RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 KMT2CQ8NEZ4 4911 aaKnown RBP9.17□□□□□ -0.94
SNX20-204ENST00000568993 A8MWP4 228 aa9.16□□□□□ -0.94
SNX20-204ENST00000568993 KRTAP1-4P0C5Y4 121 aa9.15□□□□□ -0.94
SNX20-204ENST00000568993 PRR26Q8N8Z3 221 aa9.15□□□□□ -0.94
SNX20-204ENST00000568993 OCR1Q9BZK8 76 aa9.15□□□□□ -0.94
SNX20-204ENST00000568993 A0A087X002 238 aa9.14□□□□□ -0.95
SNX20-204ENST00000568993 HCG22E2RYF7 251 aa9.14□□□□□ -0.95
SNX20-204ENST00000568993 KRTAP13-2Q52LG2 175 aa9.14□□□□□ -0.95
SNX20-204ENST00000568993 SPINK6Q6UWN8 80 aa9.1□□□□□ -0.95
SNX20-204ENST00000568993 KRTAP29-1A8MX34 341 aaPredicted RBP9.09□□□□□ -0.95
SNX20-204ENST00000568993 APOBP04114 4563 aaKnown RBP9.09□□□□□ -0.95
SNX20-204ENST00000568993 NDUFB1O75438 58 aa9.09□□□□□ -0.95
SNX20-204ENST00000568993 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
SNX20-204ENST00000568993 hDV103S1A0JD37 113 aa9.07□□□□□ -0.96
SNX20-204ENST00000568993 TMEM254Q8TBM7 123 aa9.06□□□□□ -0.96
SNX20-204ENST00000568993 SMR3BP02814 79 aaPredicted RBP9.05□□□□□ -0.96
SNX20-204ENST00000568993 PLA2G1BP04054 148 aaKnown RBP9.05□□□□□ -0.96
SNX20-204ENST00000568993 KRTAP10-4P60372 401 aaPredicted RBP9.04□□□□□ -0.96
SNX20-204ENST00000568993 CASC2Q6XLA1 102 aa9.04□□□□□ -0.96
SNX20-204ENST00000568993 WFDC13Q8IUB5 93 aa9.04□□□□□ -0.96
SNX20-204ENST00000568993 TRAV22A0A0B4J277 110 aa9.03□□□□□ -0.96
SNX20-204ENST00000568993 MMP24-AS1A0A0U1RRL7 71 aa9.03□□□□□ -0.96
SNX20-204ENST00000568993 LCA10Q71F78 164 aa9.03□□□□□ -0.96
SNX20-204ENST00000568993 A0A1B0GVX0 72 aa9.02□□□□□ -0.97
SNX20-204ENST00000568993 A6NN06 94 aa9.02□□□□□ -0.97
SNX20-204ENST00000568993 PSPHP1O15172 72 aa9.02□□□□□ -0.97
SNX20-204ENST00000568993 A8MUN3 132 aa9□□□□□ -0.97
SNX20-204ENST00000568993 CDK2AP2O75956 126 aa9□□□□□ -0.97
SNX20-204ENST00000568993 ATP11AUNQ6ZP68 121 aa9□□□□□ -0.97
SNX20-204ENST00000568993 C7orf65Q6ZTY9 151 aa8.99□□□□□ -0.97
SNX20-204ENST00000568993 A8MU10 97 aa8.98□□□□□ -0.97
SNX20-204ENST00000568993 C8orf17Q9NRJ1 99 aa8.98□□□□□ -0.97
SNX20-204ENST00000568993 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
SNX20-204ENST00000568993 FAT1Q14517 4588 aa8.97□□□□□ -0.97
SNX20-204ENST00000568993 IGHV6-1A0A0B4J1U7 121 aa8.96□□□□□ -0.98
SNX20-204ENST00000568993 LIMD2Q9BT23 127 aa8.95□□□□□ -0.98
SNX20-204ENST00000568993 RYR3Q15413 4870 aa8.94□□□□□ -0.98
SNX20-204ENST00000568993 SPINK1P00995 79 aa8.93□□□□□ -0.98
SNX20-204ENST00000568993 Q5VV11 94 aa8.93□□□□□ -0.98
SNX20-204ENST00000568993 C1orf64Q8NEQ6 169 aa8.92□□□□□ -0.98
SNX20-204ENST00000568993 RPS29P62273 56 aaKnown RBP8.9□□□□□ -0.98
SNX20-204ENST00000568993 NOTCH2NLQ7Z3S9 236 aa8.9□□□□□ -0.98
SNX20-204ENST00000568993 ZCCHC13Q8WW36 166 aaKnown RBP8.9□□□□□ -0.98
SNX20-204ENST00000568993 SPAG11AQ6PDA7 123 aa8.89□□□□□ -0.99
SNX20-204ENST00000568993 MRPL34Q9BQ48 92 aaKnown RBP8.88□□□□□ -0.99
SNX20-204ENST00000568993 TP53AIP1Q9HCN2 124 aa8.88□□□□□ -0.99
SNX20-204ENST00000568993 LINC00304Q8N9R0 145 aa8.88□□□□□ -0.99
SNX20-204ENST00000568993 SPTSSBQ8NFR3 76 aa8.88□□□□□ -0.99
SNX20-204ENST00000568993 PKHD1L1Q86WI1 4243 aa8.87□□□□□ -0.99
SNX20-204ENST00000568993 MP68P56378 58 aa8.87□□□□□ -0.99
SNX20-204ENST00000568993 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
SNX20-204ENST00000568993 H3BPC8 53 aa8.85□□□□□ -0.99
SNX20-204ENST00000568993 H0Y9P7 68 aa8.83□□□□□ -1
SNX20-204ENST00000568993 CHKB-CPT1BH3BT56 60 aa8.83□□□□□ -1
SNX20-204ENST00000568993 CYP4F30PQ9H0H9 118 aa8.82□□□□□ -1
SNX20-204ENST00000568993 HSPG2P98160 4391 aa8.81□□□□□ -1
SNX20-204ENST00000568993 LINC00313P59037 77 aa8.81□□□□□ -1
SNX20-204ENST00000568993 LINC00208Q96KT6 92 aa8.8□□□□□ -1
SNX20-204ENST00000568993 RYR1P21817 5038 aa8.78□□□□□ -1
SNX20-204ENST00000568993 LINC01554Q52M75 96 aa8.78□□□□□ -1
SNX20-204ENST00000568993 Q5VSD8 79 aa8.78□□□□□ -1
SNX20-204ENST00000568993 Q75L30 129 aa8.75□□□□□ -1.01
SNX20-204ENST00000568993 Q8N9P0 234 aaPredicted RBP8.75□□□□□ -1.01
SNX20-204ENST00000568993 CDC42SE1Q9NRR8 79 aa8.75□□□□□ -1.01
SNX20-204ENST00000568993 KRTAP16-1A8MUX0 517 aa8.74□□□□□ -1.01
SNX20-204ENST00000568993 KRTAP13-3Q3SY46 172 aa8.71□□□□□ -1.02
SNX20-204ENST00000568993 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
SNX20-204ENST00000568993 Q5W150 140 aa8.68□□□□□ -1.02
SNX20-204ENST00000568993 PRR15LQ9BU68 103 aa8.68□□□□□ -1.02
SNX20-204ENST00000568993 KRTAP17-1Q9BYP8 105 aa8.68□□□□□ -1.02
SNX20-204ENST00000568993 A6NED7 52 aa8.68□□□□□ -1.02
SNX20-204ENST00000568993 LOC101927531A0A1B0GV80 90 aa8.67□□□□□ -1.02
SNX20-204ENST00000568993 SPANXA2-OT1Q8N9U9 137 aa8.66□□□□□ -1.02
SNX20-204ENST00000568993 KIAA1109Q2LD37 5005 aa8.65□□□□□ -1.03
SNX20-204ENST00000568993 TNXBP22105 4242 aa8.65□□□□□ -1.03
SNX20-204ENST00000568993 Q8N1X5 172 aa8.64□□□□□ -1.03
SNX20-204ENST00000568993 FLG2Q5D862 2391 aaPredicted RBP8.64□□□□□ -1.03
SNX20-204ENST00000568993 LRP1Q07954 4544 aaKnown RBP8.62□□□□□ -1.03
SNX20-204ENST00000568993 EPPK1P58107 5090 aaKnown RBP8.61□□□□□ -1.03
SNX20-204ENST00000568993 FAT3Q8TDW7 4589 aa8.59□□□□□ -1.03
SNX20-204ENST00000568993 IGLV7-46A0A075B6I9 117 aa8.58□□□□□ -1.04
SNX20-204ENST00000568993 PRAC1Q96KF2 57 aa8.58□□□□□ -1.04
SNX20-204ENST00000568993 PCOTHQ58A44 107 aa8.56□□□□□ -1.04
SNX20-204ENST00000568993 PRR4Q16378 134 aa8.55□□□□□ -1.04
SNX20-204ENST00000568993 RETNLBQ9BQ08 111 aa8.54□□□□□ -1.04
SNX20-204ENST00000568993 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
SNX20-204ENST00000568993 C20orf166-AS1Q96NR2 134 aa8.52□□□□□ -1.05
SNX20-204ENST00000568993 A8MUU9 505 aa8.51□□□□□ -1.05
SNX20-204ENST00000568993 MT1HL1P0DM35 61 aa8.51□□□□□ -1.05
SNX20-204ENST00000568993 C9orf92A6NGG3 77 aa8.49□□□□□ -1.05
SNX20-204ENST00000568993 DMBT1Q9UGM3 2413 aaPredicted RBP8.47□□□□□ -1.05
SNX20-204ENST00000568993 A0A0A0MQY5 61 aa8.47□□□□□ -1.05
SNX20-204ENST00000568993 ADM2Q7Z4H4 148 aa8.44□□□□□ -1.06
SNX20-204ENST00000568993 MYCBP2O75592 4640 aa8.44□□□□□ -1.06
SNX20-204ENST00000568993 HRES1P13985 223 aa8.43□□□□□ -1.06
SNX20-204ENST00000568993 LINC01558Q9Y6Z2 57 aa8.42□□□□□ -1.06
SNX20-204ENST00000568993 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
SNX20-204ENST00000568993 COA5Q86WW8 74 aa8.38□□□□□ -1.07
SNX20-204ENST00000568993 SPINK7P58062 85 aa8.37□□□□□ -1.07
SNX20-204ENST00000568993 KRTAP4-5Q9BYR2 181 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms