RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 A0A1W2PNM2 257 aa10.82□□□□□ -0.68
RPA1-202ENST00000570451 A0A1B0GV90 55 aa10.8□□□□□ -0.68
RPA1-202ENST00000570451 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
RPA1-202ENST00000570451 IGKV4-1P06312 121 aa10.75□□□□□ -0.69
RPA1-202ENST00000570451 JMJD7-PLA2G4BH0Y9G9 81 aa10.74□□□□□ -0.69
RPA1-202ENST00000570451 SMCPP49901 116 aaPredicted RBP10.74□□□□□ -0.69
RPA1-202ENST00000570451 LINC00313P59037 77 aa10.74□□□□□ -0.69
RPA1-202ENST00000570451 RBM3P98179 157 aaKnown RBP10.74□□□□□ -0.69
RPA1-202ENST00000570451 TRBV7-4A0A0J9YYF1 115 aa10.73□□□□□ -0.69
RPA1-202ENST00000570451 F8W1H4 67 aa10.71□□□□□ -0.69
RPA1-202ENST00000570451 DSCR8Q96T75 97 aa10.71□□□□□ -0.69
RPA1-202ENST00000570451 DEFB116Q30KQ4 102 aa10.7□□□□□ -0.7
RPA1-202ENST00000570451 CCKP06307 115 aa10.67□□□□□ -0.7
RPA1-202ENST00000570451 C14orf132Q9NPU4 83 aa10.67□□□□□ -0.7
RPA1-202ENST00000570451 FAM236DA0A1B0GTK5 79 aa10.66□□□□□ -0.7
RPA1-202ENST00000570451 KRTAP16-1A8MUX0 517 aa10.66□□□□□ -0.7
RPA1-202ENST00000570451 FAM236CP0DP71 79 aa10.66□□□□□ -0.7
RPA1-202ENST00000570451 IGHV6-1A0A0B4J1U7 121 aa10.65□□□□□ -0.7
RPA1-202ENST00000570451 NOTCH2NLQ7Z3S9 236 aa10.65□□□□□ -0.7
RPA1-202ENST00000570451 LOC110117498A0A087WWA1 95 aa10.64□□□□□ -0.71
RPA1-202ENST00000570451 VPS25Q9BRG1 176 aa10.64□□□□□ -0.71
RPA1-202ENST00000570451 PDE6GP18545 87 aa10.63□□□□□ -0.71
RPA1-202ENST00000570451 LINC00472Q9H8W2 130 aa10.63□□□□□ -0.71
RPA1-202ENST00000570451 Q6ZQT0 140 aa10.61□□□□□ -0.71
RPA1-202ENST00000570451 KRTAP9-8Q9BYQ0 159 aa10.61□□□□□ -0.71
RPA1-202ENST00000570451 ETDBQ3ZM63 59 aa10.6□□□□□ -0.71
RPA1-202ENST00000570451 USH2AO75445 5202 aa10.6□□□□□ -0.71
RPA1-202ENST00000570451 C21orf62-AS1Q17RA5 79 aa10.58□□□□□ -0.72
RPA1-202ENST00000570451 RBM12B-AS1Q9P1G2 102 aa10.57□□□□□ -0.72
RPA1-202ENST00000570451 A0A1B0GVX0 72 aa10.53□□□□□ -0.72
RPA1-202ENST00000570451 HRES1P13985 223 aa10.53□□□□□ -0.72
RPA1-202ENST00000570451 SSPOA2VEC9 5147 aa10.52□□□□□ -0.73
RPA1-202ENST00000570451 C8orf87E5RJ46 101 aa10.51□□□□□ -0.73
RPA1-202ENST00000570451 MPLKIPQ8TAP9 179 aa10.5□□□□□ -0.73
RPA1-202ENST00000570451 A0A1B0GW54 56 aa10.49□□□□□ -0.73
RPA1-202ENST00000570451 MT2AP02795 61 aa10.47□□□□□ -0.73
RPA1-202ENST00000570451 J3KT08 172 aa10.44□□□□□ -0.74
RPA1-202ENST00000570451 ZCCHC13Q8WW36 166 aaKnown RBP10.42□□□□□ -0.74
RPA1-202ENST00000570451 MT1FP04733 61 aa10.39□□□□□ -0.75
RPA1-202ENST00000570451 NDUFB1O75438 58 aa10.38□□□□□ -0.75
RPA1-202ENST00000570451 NREPQ16612 68 aa10.38□□□□□ -0.75
RPA1-202ENST00000570451 KRTAP10-10P60014 251 aa10.37□□□□□ -0.75
RPA1-202ENST00000570451 SPINK7P58062 85 aa10.36□□□□□ -0.75
RPA1-202ENST00000570451 LINC00846Q9NV44 126 aa10.34□□□□□ -0.75
RPA1-202ENST00000570451 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.33□□□□□ -0.76
RPA1-202ENST00000570451 ACYP1P07311 99 aa10.32□□□□□ -0.76
RPA1-202ENST00000570451 Q6ZVQ6 151 aa10.32□□□□□ -0.76
RPA1-202ENST00000570451 UBL5Q9BZL1 73 aa10.32□□□□□ -0.76
RPA1-202ENST00000570451 FCGBPQ9Y6R7 5405 aaPredicted RBP10.32□□□□□ -0.76
RPA1-202ENST00000570451 Q8N9P0 234 aaPredicted RBP10.31□□□□□ -0.76
RPA1-202ENST00000570451 C8orf17Q9NRJ1 99 aa10.31□□□□□ -0.76
RPA1-202ENST00000570451 FAM240AA0A1B0GVK7 77 aa10.3□□□□□ -0.76
RPA1-202ENST00000570451 J3QR89 54 aa10.3□□□□□ -0.76
RPA1-202ENST00000570451 A8MWP4 228 aa10.29□□□□□ -0.76
RPA1-202ENST00000570451 LCE2BO14633 110 aa10.29□□□□□ -0.76
RPA1-202ENST00000570451 KRTAP9-3Q9BYQ3 159 aa10.28□□□□□ -0.76
RPA1-202ENST00000570451 KRTAP9-7A8MTY7 169 aa10.27□□□□□ -0.77
RPA1-202ENST00000570451 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
RPA1-202ENST00000570451 BPY2O14599 106 aa10.25□□□□□ -0.77
RPA1-202ENST00000570451 WFDC13Q8IUB5 93 aa10.25□□□□□ -0.77
RPA1-202ENST00000570451 KRTAP19-1Q8IUB9 90 aa10.22□□□□□ -0.77
RPA1-202ENST00000570451 PRR15Q8IV56 129 aa10.18□□□□□ -0.78
RPA1-202ENST00000570451 K7ERU9 68 aa10.17□□□□□ -0.78
RPA1-202ENST00000570451 K7EQZ3 153 aa10.13□□□□□ -0.79
RPA1-202ENST00000570451 MMP24-AS1A0A0U1RRL7 71 aa10.12□□□□□ -0.79
RPA1-202ENST00000570451 CXCL6P80162 114 aa10.12□□□□□ -0.79
RPA1-202ENST00000570451 TMEM254Q8TBM7 123 aa10.12□□□□□ -0.79
RPA1-202ENST00000570451 MRPL34Q9BQ48 92 aaKnown RBP10.12□□□□□ -0.79
RPA1-202ENST00000570451 ATP5EP2Q5VTU8 51 aa10.11□□□□□ -0.79
RPA1-202ENST00000570451 LINC00643Q86TS7 51 aa10.11□□□□□ -0.79
RPA1-202ENST00000570451 Q8N9L7 120 aa10.11□□□□□ -0.79
RPA1-202ENST00000570451 NDUFS5O43920 106 aa10.1□□□□□ -0.79
RPA1-202ENST00000570451 hDV103S1A0JD37 113 aa10.07□□□□□ -0.8
RPA1-202ENST00000570451 MACF1Q9UPN3 7388 aaKnown RBP10.02□□□□□ -0.81
RPA1-202ENST00000570451 H1FX-AS1Q4G0G2 97 aa10.01□□□□□ -0.81
RPA1-202ENST00000570451 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
RPA1-202ENST00000570451 IGKV2-30P06310 120 aa10□□□□□ -0.81
RPA1-202ENST00000570451 HIST1H4AP62805 103 aaKnown RBP9.99□□□□□ -0.81
RPA1-202ENST00000570451 SYNE2Q8WXH0 6885 aaKnown RBP9.99□□□□□ -0.81
RPA1-202ENST00000570451 HCG22E2RYF7 251 aa9.97□□□□□ -0.81
RPA1-202ENST00000570451 CASC2Q6XLA1 102 aa9.97□□□□□ -0.81
RPA1-202ENST00000570451 KRTAP19-6Q3LI70 58 aa9.95□□□□□ -0.82
RPA1-202ENST00000570451 C7orf65Q6ZTY9 151 aa9.93□□□□□ -0.82
RPA1-202ENST00000570451 Q5W150 140 aa9.92□□□□□ -0.82
RPA1-202ENST00000570451 A0A087WVE0 104 aa9.88□□□□□ -0.83
RPA1-202ENST00000570451 MT-ATP8P03928 68 aa9.88□□□□□ -0.83
RPA1-202ENST00000570451 C4orf26Q17RF5 130 aa9.82□□□□□ -0.84
RPA1-202ENST00000570451 IMUPQ9GZP8 106 aa9.81□□□□□ -0.84
RPA1-202ENST00000570451 TP53AIP1Q9HCN2 124 aa9.74□□□□□ -0.85
RPA1-202ENST00000570451 C5orf47Q569G3 176 aa9.72□□□□□ -0.85
RPA1-202ENST00000570451 SCGB1A1P11684 91 aa9.69□□□□□ -0.86
RPA1-202ENST00000570451 FAM236AA0A1B0GUQ0 79 aa9.68□□□□□ -0.86
RPA1-202ENST00000570451 FAM236BA0A1B0GV22 79 aa9.68□□□□□ -0.86
RPA1-202ENST00000570451 S4R3F8 94 aa9.65□□□□□ -0.86
RPA1-202ENST00000570451 UQCRQO14949 82 aa9.64□□□□□ -0.87
RPA1-202ENST00000570451 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
RPA1-202ENST00000570451 C1orf64Q8NEQ6 169 aa9.61□□□□□ -0.87
RPA1-202ENST00000570451 OCR1Q9BZK8 76 aa9.61□□□□□ -0.87
RPA1-202ENST00000570451 TRAV22A0A0B4J277 110 aa9.59□□□□□ -0.87
RPA1-202ENST00000570451 KRTAP6-3Q3LI67 103 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms