RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 C8orf17Q9NRJ1 99 aa11.17□□□□□ -0.62
RPAIN-210ENST00000571613 IGHV6-1A0A0B4J1U7 121 aa11.16□□□□□ -0.62
RPAIN-210ENST00000571613 hDV103S1A0JD37 113 aa11.15□□□□□ -0.62
RPAIN-210ENST00000571613 C8orf87E5RJ46 101 aa11.14□□□□□ -0.63
RPAIN-210ENST00000571613 HSPG2P98160 4391 aa11.13□□□□□ -0.63
RPAIN-210ENST00000571613 Q8N1X5 172 aa11.11□□□□□ -0.63
RPAIN-210ENST00000571613 RYR1P21817 5038 aa11.11□□□□□ -0.63
RPAIN-210ENST00000571613 PKHD1L1Q86WI1 4243 aa11.11□□□□□ -0.63
RPAIN-210ENST00000571613 TMEM254Q8TBM7 123 aa11.08□□□□□ -0.64
RPAIN-210ENST00000571613 C20orf197Q8N268 126 aa11.08□□□□□ -0.64
RPAIN-210ENST00000571613 C5orf47Q569G3 176 aa11.07□□□□□ -0.64
RPAIN-210ENST00000571613 MRPL34Q9BQ48 92 aaKnown RBP11.05□□□□□ -0.64
RPAIN-210ENST00000571613 TP53AIP1Q9HCN2 124 aa11.05□□□□□ -0.64
RPAIN-210ENST00000571613 KLKP1Q107X0 134 aa11.04□□□□□ -0.64
RPAIN-210ENST00000571613 LINC00313P59037 77 aa11.04□□□□□ -0.64
RPAIN-210ENST00000571613 KRTAP10-8P60410 259 aa11.01□□□□□ -0.65
RPAIN-210ENST00000571613 NDUFC1O43677 76 aa10.99□□□□□ -0.65
RPAIN-210ENST00000571613 MP68P56378 58 aa10.99□□□□□ -0.65
RPAIN-210ENST00000571613 NOTCH2NLQ7Z3S9 236 aa10.99□□□□□ -0.65
RPAIN-210ENST00000571613 A0A0U1RQV1 116 aa10.96□□□□□ -0.65
RPAIN-210ENST00000571613 H3BPC8 53 aa10.96□□□□□ -0.65
RPAIN-210ENST00000571613 NDUFS5O43920 106 aa10.96□□□□□ -0.65
RPAIN-210ENST00000571613 SNURFQ9Y675 71 aa10.95□□□□□ -0.66
RPAIN-210ENST00000571613 EPPK1P58107 5090 aaKnown RBP10.93□□□□□ -0.66
RPAIN-210ENST00000571613 KIAA1109Q2LD37 5005 aa10.92□□□□□ -0.66
RPAIN-210ENST00000571613 TRAV22A0A0B4J277 110 aa10.92□□□□□ -0.66
RPAIN-210ENST00000571613 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
RPAIN-210ENST00000571613 H0Y9P7 68 aa10.91□□□□□ -0.66
RPAIN-210ENST00000571613 TMEM258P61165 79 aa10.91□□□□□ -0.66
RPAIN-210ENST00000571613 CYSTM1Q9H1C7 97 aa10.89□□□□□ -0.67
RPAIN-210ENST00000571613 Q8N9P0 234 aaPredicted RBP10.89□□□□□ -0.67
RPAIN-210ENST00000571613 H7BZZ5 65 aa10.87□□□□□ -0.67
RPAIN-210ENST00000571613 OXTP01178 125 aa10.86□□□□□ -0.67
RPAIN-210ENST00000571613 ZCCHC13Q8WW36 166 aaKnown RBP10.86□□□□□ -0.67
RPAIN-210ENST00000571613 KRTAP16-1A8MUX0 517 aa10.85□□□□□ -0.67
RPAIN-210ENST00000571613 LINC00208Q96KT6 92 aa10.85□□□□□ -0.67
RPAIN-210ENST00000571613 TNXBP22105 4242 aa10.82□□□□□ -0.68
RPAIN-210ENST00000571613 C1orf64Q8NEQ6 169 aa10.81□□□□□ -0.68
RPAIN-210ENST00000571613 FP248Q71RG6 208 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-210ENST00000571613 FLG2Q5D862 2391 aaPredicted RBP10.8□□□□□ -0.68
RPAIN-210ENST00000571613 FAT3Q8TDW7 4589 aa10.8□□□□□ -0.68
RPAIN-210ENST00000571613 LRP1Q07954 4544 aaKnown RBP10.78□□□□□ -0.68
RPAIN-210ENST00000571613 MT1HL1P0DM35 61 aa10.78□□□□□ -0.68
RPAIN-210ENST00000571613 ATP5EP56381 51 aaPredicted RBP10.77□□□□□ -0.69
RPAIN-210ENST00000571613 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
RPAIN-210ENST00000571613 FAM236DA0A1B0GTK5 79 aa10.75□□□□□ -0.69
RPAIN-210ENST00000571613 FAM236CP0DP71 79 aa10.75□□□□□ -0.69
RPAIN-210ENST00000571613 LOC101927531A0A1B0GV80 90 aa10.73□□□□□ -0.69
RPAIN-210ENST00000571613 KRTAP13-3Q3SY46 172 aa10.72□□□□□ -0.69
RPAIN-210ENST00000571613 Q5W150 140 aa10.71□□□□□ -0.69
RPAIN-210ENST00000571613 C9orf92A6NGG3 77 aa10.68□□□□□ -0.7
RPAIN-210ENST00000571613 C20orf166-AS1Q96NR2 134 aa10.68□□□□□ -0.7
RPAIN-210ENST00000571613 DMBT1Q9UGM3 2413 aaPredicted RBP10.66□□□□□ -0.7
RPAIN-210ENST00000571613 A8MUU9 505 aa10.66□□□□□ -0.7
RPAIN-210ENST00000571613 KRTAP4-5Q9BYR2 181 aa10.66□□□□□ -0.7
RPAIN-210ENST00000571613 SPANXA2-OT1Q8N9U9 137 aa10.65□□□□□ -0.7
RPAIN-210ENST00000571613 IGLV7-46A0A075B6I9 117 aa10.63□□□□□ -0.71
RPAIN-210ENST00000571613 RPS28P62857 69 aaKnown RBP10.61□□□□□ -0.71
RPAIN-210ENST00000571613 BIRC6Q9NR09 4857 aa10.6□□□□□ -0.71
RPAIN-210ENST00000571613 CYP4F30PQ9H0H9 118 aa10.6□□□□□ -0.71
RPAIN-210ENST00000571613 Q75L30 129 aa10.59□□□□□ -0.71
RPAIN-210ENST00000571613 MYCBP2O75592 4640 aa10.58□□□□□ -0.72
RPAIN-210ENST00000571613 IGKV2-30P06310 120 aa10.58□□□□□ -0.72
RPAIN-210ENST00000571613 SERP1Q9Y6X1 66 aa10.57□□□□□ -0.72
RPAIN-210ENST00000571613 PCOTHQ58A44 107 aa10.56□□□□□ -0.72
RPAIN-210ENST00000571613 PRR4Q16378 134 aa10.51□□□□□ -0.73
RPAIN-210ENST00000571613 J3QL48 77 aa10.5□□□□□ -0.73
RPAIN-210ENST00000571613 C7orf65Q6ZTY9 151 aa10.48□□□□□ -0.73
RPAIN-210ENST00000571613 HERC2O95714 4834 aa10.48□□□□□ -0.73
RPAIN-210ENST00000571613 IGKV2D-30A0A075B6S6 120 aa10.47□□□□□ -0.73
RPAIN-210ENST00000571613 TPRXLQ17RH7 258 aa10.44□□□□□ -0.74
RPAIN-210ENST00000571613 ATP11AUNQ6ZP68 121 aa10.44□□□□□ -0.74
RPAIN-210ENST00000571613 RPL37P61927 97 aaKnown RBP10.44□□□□□ -0.74
RPAIN-210ENST00000571613 XP32Q5T750 250 aa10.43□□□□□ -0.74
RPAIN-210ENST00000571613 HRES1P13985 223 aa10.41□□□□□ -0.74
RPAIN-210ENST00000571613 ABCA13Q86UQ4 5058 aa10.36□□□□□ -0.75
RPAIN-210ENST00000571613 SPINK7P58062 85 aa10.32□□□□□ -0.76
RPAIN-210ENST00000571613 SMIM26A0A096LP01 95 aa10.31□□□□□ -0.76
RPAIN-210ENST00000571613 ACYP2P14621 99 aa10.31□□□□□ -0.76
RPAIN-210ENST00000571613 DMAC1Q96GE9 116 aa10.31□□□□□ -0.76
RPAIN-210ENST00000571613 COA5Q86WW8 74 aa10.27□□□□□ -0.77
RPAIN-210ENST00000571613 A8MUN3 132 aa10.25□□□□□ -0.77
RPAIN-210ENST00000571613 C4orf26Q17RF5 130 aa10.17□□□□□ -0.78
RPAIN-210ENST00000571613 CHKB-CPT1BH3BT56 60 aa10.14□□□□□ -0.79
RPAIN-210ENST00000571613 SEC61BP60468 96 aaKnown RBP10.11□□□□□ -0.79
RPAIN-210ENST00000571613 V9GYY9 64 aa10.11□□□□□ -0.79
RPAIN-210ENST00000571613 COX6B2Q6YFQ2 88 aa10.1□□□□□ -0.79
RPAIN-210ENST00000571613 Q1T7F1 81 aa10.07□□□□□ -0.8
RPAIN-210ENST00000571613 MPLKIPQ8TAP9 179 aa10.04□□□□□ -0.8
RPAIN-210ENST00000571613 KRTAP3-1Q9BYR8 98 aa10□□□□□ -0.81
RPAIN-210ENST00000571613 LRP2P98164 4655 aa10□□□□□ -0.81
RPAIN-210ENST00000571613 LPAP08519 4548 aa9.99□□□□□ -0.81
RPAIN-210ENST00000571613 SPTSSBQ8NFR3 76 aa9.98□□□□□ -0.81
RPAIN-210ENST00000571613 PCLOQ9Y6V0 5065 aa9.97□□□□□ -0.81
RPAIN-210ENST00000571613 RBM12B-AS1Q9P1G2 102 aa9.93□□□□□ -0.82
RPAIN-210ENST00000571613 LINC01558Q9Y6Z2 57 aa9.93□□□□□ -0.82
RPAIN-210ENST00000571613 LCE2DQ5TA82 110 aaPredicted RBP9.9□□□□□ -0.83
RPAIN-210ENST00000571613 H1FX-AS1Q4G0G2 97 aa9.83□□□□□ -0.84
RPAIN-210ENST00000571613 PRR15LQ9BU68 103 aa9.83□□□□□ -0.84
RPAIN-210ENST00000571613 MUC17Q685J3 4493 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms