RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 PKD1P98161 4303 aa5.73□□□□□ -1.49
TCF4-240ENST00000568673 FAM229BQ4G0N7 80 aa5.73□□□□□ -1.49
TCF4-240ENST00000568673 PRR26Q8N8Z3 221 aa5.73□□□□□ -1.49
TCF4-240ENST00000568673 CYP4F30PQ9H0H9 118 aa5.72□□□□□ -1.49
TCF4-240ENST00000568673 FAT2Q9NYQ8 4349 aa5.72□□□□□ -1.49
TCF4-240ENST00000568673 A0A1B0GVX0 72 aa5.72□□□□□ -1.49
TCF4-240ENST00000568673 C8orf17Q9NRJ1 99 aa5.72□□□□□ -1.49
TCF4-240ENST00000568673 LRP1BQ9NZR2 4599 aa5.72□□□□□ -1.49
TCF4-240ENST00000568673 HYDINQ4G0P3 5121 aa5.71□□□□□ -1.5
TCF4-240ENST00000568673 C1orf64Q8NEQ6 169 aa5.71□□□□□ -1.5
TCF4-240ENST00000568673 CDK2AP2O75956 126 aa5.71□□□□□ -1.5
TCF4-240ENST00000568673 TP53AIP1Q9HCN2 124 aa5.71□□□□□ -1.5
TCF4-240ENST00000568673 IGHV6-1A0A0B4J1U7 121 aa5.7□□□□□ -1.5
TCF4-240ENST00000568673 CD164Q04900 197 aa5.69□□□□□ -1.5
TCF4-240ENST00000568673 Q6ZSA8 131 aa5.69□□□□□ -1.5
TCF4-240ENST00000568673 SSBP3-AS1Q7Z2R9 100 aa5.69□□□□□ -1.5
TCF4-240ENST00000568673 SPANXA2-OT1Q8N9U9 137 aa5.69□□□□□ -1.5
TCF4-240ENST00000568673 PRR4Q16378 134 aa5.68□□□□□ -1.5
TCF4-240ENST00000568673 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
TCF4-240ENST00000568673 KRTAP10-1P60331 282 aa5.66□□□□□ -1.5
TCF4-240ENST00000568673 MPLKIPQ8TAP9 179 aa5.66□□□□□ -1.5
TCF4-240ENST00000568673 MRPL34Q9BQ48 92 aaKnown RBP5.66□□□□□ -1.5
TCF4-240ENST00000568673 A0A087X002 238 aa5.65□□□□□ -1.5
TCF4-240ENST00000568673 KRTAP21-3Q3LHN1 58 aa5.65□□□□□ -1.5
TCF4-240ENST00000568673 NOTCH2NLQ7Z3S9 236 aa5.65□□□□□ -1.5
TCF4-240ENST00000568673 NDUFS5O43920 106 aa5.65□□□□□ -1.51
TCF4-240ENST00000568673 SPINK6Q6UWN8 80 aa5.64□□□□□ -1.51
TCF4-240ENST00000568673 VPS13BQ7Z7G8 4022 aa5.63□□□□□ -1.51
TCF4-240ENST00000568673 Q1T7F1 81 aa5.62□□□□□ -1.51
TCF4-240ENST00000568673 IGLV7-46A0A075B6I9 117 aa5.61□□□□□ -1.51
TCF4-240ENST00000568673 KRTAP13-2Q52LG2 175 aa5.61□□□□□ -1.51
TCF4-240ENST00000568673 Q75L30 129 aa5.6□□□□□ -1.51
TCF4-240ENST00000568673 SACSQ9NZJ4 4579 aa5.6□□□□□ -1.51
TCF4-240ENST00000568673 C8orf87E5RJ46 101 aa5.59□□□□□ -1.51
TCF4-240ENST00000568673 PCOTHQ58A44 107 aa5.59□□□□□ -1.51
TCF4-240ENST00000568673 KRTAP1-4P0C5Y4 121 aa5.58□□□□□ -1.52
TCF4-240ENST00000568673 PKHD1P08F94 4074 aa5.56□□□□□ -1.52
TCF4-240ENST00000568673 C1orf195Q5TG92 126 aa5.56□□□□□ -1.52
TCF4-240ENST00000568673 LINC00313P59037 77 aa5.56□□□□□ -1.52
TCF4-240ENST00000568673 Q5W150 140 aa5.56□□□□□ -1.52
TCF4-240ENST00000568673 PRO0628Q9UI54 55 aa5.56□□□□□ -1.52
TCF4-240ENST00000568673 LOC101927531A0A1B0GV80 90 aa5.55□□□□□ -1.52
TCF4-240ENST00000568673 KRTAP13-3Q3SY46 172 aa5.55□□□□□ -1.52
TCF4-240ENST00000568673 COA5Q86WW8 74 aa5.53□□□□□ -1.52
TCF4-240ENST00000568673 Q8N9P0 234 aaPredicted RBP5.53□□□□□ -1.52
TCF4-240ENST00000568673 LIMD2Q9BT23 127 aa5.53□□□□□ -1.52
TCF4-240ENST00000568673 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
TCF4-240ENST00000568673 PSPHP1O15172 72 aa5.51□□□□□ -1.53
TCF4-240ENST00000568673 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
TCF4-240ENST00000568673 TYMSOSQ8TAI1 123 aa5.5□□□□□ -1.53
TCF4-240ENST00000568673 SPINK1P00995 79 aa5.49□□□□□ -1.53
TCF4-240ENST00000568673 A8MUN3 132 aa5.48□□□□□ -1.53
TCF4-240ENST00000568673 KRTAP16-1A8MUX0 517 aa5.48□□□□□ -1.53
TCF4-240ENST00000568673 HRES1P13985 223 aa5.47□□□□□ -1.53
TCF4-240ENST00000568673 Q5VV11 94 aa5.45□□□□□ -1.54
TCF4-240ENST00000568673 FAT1Q14517 4588 aa5.45□□□□□ -1.54
TCF4-240ENST00000568673 APOBP04114 4563 aaKnown RBP5.44□□□□□ -1.54
TCF4-240ENST00000568673 IGKV2-30P06310 120 aa5.43□□□□□ -1.54
TCF4-240ENST00000568673 RETNLBQ9BQ08 111 aa5.43□□□□□ -1.54
TCF4-240ENST00000568673 A0A1B0GVY2 172 aa5.43□□□□□ -1.54
TCF4-240ENST00000568673 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
TCF4-240ENST00000568673 PRR15LQ9BU68 103 aa5.43□□□□□ -1.54
TCF4-240ENST00000568673 SMR3BP02814 79 aaPredicted RBP5.42□□□□□ -1.54
TCF4-240ENST00000568673 LINC00304Q8N9R0 145 aa5.42□□□□□ -1.54
TCF4-240ENST00000568673 ACYP2P14621 99 aa5.42□□□□□ -1.54
TCF4-240ENST00000568673 SPAG11AQ6PDA7 123 aa5.42□□□□□ -1.54
TCF4-240ENST00000568673 SEC61BP60468 96 aaKnown RBP5.41□□□□□ -1.54
TCF4-240ENST00000568673 LINC01558Q9Y6Z2 57 aa5.41□□□□□ -1.54
TCF4-240ENST00000568673 CHKB-CPT1BH3BT56 60 aa5.4□□□□□ -1.55
TCF4-240ENST00000568673 DMAC1Q96GE9 116 aa5.4□□□□□ -1.55
TCF4-240ENST00000568673 RYR2Q92736 4967 aa5.39□□□□□ -1.55
TCF4-240ENST00000568673 LCE2CQ5TA81 110 aa5.38□□□□□ -1.55
TCF4-240ENST00000568673 PKHD1L1Q86WI1 4243 aa5.38□□□□□ -1.55
TCF4-240ENST00000568673 KRTAP10-4P60372 401 aaPredicted RBP5.37□□□□□ -1.55
TCF4-240ENST00000568673 KMT2CQ8NEZ4 4911 aaKnown RBP5.36□□□□□ -1.55
TCF4-240ENST00000568673 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
TCF4-240ENST00000568673 LORP23490 312 aaPredicted RBP5.34□□□□□ -1.56
TCF4-240ENST00000568673 A6NED7 52 aa5.33□□□□□ -1.56
TCF4-240ENST00000568673 A8MU10 97 aa5.32□□□□□ -1.56
TCF4-240ENST00000568673 LCA10Q71F78 164 aa5.3□□□□□ -1.56
TCF4-240ENST00000568673 C7orf65Q6ZTY9 151 aa5.29□□□□□ -1.56
TCF4-240ENST00000568673 KRTAP4-8Q9BYQ9 185 aa5.29□□□□□ -1.56
TCF4-240ENST00000568673 XP32Q5T750 250 aa5.28□□□□□ -1.56
TCF4-240ENST00000568673 CDC42SE1Q9NRR8 79 aa5.28□□□□□ -1.56
TCF4-240ENST00000568673 C9orf92A6NGG3 77 aa5.27□□□□□ -1.57
TCF4-240ENST00000568673 A8MUU9 505 aa5.27□□□□□ -1.57
TCF4-240ENST00000568673 C20orf166-AS1Q96NR2 134 aa5.27□□□□□ -1.57
TCF4-240ENST00000568673 SPINK7P58062 85 aa5.26□□□□□ -1.57
TCF4-240ENST00000568673 PMAIP1Q13794 54 aa5.25□□□□□ -1.57
TCF4-240ENST00000568673 ATP11AUNQ6ZP68 121 aa5.25□□□□□ -1.57
TCF4-240ENST00000568673 FAT3Q8TDW7 4589 aa5.23□□□□□ -1.57
TCF4-240ENST00000568673 A0A1B0GU69 56 aa5.22□□□□□ -1.57
TCF4-240ENST00000568673 SPTSSBQ8NFR3 76 aa5.22□□□□□ -1.57
TCF4-240ENST00000568673 LRP1Q07954 4544 aaKnown RBP5.22□□□□□ -1.57
TCF4-240ENST00000568673 TNXBP22105 4242 aa5.22□□□□□ -1.57
TCF4-240ENST00000568673 HSPG2P98160 4391 aa5.22□□□□□ -1.57
TCF4-240ENST00000568673 FLG2Q5D862 2391 aaPredicted RBP5.21□□□□□ -1.57
TCF4-240ENST00000568673 Q8N1X5 172 aa5.21□□□□□ -1.58
TCF4-240ENST00000568673 RYR3Q15413 4870 aa5.19□□□□□ -1.58
TCF4-240ENST00000568673 KRTAP10-8P60410 259 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms