RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
PTPN9-205ENST00000568108 ERC2-IT1O76042 136 aa3.79□□□□□ -1.8
PTPN9-205ENST00000568108 SS18L2Q9UHA2 77 aa3.79□□□□□ -1.8
PTPN9-205ENST00000568108 A0A1W2PNM2 257 aa3.78□□□□□ -1.8
PTPN9-205ENST00000568108 NDUFC1O43677 76 aa3.78□□□□□ -1.8
PTPN9-205ENST00000568108 SMIM29Q86T20 159 aa3.78□□□□□ -1.8
PTPN9-205ENST00000568108 IGKV4-1P06312 121 aa3.76□□□□□ -1.81
PTPN9-205ENST00000568108 IGFL1Q6UW32 110 aa3.76□□□□□ -1.81
PTPN9-205ENST00000568108 J3KT08 172 aa3.75□□□□□ -1.81
PTPN9-205ENST00000568108 ZNF861PO60384 105 aa3.75□□□□□ -1.81
PTPN9-205ENST00000568108 ATP5EP56381 51 aaPredicted RBP3.75□□□□□ -1.81
PTPN9-205ENST00000568108 C20orf197Q8N268 126 aa3.75□□□□□ -1.81
PTPN9-205ENST00000568108 MUC2Q02817 5179 aa3.75□□□□□ -1.81
PTPN9-205ENST00000568108 KLKP1Q107X0 134 aa3.74□□□□□ -1.81
PTPN9-205ENST00000568108 KRTAP13-1Q8IUC0 172 aa3.74□□□□□ -1.81
PTPN9-205ENST00000568108 A0A087WSZ3 146 aa3.73□□□□□ -1.81
PTPN9-205ENST00000568108 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
PTPN9-205ENST00000568108 RPS28P62857 69 aaKnown RBP3.73□□□□□ -1.81
PTPN9-205ENST00000568108 LINC00483Q53H64 154 aa3.73□□□□□ -1.81
PTPN9-205ENST00000568108 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
PTPN9-205ENST00000568108 Q8N9L7 120 aa3.72□□□□□ -1.81
PTPN9-205ENST00000568108 TYMSOSQ8TAI1 123 aa3.72□□□□□ -1.81
PTPN9-205ENST00000568108 A0A087X002 238 aa3.71□□□□□ -1.82
PTPN9-205ENST00000568108 FAM236DA0A1B0GTK5 79 aa3.71□□□□□ -1.82
PTPN9-205ENST00000568108 NDUFB1O75438 58 aa3.71□□□□□ -1.82
PTPN9-205ENST00000568108 FAM236CP0DP71 79 aa3.71□□□□□ -1.82
PTPN9-205ENST00000568108 DSCR10P59022 87 aa3.71□□□□□ -1.82
PTPN9-205ENST00000568108 TMEM254Q8TBM7 123 aa3.71□□□□□ -1.82
PTPN9-205ENST00000568108 OCR1Q9BZK8 76 aa3.71□□□□□ -1.82
PTPN9-205ENST00000568108 A8MWP4 228 aa3.7□□□□□ -1.82
PTPN9-205ENST00000568108 K7EQZ3 153 aa3.7□□□□□ -1.82
PTPN9-205ENST00000568108 IGLV9-49A0A0B4J1Y8 123 aa3.69□□□□□ -1.82
PTPN9-205ENST00000568108 C5orf47Q569G3 176 aa3.69□□□□□ -1.82
PTPN9-205ENST00000568108 RETNLBQ9BQ08 111 aa3.69□□□□□ -1.82
PTPN9-205ENST00000568108 ANAPC11Q9NYG5 84 aa3.69□□□□□ -1.82
PTPN9-205ENST00000568108 FAT4Q6V0I7 4981 aa3.68□□□□□ -1.82
PTPN9-205ENST00000568108 H7BZZ5 65 aa3.68□□□□□ -1.82
PTPN9-205ENST00000568108 MP68P56378 58 aa3.68□□□□□ -1.82
PTPN9-205ENST00000568108 PRR15Q8IV56 129 aa3.68□□□□□ -1.82
PTPN9-205ENST00000568108 IGLV7-46A0A075B6I9 117 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 H3BPC8 53 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 MOBPQ13875 183 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 KRTAP13-2Q52LG2 175 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 CASC2Q6XLA1 102 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 LINC00304Q8N9R0 145 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 MPLKIPQ8TAP9 179 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 LINC00472Q9H8W2 130 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 SNURFQ9Y675 71 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
PTPN9-205ENST00000568108 CD164Q04900 197 aa3.66□□□□□ -1.82
PTPN9-205ENST00000568108 TPRXLQ17RH7 258 aa3.66□□□□□ -1.82
PTPN9-205ENST00000568108 FAM229BQ4G0N7 80 aa3.66□□□□□ -1.82
PTPN9-205ENST00000568108 CYSTM1Q9H1C7 97 aa3.66□□□□□ -1.82
PTPN9-205ENST00000568108 A0A0G2JQZ4 141 aa3.65□□□□□ -1.83
PTPN9-205ENST00000568108 SEC61BP60468 96 aaKnown RBP3.65□□□□□ -1.83
PTPN9-205ENST00000568108 SSBP3-AS1Q7Z2R9 100 aa3.65□□□□□ -1.83
PTPN9-205ENST00000568108 WFDC13Q8IUB5 93 aa3.65□□□□□ -1.83
PTPN9-205ENST00000568108 DEFB116Q30KQ4 102 aa3.64□□□□□ -1.83
PTPN9-205ENST00000568108 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
PTPN9-205ENST00000568108 hDV103S1A0JD37 113 aa3.62□□□□□ -1.83
PTPN9-205ENST00000568108 MMP24-AS1A0A0U1RRL7 71 aa3.61□□□□□ -1.83
PTPN9-205ENST00000568108 A0A1B0GVX0 72 aa3.61□□□□□ -1.83
PTPN9-205ENST00000568108 H0Y9P7 68 aa3.61□□□□□ -1.83
PTPN9-205ENST00000568108 ASB16-AS1Q495Z4 193 aa3.61□□□□□ -1.83
PTPN9-205ENST00000568108 SPAG11AQ6PDA7 123 aa3.61□□□□□ -1.83
PTPN9-205ENST00000568108 HRCT1Q6UXD1 115 aa3.61□□□□□ -1.83
PTPN9-205ENST00000568108 Q75L30 129 aa3.61□□□□□ -1.83
PTPN9-205ENST00000568108 SMIM26A0A096LP01 95 aa3.6□□□□□ -1.83
PTPN9-205ENST00000568108 TRAV22A0A0B4J277 110 aa3.6□□□□□ -1.83
PTPN9-205ENST00000568108 C8orf87E5RJ46 101 aa3.6□□□□□ -1.83
PTPN9-205ENST00000568108 ZCCHC13Q8WW36 166 aaKnown RBP3.6□□□□□ -1.83
PTPN9-205ENST00000568108 Q96NJ1 140 aa3.6□□□□□ -1.83
PTPN9-205ENST00000568108 LIMD2Q9BT23 127 aa3.6□□□□□ -1.83
PTPN9-205ENST00000568108 C8orf17Q9NRJ1 99 aa3.6□□□□□ -1.83
PTPN9-205ENST00000568108 MUC17Q685J3 4493 aa3.59□□□□□ -1.83
PTPN9-205ENST00000568108 LOC100996750A0A140TA64 210 aa3.59□□□□□ -1.83
PTPN9-205ENST00000568108 FP248Q71RG6 208 aaPredicted RBP3.59□□□□□ -1.83
PTPN9-205ENST00000568108 KRTAP4-6Q9BYQ5 205 aa3.59□□□□□ -1.83
PTPN9-205ENST00000568108 IGHV6-1A0A0B4J1U7 121 aa3.58□□□□□ -1.84
PTPN9-205ENST00000568108 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
PTPN9-205ENST00000568108 Q5XG85 94 aa3.58□□□□□ -1.84
PTPN9-205ENST00000568108 SPANXA2-OT1Q8N9U9 137 aa3.58□□□□□ -1.84
PTPN9-205ENST00000568108 LINC00208Q96KT6 92 aa3.58□□□□□ -1.84
PTPN9-205ENST00000568108 MRPL34Q9BQ48 92 aaKnown RBP3.58□□□□□ -1.84
PTPN9-205ENST00000568108 FSIP2Q5CZC0 6907 aa3.57□□□□□ -1.84
PTPN9-205ENST00000568108 NDUFS5O43920 106 aa3.57□□□□□ -1.84
PTPN9-205ENST00000568108 C1orf64Q8NEQ6 169 aa3.57□□□□□ -1.84
PTPN9-205ENST00000568108 KRTAP4-1Q9BYQ7 146 aa3.57□□□□□ -1.84
PTPN9-205ENST00000568108 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
PTPN9-205ENST00000568108 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
PTPN9-205ENST00000568108 CYP4F30PQ9H0H9 118 aa3.56□□□□□ -1.84
PTPN9-205ENST00000568108 SPINK1P00995 79 aa3.55□□□□□ -1.84
PTPN9-205ENST00000568108 LOC101927531A0A1B0GV80 90 aa3.53□□□□□ -1.84
PTPN9-205ENST00000568108 RPS29P62273 56 aaKnown RBP3.53□□□□□ -1.84
PTPN9-205ENST00000568108 LINC00313P59037 77 aa3.52□□□□□ -1.85
PTPN9-205ENST00000568108 V9GYY9 64 aa3.52□□□□□ -1.85
PTPN9-205ENST00000568108 C1orf195Q5TG92 126 aa3.5□□□□□ -1.85
PTPN9-205ENST00000568108 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
PTPN9-205ENST00000568108 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
PTPN9-205ENST00000568108 KRTAP9-7A8MTY7 169 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms