RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 MTURNQ8N3F0 131 aa9.95□□□□□ -0.82
GTF3C1-207ENST00000567806 PRO0461Q9UI25 63 aa9.95□□□□□ -0.82
GTF3C1-207ENST00000567806 A0A1W2PNM2 257 aa9.93□□□□□ -0.82
GTF3C1-207ENST00000567806 Q6ZQT0 140 aa9.93□□□□□ -0.82
GTF3C1-207ENST00000567806 VPS25Q9BRG1 176 aa9.93□□□□□ -0.82
GTF3C1-207ENST00000567806 C14orf132Q9NPU4 83 aa9.93□□□□□ -0.82
GTF3C1-207ENST00000567806 A0A087WSZ3 146 aa9.92□□□□□ -0.82
GTF3C1-207ENST00000567806 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
GTF3C1-207ENST00000567806 ATP11AUNQ6ZP68 121 aa9.88□□□□□ -0.83
GTF3C1-207ENST00000567806 FLGP20930 4061 aaPredicted RBP9.87□□□□□ -0.83
GTF3C1-207ENST00000567806 A0A1B0GV90 55 aa9.86□□□□□ -0.83
GTF3C1-207ENST00000567806 ETDBQ3ZM63 59 aa9.83□□□□□ -0.84
GTF3C1-207ENST00000567806 Q75L30 129 aa9.82□□□□□ -0.84
GTF3C1-207ENST00000567806 J3KT08 172 aa9.81□□□□□ -0.84
GTF3C1-207ENST00000567806 NREPQ16612 68 aa9.78□□□□□ -0.84
GTF3C1-207ENST00000567806 Q96NJ1 140 aa9.76□□□□□ -0.85
GTF3C1-207ENST00000567806 ACYP1P07311 99 aa9.75□□□□□ -0.85
GTF3C1-207ENST00000567806 LINC00472Q9H8W2 130 aa9.75□□□□□ -0.85
GTF3C1-207ENST00000567806 UBL5Q9BZL1 73 aa9.74□□□□□ -0.85
GTF3C1-207ENST00000567806 IGKV4-1P06312 121 aa9.73□□□□□ -0.85
GTF3C1-207ENST00000567806 NDUFB1O75438 58 aa9.72□□□□□ -0.85
GTF3C1-207ENST00000567806 SIGMAR1Q99720 223 aa9.72□□□□□ -0.85
GTF3C1-207ENST00000567806 J3QR89 54 aa9.71□□□□□ -0.86
GTF3C1-207ENST00000567806 FAM240AA0A1B0GVK7 77 aa9.69□□□□□ -0.86
GTF3C1-207ENST00000567806 C20orf166-AS1Q96NR2 134 aa9.66□□□□□ -0.86
GTF3C1-207ENST00000567806 A8MUU9 505 aa9.64□□□□□ -0.87
GTF3C1-207ENST00000567806 C8orf87E5RJ46 101 aa9.64□□□□□ -0.87
GTF3C1-207ENST00000567806 BPY2O14599 106 aa9.64□□□□□ -0.87
GTF3C1-207ENST00000567806 Q6ZVQ6 151 aa9.64□□□□□ -0.87
GTF3C1-207ENST00000567806 A8MWP4 228 aa9.63□□□□□ -0.87
GTF3C1-207ENST00000567806 LINC00846Q9NV44 126 aa9.62□□□□□ -0.87
GTF3C1-207ENST00000567806 LINC00313P59037 77 aa9.61□□□□□ -0.87
GTF3C1-207ENST00000567806 DEFB116Q30KQ4 102 aa9.61□□□□□ -0.87
GTF3C1-207ENST00000567806 A0A1B0GVX0 72 aa9.6□□□□□ -0.87
GTF3C1-207ENST00000567806 KRTAP9-8Q9BYQ0 159 aa9.59□□□□□ -0.87
GTF3C1-207ENST00000567806 IGHV6-1A0A0B4J1U7 121 aa9.57□□□□□ -0.88
GTF3C1-207ENST00000567806 DSCR10P59022 87 aa9.56□□□□□ -0.88
GTF3C1-207ENST00000567806 CXCL6P80162 114 aa9.55□□□□□ -0.88
GTF3C1-207ENST00000567806 PRR15Q8IV56 129 aa9.55□□□□□ -0.88
GTF3C1-207ENST00000567806 ATP5EP2Q5VTU8 51 aa9.54□□□□□ -0.88
GTF3C1-207ENST00000567806 IGKV3D-7A0A0C4DH55 119 aa9.51□□□□□ -0.89
GTF3C1-207ENST00000567806 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
GTF3C1-207ENST00000567806 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
GTF3C1-207ENST00000567806 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.5□□□□□ -0.89
GTF3C1-207ENST00000567806 K7ERU9 68 aa9.5□□□□□ -0.89
GTF3C1-207ENST00000567806 USH2AO75445 5202 aa9.49□□□□□ -0.89
GTF3C1-207ENST00000567806 KRTAP9-7A8MTY7 169 aa9.48□□□□□ -0.89
GTF3C1-207ENST00000567806 C8orf17Q9NRJ1 99 aa9.48□□□□□ -0.89
GTF3C1-207ENST00000567806 LINC00643Q86TS7 51 aa9.47□□□□□ -0.89
GTF3C1-207ENST00000567806 K7EQZ3 153 aa9.46□□□□□ -0.9
GTF3C1-207ENST00000567806 SSPOA2VEC9 5147 aa9.45□□□□□ -0.9
GTF3C1-207ENST00000567806 KRTAP16-1A8MUX0 517 aa9.45□□□□□ -0.9
GTF3C1-207ENST00000567806 RBM12B-AS1Q9P1G2 102 aa9.45□□□□□ -0.9
GTF3C1-207ENST00000567806 TMEM254Q8TBM7 123 aa9.43□□□□□ -0.9
GTF3C1-207ENST00000567806 MT2AP02795 61 aa9.42□□□□□ -0.9
GTF3C1-207ENST00000567806 hDV103S1A0JD37 113 aa9.41□□□□□ -0.9
GTF3C1-207ENST00000567806 MRPL34Q9BQ48 92 aaKnown RBP9.39□□□□□ -0.91
GTF3C1-207ENST00000567806 MMP24-AS1A0A0U1RRL7 71 aa9.38□□□□□ -0.91
GTF3C1-207ENST00000567806 NOTCH2NLQ7Z3S9 236 aa9.38□□□□□ -0.91
GTF3C1-207ENST00000567806 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
GTF3C1-207ENST00000567806 HCG22E2RYF7 251 aa9.37□□□□□ -0.91
GTF3C1-207ENST00000567806 HRES1P13985 223 aa9.37□□□□□ -0.91
GTF3C1-207ENST00000567806 CASC2Q6XLA1 102 aa9.37□□□□□ -0.91
GTF3C1-207ENST00000567806 KRTAP10-10P60014 251 aa9.36□□□□□ -0.91
GTF3C1-207ENST00000567806 MPLKIPQ8TAP9 179 aa9.36□□□□□ -0.91
GTF3C1-207ENST00000567806 MT1FP04733 61 aa9.34□□□□□ -0.91
GTF3C1-207ENST00000567806 Q8N9L7 120 aa9.34□□□□□ -0.91
GTF3C1-207ENST00000567806 LCE2BO14633 110 aa9.31□□□□□ -0.92
GTF3C1-207ENST00000567806 HIST1H4AP62805 103 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-207ENST00000567806 FCGBPQ9Y6R7 5405 aaPredicted RBP9.3□□□□□ -0.92
GTF3C1-207ENST00000567806 WFDC13Q8IUB5 93 aa9.3□□□□□ -0.92
GTF3C1-207ENST00000567806 KRTAP9-3Q9BYQ3 159 aa9.3□□□□□ -0.92
GTF3C1-207ENST00000567806 NDUFS5O43920 106 aa9.29□□□□□ -0.92
GTF3C1-207ENST00000567806 KRTAP19-1Q8IUB9 90 aa9.29□□□□□ -0.92
GTF3C1-207ENST00000567806 TP53AIP1Q9HCN2 124 aa9.27□□□□□ -0.93
GTF3C1-207ENST00000567806 ZCCHC13Q8WW36 166 aaKnown RBP9.26□□□□□ -0.93
GTF3C1-207ENST00000567806 IMUPQ9GZP8 106 aa9.26□□□□□ -0.93
GTF3C1-207ENST00000567806 SPINK7P58062 85 aa9.19□□□□□ -0.94
GTF3C1-207ENST00000567806 A0A087WVE0 104 aa9.11□□□□□ -0.95
GTF3C1-207ENST00000567806 UQCRQO14949 82 aa9.1□□□□□ -0.95
GTF3C1-207ENST00000567806 SCGB1A1P11684 91 aa9.1□□□□□ -0.95
GTF3C1-207ENST00000567806 MACF1Q9UPN3 7388 aaKnown RBP9.1□□□□□ -0.95
GTF3C1-207ENST00000567806 MT-ATP8P03928 68 aa9.07□□□□□ -0.96
GTF3C1-207ENST00000567806 ATOX1O00244 68 aa9.05□□□□□ -0.96
GTF3C1-207ENST00000567806 C7orf65Q6ZTY9 151 aa9.05□□□□□ -0.96
GTF3C1-207ENST00000567806 TRAV22A0A0B4J277 110 aa9.04□□□□□ -0.96
GTF3C1-207ENST00000567806 KRTAP19-6Q3LI70 58 aa9.04□□□□□ -0.96
GTF3C1-207ENST00000567806 SMIM20Q8N5G0 67 aa9.04□□□□□ -0.96
GTF3C1-207ENST00000567806 SYNE2Q8WXH0 6885 aaKnown RBP9.04□□□□□ -0.96
GTF3C1-207ENST00000567806 Q5W150 140 aa9.02□□□□□ -0.97
GTF3C1-207ENST00000567806 IGKV2D-30A0A075B6S6 120 aa8.98□□□□□ -0.97
GTF3C1-207ENST00000567806 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
GTF3C1-207ENST00000567806 IGKV2-30P06310 120 aa8.98□□□□□ -0.97
GTF3C1-207ENST00000567806 MP68P56378 58 aa8.98□□□□□ -0.97
GTF3C1-207ENST00000567806 C5orf47Q569G3 176 aa8.98□□□□□ -0.97
GTF3C1-207ENST00000567806 OCR1Q9BZK8 76 aa8.97□□□□□ -0.97
GTF3C1-207ENST00000567806 FAM236AA0A1B0GUQ0 79 aa8.95□□□□□ -0.98
GTF3C1-207ENST00000567806 FAM236BA0A1B0GV22 79 aa8.95□□□□□ -0.98
GTF3C1-207ENST00000567806 H3BPC8 53 aa8.95□□□□□ -0.98
GTF3C1-207ENST00000567806 H0Y9P7 68 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms