RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	KRTAP19-2	Q3LHN2	52 aa		5.41	□□□□□ -1.54
UBR1-207	ENST00000568782	NAA38	Q9BRA0	125 aa	Known RBP	5.41	□□□□□ -1.54
UBR1-207	ENST00000568782		A0A1B0GVX0	72 aa		5.38	□□□□□ -1.55
UBR1-207	ENST00000568782		Q6ZQT0	140 aa		5.38	□□□□□ -1.55
UBR1-207	ENST00000568782	LOC110117498	A0A087WWA1	95 aa		5.36	□□□□□ -1.55
UBR1-207	ENST00000568782	FAM236D	A0A1B0GTK5	79 aa		5.36	□□□□□ -1.55
UBR1-207	ENST00000568782	FAM236C	P0DP71	79 aa		5.36	□□□□□ -1.55
UBR1-207	ENST00000568782	RBM12B-AS1	Q9P1G2	102 aa		5.36	□□□□□ -1.55
UBR1-207	ENST00000568782	C14orf132	Q9NPU4	83 aa		5.35	□□□□□ -1.55
UBR1-207	ENST00000568782	KRTAP16-1	A8MUX0	517 aa		5.34	□□□□□ -1.55
UBR1-207	ENST00000568782	NREP	Q16612	68 aa		5.34	□□□□□ -1.55
UBR1-207	ENST00000568782	NOTCH2NL	Q7Z3S9	236 aa		5.34	□□□□□ -1.55
UBR1-207	ENST00000568782	C9orf118	A6NHY6	69 aa		5.33	□□□□□ -1.56
UBR1-207	ENST00000568782	KRTAP10-6	P60371	365 aa	Predicted RBP	5.33	□□□□□ -1.56
UBR1-207	ENST00000568782	MTURN	Q8N3F0	131 aa		5.33	□□□□□ -1.56
UBR1-207	ENST00000568782		A8MWP4	228 aa		5.32	□□□□□ -1.56
UBR1-207	ENST00000568782	KRTAP9-6	A0A140TA67	174 aa		5.31	□□□□□ -1.56
UBR1-207	ENST00000568782		H3BT86	120 aa		5.31	□□□□□ -1.56
UBR1-207	ENST00000568782	LOR	P23490	312 aa	Predicted RBP	5.3	□□□□□ -1.56
UBR1-207	ENST00000568782	LOC105371267	A0A1B0GV96	52 aa		5.29	□□□□□ -1.56
UBR1-207	ENST00000568782		A0A1W2PPM0	123 aa		5.29	□□□□□ -1.56
UBR1-207	ENST00000568782	ZCCHC13	Q8WW36	166 aa	Known RBP	5.28	□□□□□ -1.56
UBR1-207	ENST00000568782	C8orf17	Q9NRJ1	99 aa		5.28	□□□□□ -1.56
UBR1-207	ENST00000568782	TAX1BP3	O14907	124 aa		5.27	□□□□□ -1.57
UBR1-207	ENST00000568782		Q6ZVQ6	151 aa		5.26	□□□□□ -1.57
UBR1-207	ENST00000568782	IGKV3D-7	A0A0C4DH55	119 aa		5.25	□□□□□ -1.57
UBR1-207	ENST00000568782	PRR15	Q8IV56	129 aa		5.25	□□□□□ -1.57
UBR1-207	ENST00000568782		Q8N9P0	234 aa	Predicted RBP	5.25	□□□□□ -1.57
UBR1-207	ENST00000568782	SPCS1	Q9Y6A9	102 aa		5.25	□□□□□ -1.57
UBR1-207	ENST00000568782	BPY2	O14599	106 aa		5.24	□□□□□ -1.57
UBR1-207	ENST00000568782	NDUFS5	O43920	106 aa		5.23	□□□□□ -1.57
UBR1-207	ENST00000568782	SPINK7	P58062	85 aa		5.23	□□□□□ -1.57
UBR1-207	ENST00000568782	HRES1	P13985	223 aa		5.22	□□□□□ -1.57
UBR1-207	ENST00000568782	COL5A1-AS1	Q5SY13	56 aa		5.22	□□□□□ -1.57
UBR1-207	ENST00000568782	TMEM254	Q8TBM7	123 aa		5.22	□□□□□ -1.57
UBR1-207	ENST00000568782	MRPL34	Q9BQ48	92 aa	Known RBP	5.22	□□□□□ -1.57
UBR1-207	ENST00000568782	CRCT1	Q9UGL9	99 aa		5.22	□□□□□ -1.57
UBR1-207	ENST00000568782	hDV103S1	A0JD37	113 aa		5.21	□□□□□ -1.58
UBR1-207	ENST00000568782	FLG	P20930	4061 aa	Predicted RBP	5.19	□□□□□ -1.58
UBR1-207	ENST00000568782		K7EQZ3	153 aa		5.19	□□□□□ -1.58
UBR1-207	ENST00000568782	MPLKIP	Q8TAP9	179 aa		5.19	□□□□□ -1.58
UBR1-207	ENST00000568782	MMP24-AS1	A0A0U1RRL7	71 aa		5.17	□□□□□ -1.58
UBR1-207	ENST00000568782	UBL5	Q9BZL1	73 aa		5.17	□□□□□ -1.58
UBR1-207	ENST00000568782	GTF2H5	Q6ZYL4	71 aa		5.16	□□□□□ -1.58
UBR1-207	ENST00000568782	WFDC13	Q8IUB5	93 aa		5.16	□□□□□ -1.58
UBR1-207	ENST00000568782	KRTAP3-3	Q9BYR6	98 aa		5.15	□□□□□ -1.59
UBR1-207	ENST00000568782	KRTAP3-2	Q9BYR7	98 aa		5.15	□□□□□ -1.59
UBR1-207	ENST00000568782	CASC2	Q6XLA1	102 aa		5.14	□□□□□ -1.59
UBR1-207	ENST00000568782		K7EP34	96 aa		5.13	□□□□□ -1.59
UBR1-207	ENST00000568782	IGKV2D-30	A0A075B6S6	120 aa		5.11	□□□□□ -1.59
UBR1-207	ENST00000568782	IGKV2-30	P06310	120 aa		5.11	□□□□□ -1.59
UBR1-207	ENST00000568782	SMCP	P49901	116 aa	Predicted RBP	5.11	□□□□□ -1.59
UBR1-207	ENST00000568782	KRTAP9-8	Q9BYQ0	159 aa		5.11	□□□□□ -1.59
UBR1-207	ENST00000568782	LOC100996750	A0A140TA64	210 aa		5.1	□□□□□ -1.59
UBR1-207	ENST00000568782	HCG22	E2RYF7	251 aa		5.1	□□□□□ -1.59
UBR1-207	ENST00000568782	C7orf65	Q6ZTY9	151 aa		5.1	□□□□□ -1.59
UBR1-207	ENST00000568782	KRTAP4-6	Q9BYQ5	205 aa		5.1	□□□□□ -1.59
UBR1-207	ENST00000568782	PCP4L1	A6NKN8	68 aa		5.09	□□□□□ -1.59
UBR1-207	ENST00000568782		F8W1H4	67 aa		5.09	□□□□□ -1.59
UBR1-207	ENST00000568782	KRTAP10-10	P60014	251 aa		5.09	□□□□□ -1.59
UBR1-207	ENST00000568782	CXCL6	P80162	114 aa		5.09	□□□□□ -1.59
UBR1-207	ENST00000568782		Q8N9L7	120 aa		5.09	□□□□□ -1.59
UBR1-207	ENST00000568782	FSIP2	Q5CZC0	6907 aa		5.09	□□□□□ -1.6
UBR1-207	ENST00000568782	LINC00846	Q9NV44	126 aa		5.08	□□□□□ -1.6
UBR1-207	ENST00000568782	PRO0461	Q9UI25	63 aa		5.07	□□□□□ -1.6
UBR1-207	ENST00000568782	H1FX-AS1	Q4G0G2	97 aa		5.06	□□□□□ -1.6
UBR1-207	ENST00000568782	MT2A	P02795	61 aa		5.05	□□□□□ -1.6
UBR1-207	ENST00000568782	ETDB	Q3ZM63	59 aa		5.03	□□□□□ -1.6
UBR1-207	ENST00000568782		Q5W150	140 aa		5.03	□□□□□ -1.6
UBR1-207	ENST00000568782	TP53AIP1	Q9HCN2	124 aa		5.03	□□□□□ -1.6
UBR1-207	ENST00000568782	MT1F	P04733	61 aa		5	□□□□□ -1.61
UBR1-207	ENST00000568782	ACYP1	P07311	99 aa		4.98	□□□□□ -1.61
UBR1-207	ENST00000568782	C4orf26	Q17RF5	130 aa		4.98	□□□□□ -1.61
UBR1-207	ENST00000568782	KRTAP9-3	Q9BYQ3	159 aa		4.95	□□□□□ -1.62
UBR1-207	ENST00000568782	ATP5EP2	Q5VTU8	51 aa		4.92	□□□□□ -1.62
UBR1-207	ENST00000568782	C1orf64	Q8NEQ6	169 aa		4.92	□□□□□ -1.62
UBR1-207	ENST00000568782	LCE2B	O14633	110 aa		4.91	□□□□□ -1.62
UBR1-207	ENST00000568782	HIST1H4A	P62805	103 aa	Known RBP	4.91	□□□□□ -1.62
UBR1-207	ENST00000568782		S4R3F8	94 aa		4.91	□□□□□ -1.62
UBR1-207	ENST00000568782	FAM240A	A0A1B0GVK7	77 aa		4.9	□□□□□ -1.63
UBR1-207	ENST00000568782	TRAV22	A0A0B4J277	110 aa		4.89	□□□□□ -1.63
UBR1-207	ENST00000568782	FAM236A	A0A1B0GUQ0	79 aa		4.89	□□□□□ -1.63
UBR1-207	ENST00000568782	FAM236B	A0A1B0GV22	79 aa		4.89	□□□□□ -1.63
UBR1-207	ENST00000568782	C5orf47	Q569G3	176 aa		4.89	□□□□□ -1.63
UBR1-207	ENST00000568782	CSAG1	Q6PB30	78 aa		4.89	□□□□□ -1.63
UBR1-207	ENST00000568782	LOC101927531	A0A1B0GV80	90 aa		4.87	□□□□□ -1.63
UBR1-207	ENST00000568782	ATOX1	O00244	68 aa		4.85	□□□□□ -1.63
UBR1-207	ENST00000568782	UQCRQ	O14949	82 aa		4.85	□□□□□ -1.63
UBR1-207	ENST00000568782	KRTAP19-1	Q8IUB9	90 aa		4.85	□□□□□ -1.63
UBR1-207	ENST00000568782	CYP4F30P	Q9H0H9	118 aa		4.85	□□□□□ -1.63
UBR1-207	ENST00000568782	LINC00643	Q86TS7	51 aa		4.83	□□□□□ -1.64
UBR1-207	ENST00000568782	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.82	□□□□□ -1.64
UBR1-207	ENST00000568782	LCA10	Q71F78	164 aa		4.82	□□□□□ -1.64
UBR1-207	ENST00000568782	USH2A	O75445	5202 aa		4.82	□□□□□ -1.64
UBR1-207	ENST00000568782		H0Y9P7	68 aa		4.81	□□□□□ -1.64
UBR1-207	ENST00000568782		J3QR89	54 aa		4.81	□□□□□ -1.64
UBR1-207	ENST00000568782	KRTAP3-1	Q9BYR8	98 aa		4.81	□□□□□ -1.64
UBR1-207	ENST00000568782	KRTAP9-7	A8MTY7	169 aa		4.78	□□□□□ -1.64
UBR1-207	ENST00000568782	MP68	P56378	58 aa		4.78	□□□□□ -1.64
UBR1-207	ENST00000568782	KRTAP19-6	Q3LI70	58 aa		4.78	□□□□□ -1.64

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