RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 RPL37AP61513 92 aaKnown RBP3.83□□□□□ -1.8
KARS-211ENST00000569298 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
KARS-211ENST00000569298 MRPL34Q9BQ48 92 aaKnown RBP3.83□□□□□ -1.8
KARS-211ENST00000569298 MED13LQ71F56 2210 aa3.83□□□□□ -1.8
KARS-211ENST00000569298 ABCA4P78363 2273 aa3.83□□□□□ -1.8
KARS-211ENST00000569298 NSD1Q96L73 2696 aaPredicted RBP3.83□□□□□ -1.8
KARS-211ENST00000569298 JMJD1CQ15652 2540 aa3.82□□□□□ -1.8
KARS-211ENST00000569298 ABCA2Q9BZC7 2435 aa3.82□□□□□ -1.8
KARS-211ENST00000569298 CAMK2N1Q7Z7J9 78 aa3.82□□□□□ -1.8
KARS-211ENST00000569298 KRTAP13-3Q3SY46 172 aa3.81□□□□□ -1.8
KARS-211ENST00000569298 LELP1Q5T871 98 aa3.81□□□□□ -1.8
KARS-211ENST00000569298 SPINT4Q6UDR6 99 aa3.81□□□□□ -1.8
KARS-211ENST00000569298 C15orf56Q8N910 161 aa3.81□□□□□ -1.8
KARS-211ENST00000569298 TLN2Q9Y4G6 2542 aa3.81□□□□□ -1.8
KARS-211ENST00000569298 MXRA5Q9NR99 2828 aa3.8□□□□□ -1.8
KARS-211ENST00000569298 ATRQ13535 2644 aa3.8□□□□□ -1.8
KARS-211ENST00000569298 STAB1Q9NY15 2570 aa3.8□□□□□ -1.8
KARS-211ENST00000569298 COL6A5A8TX70 2615 aa3.79□□□□□ -1.8
KARS-211ENST00000569298 FBN1P35555 2871 aaKnown RBP3.78□□□□□ -1.8
KARS-211ENST00000569298 PANO1I0J062 215 aa3.78□□□□□ -1.8
KARS-211ENST00000569298 BRD3OSQ6XYD6 125 aa3.78□□□□□ -1.8
KARS-211ENST00000569298 SVEP1Q4LDE5 3571 aa3.77□□□□□ -1.81
KARS-211ENST00000569298 FBN3Q75N90 2809 aa3.77□□□□□ -1.81
KARS-211ENST00000569298 A0A1B0GVX0 72 aa3.77□□□□□ -1.81
KARS-211ENST00000569298 GIG44P09565 113 aaPredicted RBP3.77□□□□□ -1.81
KARS-211ENST00000569298 Q96NJ1 140 aa3.77□□□□□ -1.81
KARS-211ENST00000569298 NBEAL1Q6ZS30 2694 aa3.76□□□□□ -1.81
KARS-211ENST00000569298 KRTAP21-3Q3LHN1 58 aa3.76□□□□□ -1.81
KARS-211ENST00000569298 LCE1AQ5T7P2 110 aa3.76□□□□□ -1.81
KARS-211ENST00000569298 C4orf3Q8WVX3 66 aa3.76□□□□□ -1.81
KARS-211ENST00000569298 ROS1P08922 2347 aa3.76□□□□□ -1.81
KARS-211ENST00000569298 CSPG4Q6UVK1 2322 aa3.76□□□□□ -1.81
KARS-211ENST00000569298 HIVEP2P31629 2446 aa3.75□□□□□ -1.81
KARS-211ENST00000569298 ANK3Q12955 4377 aaKnown RBP3.75□□□□□ -1.81
KARS-211ENST00000569298 ANK2Q01484 3957 aa3.74□□□□□ -1.81
KARS-211ENST00000569298 LY6EQ16553 131 aa3.74□□□□□ -1.81
KARS-211ENST00000569298 WNK1Q9H4A3 2382 aa3.74□□□□□ -1.81
KARS-211ENST00000569298 SONP18583 2426 aaKnown RBP3.73□□□□□ -1.81
KARS-211ENST00000569298 FN1P02751 2386 aaKnown RBP3.73□□□□□ -1.81
KARS-211ENST00000569298 COX6B2Q6YFQ2 88 aa3.73□□□□□ -1.81
KARS-211ENST00000569298 CIRBP-AS1Q8TBR5 109 aa3.73□□□□□ -1.81
KARS-211ENST00000569298 SMR3AQ99954 134 aa3.73□□□□□ -1.81
KARS-211ENST00000569298 CUBNO60494 3623 aa3.73□□□□□ -1.81
KARS-211ENST00000569298 NBDYA0A0U1RRE5 68 aa3.72□□□□□ -1.81
KARS-211ENST00000569298 A0A1W2PPR1 153 aa3.72□□□□□ -1.81
KARS-211ENST00000569298 SSBP3-AS1Q7Z2R9 100 aa3.72□□□□□ -1.81
KARS-211ENST00000569298 H0YAA0 97 aa3.71□□□□□ -1.82
KARS-211ENST00000569298 Q6ZSA8 131 aa3.7□□□□□ -1.82
KARS-211ENST00000569298 A0A0G2JQZ4 141 aa3.69□□□□□ -1.82
KARS-211ENST00000569298 PSORS1C2Q9UIG4 136 aa3.69□□□□□ -1.82
KARS-211ENST00000569298 A0A1B0GU33 70 aa3.68□□□□□ -1.82
KARS-211ENST00000569298 H3BNG1 76 aa3.68□□□□□ -1.82
KARS-211ENST00000569298 DEFB130BP0DP73 79 aa3.68□□□□□ -1.82
KARS-211ENST00000569298 DEFB130AP0DP74 79 aa3.68□□□□□ -1.82
KARS-211ENST00000569298 DEFB136Q30KP8 78 aa3.68□□□□□ -1.82
KARS-211ENST00000569298 IGKV2D-30A0A075B6S6 120 aa3.67□□□□□ -1.82
KARS-211ENST00000569298 A0A1W2PNN7 141 aa3.67□□□□□ -1.82
KARS-211ENST00000569298 TENM1Q9UKZ4 2725 aa3.67□□□□□ -1.82
KARS-211ENST00000569298 MAPK1IP1LQ8NDC0 245 aa3.66□□□□□ -1.82
KARS-211ENST00000569298 PKD1L1Q8TDX9 2849 aa3.66□□□□□ -1.82
KARS-211ENST00000569298 C10orf99Q6UWK7 81 aa3.65□□□□□ -1.83
KARS-211ENST00000569298 KRTAP1-5Q9BYS1 174 aa3.65□□□□□ -1.83
KARS-211ENST00000569298 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.65□□□□□ -1.833e-17■■■□□ 19
KARS-211ENST00000569298 MEGF8Q7Z7M0 2845 aa3.64□□□□□ -1.83
KARS-211ENST00000569298 H1FX-AS1Q4G0G2 97 aa3.64□□□□□ -1.83
KARS-211ENST00000569298 ALMS1Q8TCU4 4167 aa3.63□□□□□ -1.83
KARS-211ENST00000569298 TPRXLQ17RH7 258 aa3.62□□□□□ -1.83
KARS-211ENST00000569298 KRTAP24-1Q3LI83 254 aa3.62□□□□□ -1.83
KARS-211ENST00000569298 KRTAP7-1Q8IUC3 87 aa3.62□□□□□ -1.83
KARS-211ENST00000569298 MGAM2Q2M2H8 2515 aa3.62□□□□□ -1.83
KARS-211ENST00000569298 A0A096LPF7 62 aa3.61□□□□□ -1.83
KARS-211ENST00000569298 CRIPTQ9P021 101 aa3.61□□□□□ -1.83
KARS-211ENST00000569298 TRRAPQ9Y4A5 3859 aa3.61□□□□□ -1.83
KARS-211ENST00000569298 LINC01556Q5JQF7 62 aa3.6□□□□□ -1.83
KARS-211ENST00000569298 K7EIL1 84 aa3.59□□□□□ -1.83
KARS-211ENST00000569298 TGP01266 2768 aa3.58□□□□□ -1.84
KARS-211ENST00000569298 VWFP04275 2813 aa3.58□□□□□ -1.84
KARS-211ENST00000569298 SPART-AS1P0CW21 52 aa3.57□□□□□ -1.84
KARS-211ENST00000569298 RPL37P61927 97 aaKnown RBP3.57□□□□□ -1.84
KARS-211ENST00000569298 CMYA5Q8N3K9 4069 aa3.55□□□□□ -1.84
KARS-211ENST00000569298 NOTCH1P46531 2555 aa3.55□□□□□ -1.84
KARS-211ENST00000569298 PRLHP81277 87 aa3.54□□□□□ -1.84
KARS-211ENST00000569298 KRTAP13-1Q8IUC0 172 aa3.52□□□□□ -1.85
KARS-211ENST00000569298 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
KARS-211ENST00000569298 PRKDCP78527 4128 aaKnown RBP3.52□□□□□ -1.85
KARS-211ENST00000569298 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
KARS-211ENST00000569298 KRTAP2-2Q9BYT5 123 aa3.49□□□□□ -1.85
KARS-211ENST00000569298 C14orf177Q52M58 125 aa3.46□□□□□ -1.86
KARS-211ENST00000569298 NBEAL2Q6ZNJ1 2754 aa3.46□□□□□ -1.86
KARS-211ENST00000569298 TYMSOSQ8TAI1 123 aa3.45□□□□□ -1.86
KARS-211ENST00000569298 TENM3Q9P273 2699 aa3.43□□□□□ -1.86
KARS-211ENST00000569298 DNAH3Q8TD57 4116 aa3.43□□□□□ -1.86
KARS-211ENST00000569298 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
KARS-211ENST00000569298 NOTCH3Q9UM47 2321 aa3.42□□□□□ -1.86
KARS-211ENST00000569298 COL7A1Q02388 2944 aa3.42□□□□□ -1.86
KARS-211ENST00000569298 SPINK1P00995 79 aa3.42□□□□□ -1.86
KARS-211ENST00000569298 A0A096LNI7 61 aa3.41□□□□□ -1.86
KARS-211ENST00000569298 HTN3P15516 51 aa3.4□□□□□ -1.87
KARS-211ENST00000569298 KRTAP10-6P60371 365 aaPredicted RBP3.4□□□□□ -1.87
KARS-211ENST00000569298 INE1O15225 51 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms