RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 HRES1P13985 223 aa7.48□□□□□ -1.21
RNF40-209ENST00000566703 NOTCH2NLQ7Z3S9 236 aa7.48□□□□□ -1.21
RNF40-209ENST00000566703 C9orf118A6NHY6 69 aa7.47□□□□□ -1.21
RNF40-209ENST00000566703 TRACP01848 142 aa7.46□□□□□ -1.22
RNF40-209ENST00000566703 CCKP06307 115 aa7.45□□□□□ -1.22
RNF40-209ENST00000566703 COX6CP09669 75 aa7.45□□□□□ -1.22
RNF40-209ENST00000566703 C8orf87E5RJ46 101 aa7.44□□□□□ -1.22
RNF40-209ENST00000566703 PSMB2P49721 201 aa7.44□□□□□ -1.22
RNF40-209ENST00000566703 DEFB116Q30KQ4 102 aa7.44□□□□□ -1.22
RNF40-209ENST00000566703 IGHV6-1A0A0B4J1U7 121 aa7.43□□□□□ -1.22
RNF40-209ENST00000566703 K7EP34 96 aa7.42□□□□□ -1.22
RNF40-209ENST00000566703 MT1FP04733 61 aa7.42□□□□□ -1.22
RNF40-209ENST00000566703 A0A1B0GV72 72 aa7.41□□□□□ -1.22
RNF40-209ENST00000566703 MTURNQ8N3F0 131 aa7.41□□□□□ -1.22
RNF40-209ENST00000566703 KRTAP9-3Q9BYQ3 159 aa7.41□□□□□ -1.22
RNF40-209ENST00000566703 LCE2BO14633 110 aa7.4□□□□□ -1.22
RNF40-209ENST00000566703 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
RNF40-209ENST00000566703 VPS25Q9BRG1 176 aa7.4□□□□□ -1.22
RNF40-209ENST00000566703 USH2AO75445 5202 aa7.4□□□□□ -1.23
RNF40-209ENST00000566703 A0A1B0GVX0 72 aa7.39□□□□□ -1.23
RNF40-209ENST00000566703 SCGB1A1P11684 91 aa7.39□□□□□ -1.23
RNF40-209ENST00000566703 A0A1W2PPM0 123 aa7.38□□□□□ -1.23
RNF40-209ENST00000566703 C21orf62-AS1Q17RA5 79 aa7.38□□□□□ -1.23
RNF40-209ENST00000566703 RBM3P98179 157 aaKnown RBP7.37□□□□□ -1.23
RNF40-209ENST00000566703 F8W1H4 67 aa7.36□□□□□ -1.23
RNF40-209ENST00000566703 J3KT08 172 aa7.36□□□□□ -1.23
RNF40-209ENST00000566703 J3QR89 54 aa7.36□□□□□ -1.23
RNF40-209ENST00000566703 KRTAP19-1Q8IUB9 90 aa7.36□□□□□ -1.23
RNF40-209ENST00000566703 SSPOA2VEC9 5147 aa7.36□□□□□ -1.23
RNF40-209ENST00000566703 K7ERJ3 54 aa7.35□□□□□ -1.23
RNF40-209ENST00000566703 ZCCHC13Q8WW36 166 aaKnown RBP7.35□□□□□ -1.23
RNF40-209ENST00000566703 DSCR8Q96T75 97 aa7.35□□□□□ -1.23
RNF40-209ENST00000566703 SPCS1Q9Y6A9 102 aa7.34□□□□□ -1.23
RNF40-209ENST00000566703 SPINK7P58062 85 aa7.33□□□□□ -1.24
RNF40-209ENST00000566703 SCGB1C2P0DMR2 95 aa7.31□□□□□ -1.24
RNF40-209ENST00000566703 Q8N9P0 234 aaPredicted RBP7.31□□□□□ -1.24
RNF40-209ENST00000566703 C9JAW5 83 aa7.3□□□□□ -1.24
RNF40-209ENST00000566703 NDUFB1O75438 58 aa7.3□□□□□ -1.24
RNF40-209ENST00000566703 Q6ZQT0 140 aa7.29□□□□□ -1.24
RNF40-209ENST00000566703 LINC00846Q9NV44 126 aa7.29□□□□□ -1.24
RNF40-209ENST00000566703 FCGBPQ9Y6R7 5405 aaPredicted RBP7.28□□□□□ -1.24
RNF40-209ENST00000566703 BAALC-AS2P0C853 105 aa7.28□□□□□ -1.24
RNF40-209ENST00000566703 LYRM7Q5U5X0 104 aa7.28□□□□□ -1.24
RNF40-209ENST00000566703 A0A1B0GW54 56 aa7.27□□□□□ -1.25
RNF40-209ENST00000566703 A8MWP4 228 aa7.25□□□□□ -1.25
RNF40-209ENST00000566703 C8orf17Q9NRJ1 99 aa7.23□□□□□ -1.25
RNF40-209ENST00000566703 JMJD7-PLA2G4BH0Y9G9 81 aa7.22□□□□□ -1.25
RNF40-209ENST00000566703 KRTAP19-6Q3LI70 58 aa7.22□□□□□ -1.25
RNF40-209ENST00000566703 WFDC13Q8IUB5 93 aa7.21□□□□□ -1.26
RNF40-209ENST00000566703 PRO0461Q9UI25 63 aa7.21□□□□□ -1.26
RNF40-209ENST00000566703 PDE6GP18545 87 aa7.2□□□□□ -1.26
RNF40-209ENST00000566703 LOC110117498A0A087WWA1 95 aa7.19□□□□□ -1.26
RNF40-209ENST00000566703 IGKV3D-7A0A0C4DH55 119 aa7.18□□□□□ -1.26
RNF40-209ENST00000566703 Q6ZVQ6 151 aa7.18□□□□□ -1.26
RNF40-209ENST00000566703 ATXN8Q156A1 80 aa7.16□□□□□ -1.26
RNF40-209ENST00000566703 PRR15Q8IV56 129 aa7.15□□□□□ -1.26
RNF40-209ENST00000566703 NAA38Q9BRA0 125 aaKnown RBP7.15□□□□□ -1.26
RNF40-209ENST00000566703 ETDBQ3ZM63 59 aa7.13□□□□□ -1.27
RNF40-209ENST00000566703 NREPQ16612 68 aa7.11□□□□□ -1.27
RNF40-209ENST00000566703 H1FX-AS1Q4G0G2 97 aa7.11□□□□□ -1.27
RNF40-209ENST00000566703 TMEM254Q8TBM7 123 aa7.11□□□□□ -1.27
RNF40-209ENST00000566703 MRPL34Q9BQ48 92 aaKnown RBP7.11□□□□□ -1.27
RNF40-209ENST00000566703 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
RNF40-209ENST00000566703 C14orf132Q9NPU4 83 aa7.08□□□□□ -1.28
RNF40-209ENST00000566703 SMCPP49901 116 aaPredicted RBP7.07□□□□□ -1.28
RNF40-209ENST00000566703 hDV103S1A0JD37 113 aa7.05□□□□□ -1.28
RNF40-209ENST00000566703 FAM240AA0A1B0GVK7 77 aa7.02□□□□□ -1.29
RNF40-209ENST00000566703 H3BT86 120 aa7.01□□□□□ -1.29
RNF40-209ENST00000566703 NDUFS5O43920 106 aa7.01□□□□□ -1.29
RNF40-209ENST00000566703 K7EQZ3 153 aa7□□□□□ -1.29
RNF40-209ENST00000566703 KRTAP6-3Q3LI67 103 aa7□□□□□ -1.29
RNF40-209ENST00000566703 MACF1Q9UPN3 7388 aaKnown RBP6.99□□□□□ -1.29
RNF40-209ENST00000566703 C7orf65Q6ZTY9 151 aa6.98□□□□□ -1.29
RNF40-209ENST00000566703 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
RNF40-209ENST00000566703 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
RNF40-209ENST00000566703 ACYP1P07311 99 aa6.97□□□□□ -1.29
RNF40-209ENST00000566703 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
RNF40-209ENST00000566703 Q5W150 140 aa6.96□□□□□ -1.3
RNF40-209ENST00000566703 BPY2O14599 106 aa6.95□□□□□ -1.3
RNF40-209ENST00000566703 MT-ATP8P03928 68 aa6.95□□□□□ -1.3
RNF40-209ENST00000566703 IMUPQ9GZP8 106 aa6.95□□□□□ -1.3
RNF40-209ENST00000566703 ANAPC13Q9BS18 74 aa6.93□□□□□ -1.3
RNF40-209ENST00000566703 SYNE2Q8WXH0 6885 aaKnown RBP6.92□□□□□ -1.3
RNF40-209ENST00000566703 CASC2Q6XLA1 102 aa6.89□□□□□ -1.31
RNF40-209ENST00000566703 HCG22E2RYF7 251 aa6.88□□□□□ -1.31
RNF40-209ENST00000566703 C4orf26Q17RF5 130 aa6.88□□□□□ -1.31
RNF40-209ENST00000566703 CXCL6P80162 114 aa6.87□□□□□ -1.31
RNF40-209ENST00000566703 LINC00643Q86TS7 51 aa6.84□□□□□ -1.31
RNF40-209ENST00000566703 Q8N9L7 120 aa6.83□□□□□ -1.32
RNF40-209ENST00000566703 C5orf47Q569G3 176 aa6.82□□□□□ -1.32
RNF40-209ENST00000566703 FAM236AA0A1B0GUQ0 79 aa6.8□□□□□ -1.32
RNF40-209ENST00000566703 FAM236BA0A1B0GV22 79 aa6.8□□□□□ -1.32
RNF40-209ENST00000566703 CSAG1Q6PB30 78 aa6.8□□□□□ -1.32
RNF40-209ENST00000566703 A6NN06 94 aa6.79□□□□□ -1.32
RNF40-209ENST00000566703 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
RNF40-209ENST00000566703 MT1BP07438 61 aa6.77□□□□□ -1.33
RNF40-209ENST00000566703 KRTAP19-8Q3LI54 63 aa6.77□□□□□ -1.33
RNF40-209ENST00000566703 Q5VV11 94 aa6.77□□□□□ -1.33
RNF40-209ENST00000566703 SPRR2GQ9BYE4 73 aa6.77□□□□□ -1.33
RNF40-209ENST00000566703 S4R3F8 94 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms