RNA–Protein interactions for RNA: ENST00000568566.5

TSC2-223, Transcript of TSC complex subunit 2, human

TSL 3

Gene TSC2, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSC2-223	ENST00000568566	UBL5	Q9BZL1	73 aa		4.61	□□□□□ -1.67
TSC2-223	ENST00000568566	VPS25	Q9BRG1	176 aa		4.6	□□□□□ -1.67
TSC2-223	ENST00000568566	SEC61B	P60468	96 aa	Known RBP	4.59	□□□□□ -1.67
TSC2-223	ENST00000568566	ATP5EP2	Q5VTU8	51 aa		4.59	□□□□□ -1.67
TSC2-223	ENST00000568566		A0A087WSZ3	146 aa		4.58	□□□□□ -1.68
TSC2-223	ENST00000568566	C9orf92	A6NGG3	77 aa		4.58	□□□□□ -1.68
TSC2-223	ENST00000568566	LCE2C	Q5TA81	110 aa		4.58	□□□□□ -1.68
TSC2-223	ENST00000568566		Q5XG85	94 aa		4.58	□□□□□ -1.68
TSC2-223	ENST00000568566	LINC00643	Q86TS7	51 aa		4.58	□□□□□ -1.68
TSC2-223	ENST00000568566		Q96NJ1	140 aa		4.57	□□□□□ -1.68
TSC2-223	ENST00000568566	LIMD2	Q9BT23	127 aa		4.57	□□□□□ -1.68
TSC2-223	ENST00000568566	SS18L2	Q9UHA2	77 aa		4.57	□□□□□ -1.68
TSC2-223	ENST00000568566	DEFB116	Q30KQ4	102 aa		4.56	□□□□□ -1.68
TSC2-223	ENST00000568566	LINC00846	Q9NV44	126 aa		4.56	□□□□□ -1.68
TSC2-223	ENST00000568566	MT1H	P80294	61 aa		4.55	□□□□□ -1.68
TSC2-223	ENST00000568566	NREP	Q16612	68 aa		4.55	□□□□□ -1.68
TSC2-223	ENST00000568566	IMUP	Q9GZP8	106 aa		4.55	□□□□□ -1.68
TSC2-223	ENST00000568566	KRTAP19-2	Q3LHN2	52 aa		4.54	□□□□□ -1.68
TSC2-223	ENST00000568566	XP32	Q5T750	250 aa		4.54	□□□□□ -1.68
TSC2-223	ENST00000568566	SIGMAR1	Q99720	223 aa		4.54	□□□□□ -1.68
TSC2-223	ENST00000568566	CXCL6	P80162	114 aa		4.53	□□□□□ -1.68
TSC2-223	ENST00000568566		J3KT08	172 aa		4.52	□□□□□ -1.69
TSC2-223	ENST00000568566		Q6ZVQ6	151 aa		4.52	□□□□□ -1.69
TSC2-223	ENST00000568566	NOTCH2NL	Q7Z3S9	236 aa		4.51	□□□□□ -1.69
TSC2-223	ENST00000568566	LINC00472	Q9H8W2	130 aa		4.51	□□□□□ -1.69
TSC2-223	ENST00000568566	LOR	P23490	312 aa	Predicted RBP	4.5	□□□□□ -1.69
TSC2-223	ENST00000568566	KRTAP10-6	P60371	365 aa	Predicted RBP	4.5	□□□□□ -1.69
TSC2-223	ENST00000568566	BPY2	O14599	106 aa		4.49	□□□□□ -1.69
TSC2-223	ENST00000568566	SCGB1A1	P11684	91 aa		4.48	□□□□□ -1.69
TSC2-223	ENST00000568566	DSCR10	P59022	87 aa		4.48	□□□□□ -1.69
TSC2-223	ENST00000568566	MT-ATP8	P03928	68 aa		4.47	□□□□□ -1.69
TSC2-223	ENST00000568566	IGKV4-1	P06312	121 aa		4.47	□□□□□ -1.69
TSC2-223	ENST00000568566	PCOTH	Q58A44	107 aa		4.47	□□□□□ -1.69
TSC2-223	ENST00000568566	KRTAP9-7	A8MTY7	169 aa		4.46	□□□□□ -1.7
TSC2-223	ENST00000568566	NDUFB1	O75438	58 aa		4.46	□□□□□ -1.7
TSC2-223	ENST00000568566		M0R2T5	61 aa		4.45	□□□□□ -1.7
TSC2-223	ENST00000568566	IGKV3D-7	A0A0C4DH55	119 aa		4.44	□□□□□ -1.7
TSC2-223	ENST00000568566	KRTAP16-1	A8MUX0	517 aa		4.44	□□□□□ -1.7
TSC2-223	ENST00000568566	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	4.44	□□□□□ -1.7
TSC2-223	ENST00000568566	SSPO	A2VEC9	5147 aa		4.44	□□□□□ -1.7
TSC2-223	ENST00000568566		A8MWP4	228 aa		4.43	□□□□□ -1.7
TSC2-223	ENST00000568566	HIST1H4A	P62805	103 aa	Known RBP	4.43	□□□□□ -1.7
TSC2-223	ENST00000568566	IGHV6-1	A0A0B4J1U7	121 aa		4.42	□□□□□ -1.7
TSC2-223	ENST00000568566	RPL37	P61927	97 aa	Known RBP	4.42	□□□□□ -1.7
TSC2-223	ENST00000568566	FLG	P20930	4061 aa	Predicted RBP	4.41	□□□□□ -1.7
TSC2-223	ENST00000568566	SMIM20	Q8N5G0	67 aa		4.41	□□□□□ -1.7
TSC2-223	ENST00000568566	USH2A	O75445	5202 aa		4.41	□□□□□ -1.7
TSC2-223	ENST00000568566	COX6B2	Q6YFQ2	88 aa		4.4	□□□□□ -1.71
TSC2-223	ENST00000568566	PRR15	Q8IV56	129 aa		4.4	□□□□□ -1.71
TSC2-223	ENST00000568566		A0A1B0GVX0	72 aa		4.39	□□□□□ -1.71
TSC2-223	ENST00000568566		A8MUU9	505 aa		4.39	□□□□□ -1.71
TSC2-223	ENST00000568566	ATOX1	O00244	68 aa		4.39	□□□□□ -1.71
TSC2-223	ENST00000568566	LINC00313	P59037	77 aa		4.39	□□□□□ -1.71
TSC2-223	ENST00000568566		Q8N9L7	120 aa		4.39	□□□□□ -1.71
TSC2-223	ENST00000568566	FAM236A	A0A1B0GUQ0	79 aa		4.38	□□□□□ -1.71
TSC2-223	ENST00000568566	FAM236B	A0A1B0GV22	79 aa		4.38	□□□□□ -1.71
TSC2-223	ENST00000568566	C8orf87	E5RJ46	101 aa		4.38	□□□□□ -1.71
TSC2-223	ENST00000568566		K7EQZ3	153 aa		4.38	□□□□□ -1.71
TSC2-223	ENST00000568566	HCG22	E2RYF7	251 aa		4.37	□□□□□ -1.71
TSC2-223	ENST00000568566	C20orf166-AS1	Q96NR2	134 aa		4.37	□□□□□ -1.71
TSC2-223	ENST00000568566		Q75L30	129 aa		4.36	□□□□□ -1.71
TSC2-223	ENST00000568566	C8orf17	Q9NRJ1	99 aa		4.36	□□□□□ -1.71
TSC2-223	ENST00000568566		A0A087WVE0	104 aa		4.35	□□□□□ -1.71
TSC2-223	ENST00000568566	CASC2	Q6XLA1	102 aa		4.34	□□□□□ -1.71
TSC2-223	ENST00000568566	MMP24-AS1	A0A0U1RRL7	71 aa		4.33	□□□□□ -1.72
TSC2-223	ENST00000568566	hDV103S1	A0JD37	113 aa		4.33	□□□□□ -1.72
TSC2-223	ENST00000568566	TMEM254	Q8TBM7	123 aa		4.33	□□□□□ -1.72
TSC2-223	ENST00000568566	ANAPC13	Q9BS18	74 aa		4.33	□□□□□ -1.72
TSC2-223	ENST00000568566	TP53AIP1	Q9HCN2	124 aa		4.33	□□□□□ -1.72
TSC2-223	ENST00000568566	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.33	□□□□□ -1.72
TSC2-223	ENST00000568566	TRAV7	A0A075B6U4	112 aa		4.31	□□□□□ -1.72
TSC2-223	ENST00000568566	ATP11AUN	Q6ZP68	121 aa		4.31	□□□□□ -1.72
TSC2-223	ENST00000568566	SERP2	Q8N6R1	65 aa		4.31	□□□□□ -1.72
TSC2-223	ENST00000568566	WFDC13	Q8IUB5	93 aa		4.3	□□□□□ -1.72
TSC2-223	ENST00000568566	MRPL34	Q9BQ48	92 aa	Known RBP	4.3	□□□□□ -1.72
TSC2-223	ENST00000568566	UQCRQ	O14949	82 aa		4.29	□□□□□ -1.72
TSC2-223	ENST00000568566		Q8N9P0	234 aa	Predicted RBP	4.29	□□□□□ -1.72
TSC2-223	ENST00000568566	COX7C	P15954	63 aa		4.28	□□□□□ -1.72
TSC2-223	ENST00000568566	PCP4	P48539	62 aa		4.28	□□□□□ -1.72
TSC2-223	ENST00000568566	C5orf47	Q569G3	176 aa		4.28	□□□□□ -1.72
TSC2-223	ENST00000568566	OCR1	Q9BZK8	76 aa		4.28	□□□□□ -1.72
TSC2-223	ENST00000568566	SYNE2	Q8WXH0	6885 aa	Known RBP	4.27	□□□□□ -1.73
TSC2-223	ENST00000568566		H3BPC8	53 aa		4.27	□□□□□ -1.73
TSC2-223	ENST00000568566		H3BS24	57 aa		4.27	□□□□□ -1.73
TSC2-223	ENST00000568566		Q5W150	140 aa		4.27	□□□□□ -1.73
TSC2-223	ENST00000568566	ZCCHC13	Q8WW36	166 aa	Known RBP	4.26	□□□□□ -1.73
TSC2-223	ENST00000568566	MACF1	Q9UPN3	7388 aa	Known RBP	4.26	□□□□□ -1.73
TSC2-223	ENST00000568566	HRES1	P13985	223 aa		4.25	□□□□□ -1.73
TSC2-223	ENST00000568566	MP68	P56378	58 aa		4.25	□□□□□ -1.73
TSC2-223	ENST00000568566	NDUFS5	O43920	106 aa		4.24	□□□□□ -1.73
TSC2-223	ENST00000568566	KRTAP9-8	Q9BYQ0	159 aa		4.24	□□□□□ -1.73
TSC2-223	ENST00000568566	TRAV22	A0A0B4J277	110 aa		4.23	□□□□□ -1.73
TSC2-223	ENST00000568566	NDUFC1	O43677	76 aa		4.22	□□□□□ -1.73
TSC2-223	ENST00000568566	KRTAP19-1	Q8IUB9	90 aa		4.22	□□□□□ -1.73
TSC2-223	ENST00000568566	SPINK7	P58062	85 aa		4.21	□□□□□ -1.74
TSC2-223	ENST00000568566	KLKP1	Q107X0	134 aa		4.21	□□□□□ -1.74
TSC2-223	ENST00000568566	MPLKIP	Q8TAP9	179 aa		4.2	□□□□□ -1.74
TSC2-223	ENST00000568566	LOC101927531	A0A1B0GV80	90 aa		4.19	□□□□□ -1.74
TSC2-223	ENST00000568566		H0Y9P7	68 aa		4.19	□□□□□ -1.74
TSC2-223	ENST00000568566	C20orf197	Q8N268	126 aa		4.19	□□□□□ -1.74

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