RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 K7EQZ3 153 aa8.58□□□□□ -1.04
COMMD4-221ENST00000567935 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
COMMD4-221ENST00000567935 ASB16-AS1Q495Z4 193 aa8.57□□□□□ -1.04
COMMD4-221ENST00000567935 NDUFB1O75438 58 aa8.56□□□□□ -1.04
COMMD4-221ENST00000567935 HRCT1Q6UXD1 115 aa8.56□□□□□ -1.04
COMMD4-221ENST00000567935 FAT4Q6V0I7 4981 aa8.55□□□□□ -1.04
COMMD4-221ENST00000567935 A0A087X002 238 aa8.55□□□□□ -1.04
COMMD4-221ENST00000567935 MT1HL1P0DM35 61 aa8.55□□□□□ -1.04
COMMD4-221ENST00000567935 KRTAP13-2Q52LG2 175 aa8.55□□□□□ -1.04
COMMD4-221ENST00000567935 Q5XG85 94 aa8.55□□□□□ -1.04
COMMD4-221ENST00000567935 PRR15Q8IV56 129 aa8.55□□□□□ -1.04
COMMD4-221ENST00000567935 HCG22E2RYF7 251 aa8.54□□□□□ -1.04
COMMD4-221ENST00000567935 DEFB116Q30KQ4 102 aa8.53□□□□□ -1.04
COMMD4-221ENST00000567935 Q96NJ1 140 aa8.53□□□□□ -1.04
COMMD4-221ENST00000567935 CCDC179H3BU77 68 aa8.52□□□□□ -1.05
COMMD4-221ENST00000567935 LIMD2Q9BT23 127 aa8.51□□□□□ -1.05
COMMD4-221ENST00000567935 TYMSOSQ8TAI1 123 aa8.5□□□□□ -1.05
COMMD4-221ENST00000567935 C4orf48Q5BLP8 95 aa8.49□□□□□ -1.05
COMMD4-221ENST00000567935 SPAG11AQ6PDA7 123 aa8.47□□□□□ -1.05
COMMD4-221ENST00000567935 OCR1Q9BZK8 76 aa8.47□□□□□ -1.05
COMMD4-221ENST00000567935 SPINK1P00995 79 aa8.46□□□□□ -1.06
COMMD4-221ENST00000567935 RPS29P62273 56 aaKnown RBP8.46□□□□□ -1.06
COMMD4-221ENST00000567935 A0A1B0GVX0 72 aa8.45□□□□□ -1.06
COMMD4-221ENST00000567935 CASC2Q6XLA1 102 aa8.45□□□□□ -1.06
COMMD4-221ENST00000567935 MMP24-AS1A0A0U1RRL7 71 aa8.42□□□□□ -1.06
COMMD4-221ENST00000567935 WFDC13Q8IUB5 93 aa8.42□□□□□ -1.06
COMMD4-221ENST00000567935 C8orf17Q9NRJ1 99 aa8.41□□□□□ -1.06
COMMD4-221ENST00000567935 hDV103S1A0JD37 113 aa8.4□□□□□ -1.06
COMMD4-221ENST00000567935 C8orf87E5RJ46 101 aa8.4□□□□□ -1.06
COMMD4-221ENST00000567935 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.06
COMMD4-221ENST00000567935 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.06
COMMD4-221ENST00000567935 LPAP08519 4548 aa8.39□□□□□ -1.07
COMMD4-221ENST00000567935 KLKP1Q107X0 134 aa8.39□□□□□ -1.07
COMMD4-221ENST00000567935 C20orf197Q8N268 126 aa8.39□□□□□ -1.07
COMMD4-221ENST00000567935 IGHV6-1A0A0B4J1U7 121 aa8.37□□□□□ -1.07
COMMD4-221ENST00000567935 C5orf47Q569G3 176 aa8.37□□□□□ -1.07
COMMD4-221ENST00000567935 C1orf195Q5TG92 126 aa8.37□□□□□ -1.07
COMMD4-221ENST00000567935 NDUFC1O43677 76 aa8.36□□□□□ -1.07
COMMD4-221ENST00000567935 TMEM254Q8TBM7 123 aa8.36□□□□□ -1.07
COMMD4-221ENST00000567935 MUC2Q02817 5179 aa8.36□□□□□ -1.07
COMMD4-221ENST00000567935 TP53AIP1Q9HCN2 124 aa8.35□□□□□ -1.07
COMMD4-221ENST00000567935 MRPL34Q9BQ48 92 aaKnown RBP8.33□□□□□ -1.08
COMMD4-221ENST00000567935 A0A0U1RQV1 116 aa8.31□□□□□ -1.08
COMMD4-221ENST00000567935 H3BPC8 53 aa8.31□□□□□ -1.08
COMMD4-221ENST00000567935 MP68P56378 58 aa8.31□□□□□ -1.08
COMMD4-221ENST00000567935 TMEM258P61165 79 aa8.31□□□□□ -1.08
COMMD4-221ENST00000567935 LINC00313P59037 77 aa8.28□□□□□ -1.08
COMMD4-221ENST00000567935 SNURFQ9Y675 71 aa8.27□□□□□ -1.09
COMMD4-221ENST00000567935 CYSTM1Q9H1C7 97 aa8.26□□□□□ -1.09
COMMD4-221ENST00000567935 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
COMMD4-221ENST00000567935 H7BZZ5 65 aa8.25□□□□□ -1.09
COMMD4-221ENST00000567935 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
COMMD4-221ENST00000567935 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
COMMD4-221ENST00000567935 ZCCHC13Q8WW36 166 aaKnown RBP8.24□□□□□ -1.09
COMMD4-221ENST00000567935 H0Y9P7 68 aa8.23□□□□□ -1.09
COMMD4-221ENST00000567935 NDUFS5O43920 106 aa8.23□□□□□ -1.09
COMMD4-221ENST00000567935 ATP5EP56381 51 aaPredicted RBP8.21□□□□□ -1.1
COMMD4-221ENST00000567935 KRTAP10-8P60410 259 aa8.21□□□□□ -1.1
COMMD4-221ENST00000567935 Q8N9P0 234 aaPredicted RBP8.2□□□□□ -1.1
COMMD4-221ENST00000567935 LINC00208Q96KT6 92 aa8.18□□□□□ -1.1
COMMD4-221ENST00000567935 FAM236DA0A1B0GTK5 79 aa8.17□□□□□ -1.1
COMMD4-221ENST00000567935 FAM236CP0DP71 79 aa8.17□□□□□ -1.1
COMMD4-221ENST00000567935 KRTAP16-1A8MUX0 517 aa8.16□□□□□ -1.1
COMMD4-221ENST00000567935 C1orf64Q8NEQ6 169 aa8.15□□□□□ -1.1
COMMD4-221ENST00000567935 CRCT1Q9UGL9 99 aa8.14□□□□□ -1.11
COMMD4-221ENST00000567935 FSIP2Q5CZC0 6907 aa8.14□□□□□ -1.11
COMMD4-221ENST00000567935 LOC101927531A0A1B0GV80 90 aa8.11□□□□□ -1.11
COMMD4-221ENST00000567935 RPS28P62857 69 aaKnown RBP8.11□□□□□ -1.11
COMMD4-221ENST00000567935 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
COMMD4-221ENST00000567935 KRTAP13-3Q3SY46 172 aa8.09□□□□□ -1.11
COMMD4-221ENST00000567935 SPANXA2-OT1Q8N9U9 137 aa8.08□□□□□ -1.12
COMMD4-221ENST00000567935 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
COMMD4-221ENST00000567935 Q5W150 140 aa8.04□□□□□ -1.12
COMMD4-221ENST00000567935 CYP4F30PQ9H0H9 118 aa8.03□□□□□ -1.12
COMMD4-221ENST00000567935 C20orf166-AS1Q96NR2 134 aa8.02□□□□□ -1.13
COMMD4-221ENST00000567935 RETNLBQ9BQ08 111 aa8.02□□□□□ -1.13
COMMD4-221ENST00000567935 A8MUU9 505 aa8.01□□□□□ -1.13
COMMD4-221ENST00000567935 LCE2DQ5TA82 110 aaPredicted RBP8□□□□□ -1.13
COMMD4-221ENST00000567935 IGKV2-30P06310 120 aa7.98□□□□□ -1.13
COMMD4-221ENST00000567935 IGLV7-46A0A075B6I9 117 aa7.97□□□□□ -1.13
COMMD4-221ENST00000567935 C9orf92A6NGG3 77 aa7.96□□□□□ -1.14
COMMD4-221ENST00000567935 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
COMMD4-221ENST00000567935 Q75L30 129 aa7.95□□□□□ -1.14
COMMD4-221ENST00000567935 C7orf65Q6ZTY9 151 aa7.89□□□□□ -1.15
COMMD4-221ENST00000567935 SMIM26A0A096LP01 95 aa7.87□□□□□ -1.15
COMMD4-221ENST00000567935 PRR4Q16378 134 aa7.87□□□□□ -1.15
COMMD4-221ENST00000567935 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
COMMD4-221ENST00000567935 MUC17Q685J3 4493 aa7.86□□□□□ -1.15
COMMD4-221ENST00000567935 HRES1P13985 223 aa7.84□□□□□ -1.15
COMMD4-221ENST00000567935 RPL37P61927 97 aaKnown RBP7.82□□□□□ -1.16
COMMD4-221ENST00000567935 TPRXLQ17RH7 258 aa7.81□□□□□ -1.16
COMMD4-221ENST00000567935 ATP11AUNQ6ZP68 121 aa7.81□□□□□ -1.16
COMMD4-221ENST00000567935 ACYP2P14621 99 aa7.79□□□□□ -1.16
COMMD4-221ENST00000567935 XP32Q5T750 250 aa7.79□□□□□ -1.16
COMMD4-221ENST00000567935 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
COMMD4-221ENST00000567935 COA5Q86WW8 74 aa7.77□□□□□ -1.17
COMMD4-221ENST00000567935 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
COMMD4-221ENST00000567935 A8MUN3 132 aa7.75□□□□□ -1.17
COMMD4-221ENST00000567935 SPINK7P58062 85 aa7.74□□□□□ -1.17
COMMD4-221ENST00000567935 V9GYY9 64 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms