 56 aa9.87□□□□□ -0.83
LITAF-209ENST00000571688 RTL8CO15255 209 aa9.87□□□□□ -0.83
LITAF-209ENST00000571688 DYNC2H1Q8NCM8 4307 aaKnown RBP9.87□□□□□ -0.83
LITAF-209ENST00000571688 ANAPC11Q9NYG5 84 aa9.87□□□□□ -0.83
LITAF-209ENST00000571688 FRAS1Q86XX4 4008 aa9.87□□□□□ -0.83
LITAF-209ENST00000571688 APLNQ9ULZ1 77 aa9.86□□□□□ -0.83
LITAF-209ENST00000571688 STAB1Q9NY15 2570 aa9.86□□□□□ -0.83
LITAF-209ENST00000571688 SPINK6Q6UWN8 80 aa9.85□□□□□ -0.83
LITAF-209ENST00000571688 COL6A5A8TX70 2615 aa9.85□□□□□ -0.83
LITAF-209ENST00000571688 LINC01554Q52M75 96 aa9.84□□□□□ -0.83
LITAF-209ENST00000571688 Q6ZRN7 208 aaPredicted RBP9.82□□□□□ -0.84
LITAF-209ENST00000571688 PSORS1C2Q9UIG4 136 aa9.82□□□□□ -0.84
LITAF-209ENST00000571688 IGLV5-52A0A0A0MRZ9 124 aa9.81□□□□□ -0.84
LITAF-209ENST00000571688 ZNF861PO60384 105 aa9.79□□□□□ -0.84
LITAF-209ENST00000571688 MIR22HGQ0VDD5 57 aa9.78□□□□□ -0.84
LITAF-209ENST00000571688 C4orf48Q5BLP8 95 aa9.78□□□□□ -0.84
LITAF-209ENST00000571688 NBDYA0A0U1RRE5 68 aa9.77□□□□□ -0.85
LITAF-209ENST00000571688 UQCR11O14957 56 aa9.77□□□□□ -0.85
LITAF-209ENST00000571688 HECTD4Q9Y4D8 3996 aa9.76□□□□□ -0.85
LITAF-209ENST00000571688 PLECQ15149 4684 aaKnown RBP9.76□□□□□ -0.85
LITAF-209ENST00000571688 FAM229AH3BQW9 127 aa9.75□□□□□ -0.85
LITAF-209ENST00000571688 IGKV2-30P06310 120 aa9.74□□□□□ -0.85
LITAF-209ENST00000571688 STAB2Q8WWQ8 2551 aa9.72□□□□□ -0.85
LITAF-209ENST00000571688 CIRBP-AS1Q8TBR5 109 aa9.7□□□□□ -0.86
LITAF-209ENST00000571688 RETNLBQ9BQ08 111 aa9.69□□□□□ -0.86
LITAF-209ENST00000571688 DNAH17Q9UFH2 4485 aa9.65□□□□□ -0.86
LITAF-209ENST00000571688 A0A087WTM6 91 aa9.64□□□□□ -0.87
LITAF-209ENST00000571688 CSAG1Q6PB30 78 aa9.63□□□□□ -0.87
LITAF-209ENST00000571688 VPS13DQ5THJ4 4388 aa9.63□□□□□ -0.87
LITAF-209ENST00000571688 SSBP3-AS1Q7Z2R9 100 aa9.62□□□□□ -0.87
LITAF-209ENST00000571688 IGLV7-43P04211 117 aa9.6□□□□□ -0.87
LITAF-209ENST00000571688 KRTAP16-1A8MUX0 517 aa9.59□□□□□ -0.87
LITAF-209ENST00000571688 H3BS24 57 aa9.54□□□□□ -0.88
LITAF-209ENST00000571688 IGKV2D-30A0A075B6S6 120 aa9.53□□□□□ -0.88
LITAF-209ENST00000571688 DNAH2Q9P225 4427 aa9.51□□□□□ -0.89
LITAF-209ENST00000571688 NUPR2A6NF83 97 aa9.51□□□□□ -0.89
LITAF-209ENST00000571688 STARD9Q9P2P6 4700 aa9.49□□□□□ -0.89
LITAF-209ENST00000571688 PRKDCP78527 4128 aaKnown RBP9.46□□□□□ -0.9
LITAF-209ENST00000571688 MEGF8Q7Z7M0 2845 aa9.45□□□□□ -0.9
LITAF-209ENST00000571688 MGAM2Q2M2H8 2515 aa9.45□□□□□ -0.9
LITAF-209ENST00000571688 DNAH11Q96DT5 4516 aa9.44□□□□□ -0.9
LITAF-209ENST00000571688 KRTAP13-2Q52LG2 175 aa9.44□□□□□ -0.9
LITAF-209ENST00000571688 KMT2AQ03164 3969 aa9.43□□□□□ -0.9
LITAF-209ENST00000571688 FBN3Q75N90 2809 aa9.41□□□□□ -0.9
LITAF-209ENST00000571688 SPINK1P00995 79 aa9.4□□□□□ -0.9
LITAF-209ENST00000571688 LY6G6CO95867 125 aa9.4□□□□□ -0.9
LITAF-209ENST00000571688 A8MUU9 505 aa9.39□□□□□ -0.91
LITAF-209ENST00000571688 H0YAA0 97 aa9.36□□□□□ -0.91
LITAF-209ENST00000571688 Q6ZSA8 131 aa9.36□□□□□ -0.91
LITAF-209ENST00000571688 TGP01266 2768 aa9.36□□□□□ -0.91
LITAF-209ENST00000571688 Q8N1X5 172 aa9.35□□□□□ -0.91
LITAF-209ENST00000571688 DNAH6Q9C0G6 4158 aa9.33□□□□□ -0.92
LITAF-209ENST00000571688 KRTAP25-1Q3LHN0 102 aa9.33□□□□□ -0.92
LITAF-209ENST00000571688 DNAH5Q8TE73 4624 aa9.32□□□□□ -0.92
LITAF-209ENST00000571688 C1orf134Q5TEV5 83 aa9.32□□□□□ -0.92
LITAF-209ENST00000571688 LINC00304Q8N9R0 145 aa9.31□□□□□ -0.92
LITAF-209ENST00000571688 TYMSOSQ8TAI1 123 aa9.26□□□□□ -0.93
LITAF-209ENST00000571688 KRTAP1-4P0C5Y4 121 aa9.24□□□□□ -0.93
LITAF-209ENST00000571688 ROMO1P60602 79 aa9.22□□□□□ -0.93
LITAF-209ENST00000571688 A0A1B0GU33 70 aa9.21□□□□□ -0.93
LITAF-209ENST00000571688 LRP1BQ9NZR2 4599 aa9.21□□□□□ -0.94
LITAF-209ENST00000571688 H1FX-AS1Q4G0G2 97 aa9.18□□□□□ -0.94
LITAF-209ENST00000571688 KRTAP10-2P60368 255 aa9.16□□□□□ -0.94
LITAF-209ENST00000571688 VPS13BQ7Z7G8 4022 aa9.13□□□□□ -0.95
LITAF-209ENST00000571688 KRTAP3-1Q9BYR8 98 aa9.12□□□□□ -0.95
LITAF-209ENST00000571688 PKD1P98161 4303 aa9.06□□□□□ -0.96
LITAF-209ENST00000571688 KRTAP10-1P60331 282 aa9.05□□□□□ -0.96
LITAF-209ENST00000571688 K7ERS5 55 aa9.02□□□□□ -0.97
LITAF-209ENST00000571688 CRIPTQ9P021 101 aa9.02□□□□□ -0.97
LITAF-209ENST00000571688 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
LITAF-209ENST00000571688 C20orf166-AS1Q96NR2 134 aa9□□□□□ -0.97
LITAF-209ENST00000571688 FLG2Q5D862 2391 aaPredicted RBP9□□□□□ -0.97
LITAF-209ENST00000571688 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
LITAF-209ENST00000571688 P0C880 135 aa8.97□□□□□ -0.97
LITAF-209ENST00000571688 SACSQ9NZJ4 4579 aa8.97□□□□□ -0.97
LITAF-209ENST00000571688 FAT2Q9NYQ8 4349 aa8.94□□□□□ -0.98
LITAF-209ENST00000571688 C9orf92A6NGG3 77 aa8.92□□□□□ -0.98
LITAF-209ENST00000571688 PKHD1L1Q86WI1 4243 aa8.84□□□□□ -0.99
LITAF-209ENST00000571688 RPL37P61927 97 aaKnown RBP8.83□□□□□ -1
LITAF-209ENST00000571688 HYDINQ4G0P3 5121 aa8.82□□□□□ -1
LITAF-209ENST00000571688 TPRXLQ17RH7 258 aa8.79□□□□□ -1
LITAF-209ENST00000571688 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
LITAF-209ENST00000571688 KRTAP13-4Q3LI77 160 aa8.76□□□□□ -1.01
LITAF-209ENST00000571688 SPINT4Q6UDR6 99 aa8.74□□□□□ -1.01
LITAF-209ENST00000571688 KRTAP3-3Q9BYR6 98 aa8.7□□□□□ -1.02
LITAF-209ENST00000571688 PKHD1P08F94 4074 aa8.69□□□□□ -1.02
LITAF-209ENST00000571688 A0A0D9SG42 100 aa8.69□□□□□ -1.02
LITAF-209ENST00000571688 KRTAP3-2Q9BYR7 98 aa8.68□□□□□ -1.02
LITAF-209ENST00000571688 APOBP04114 4563 aaKnown RBP8.68□□□□□ -1.02
LITAF-209ENST00000571688 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms