RNA–Protein interactions for RNA: ENST00000566582.1

LINC01541-201, Transcript of long intergenic non-protein coding RNA 1541, humanhuman

TSL 2

Gene LINC01541, Length 2,414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01541-201ENST00000566582 PRO0628Q9UI54 55 aa5.15□□□□□ -1.58
LINC01541-201ENST00000566582 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
LINC01541-201ENST00000566582 H0Y9P7 68 aa5.14□□□□□ -1.59
LINC01541-201ENST00000566582 NDUFS5O43920 106 aa5.14□□□□□ -1.59
LINC01541-201ENST00000566582 OXTP01178 125 aa5.14□□□□□ -1.59
LINC01541-201ENST00000566582 C4orf26Q17RF5 130 aa5.14□□□□□ -1.59
LINC01541-201ENST00000566582 DNAH5Q8TE73 4624 aa5.14□□□□□ -1.59
LINC01541-201ENST00000566582 PKD1P98161 4303 aa5.13□□□□□ -1.59
LINC01541-201ENST00000566582 DNAH11Q96DT5 4516 aa5.13□□□□□ -1.59
LINC01541-201ENST00000566582 KRTAP13-2Q52LG2 175 aa5.12□□□□□ -1.59
LINC01541-201ENST00000566582 ZCCHC13Q8WW36 166 aaKnown RBP5.12□□□□□ -1.59
LINC01541-201ENST00000566582 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
LINC01541-201ENST00000566582 FAT2Q9NYQ8 4349 aa5.11□□□□□ -1.59
LINC01541-201ENST00000566582 TRAV22A0A0B4J277 110 aa5.11□□□□□ -1.59
LINC01541-201ENST00000566582 LCE2BO14633 110 aa5.1□□□□□ -1.59
LINC01541-201ENST00000566582 C1orf195Q5TG92 126 aa5.1□□□□□ -1.59
LINC01541-201ENST00000566582 C1orf64Q8NEQ6 169 aa5.1□□□□□ -1.59
LINC01541-201ENST00000566582 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
LINC01541-201ENST00000566582 H3BPC8 53 aa5.09□□□□□ -1.59
LINC01541-201ENST00000566582 SMR3BP02814 79 aaPredicted RBP5.09□□□□□ -1.59
LINC01541-201ENST00000566582 KRTAP1-4P0C5Y4 121 aa5.09□□□□□ -1.59
LINC01541-201ENST00000566582 NOTCH2NLQ7Z3S9 236 aa5.09□□□□□ -1.59
LINC01541-201ENST00000566582 MRPL34Q9BQ48 92 aaKnown RBP5.09□□□□□ -1.59
LINC01541-201ENST00000566582 PRR4Q16378 134 aa5.09□□□□□ -1.59
LINC01541-201ENST00000566582 ASB16-AS1Q495Z4 193 aa5.09□□□□□ -1.59
LINC01541-201ENST00000566582 Q75L30 129 aa5.08□□□□□ -1.6
LINC01541-201ENST00000566582 TYMSOSQ8TAI1 123 aa5.08□□□□□ -1.6
LINC01541-201ENST00000566582 LRP1BQ9NZR2 4599 aa5.07□□□□□ -1.6
LINC01541-201ENST00000566582 LIMD2Q9BT23 127 aa5.07□□□□□ -1.6
LINC01541-201ENST00000566582 KRTAP4-8Q9BYQ9 185 aa5.05□□□□□ -1.6
LINC01541-201ENST00000566582 SMIM26A0A096LP01 95 aa5.05□□□□□ -1.6
LINC01541-201ENST00000566582 A0A1B0GVY2 172 aa5.05□□□□□ -1.6
LINC01541-201ENST00000566582 C8orf87E5RJ46 101 aa5.04□□□□□ -1.6
LINC01541-201ENST00000566582 LINC00313P59037 77 aa5.04□□□□□ -1.6
LINC01541-201ENST00000566582 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
LINC01541-201ENST00000566582 Q5XG85 94 aa5.04□□□□□ -1.6
LINC01541-201ENST00000566582 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
LINC01541-201ENST00000566582 VPS13BQ7Z7G8 4022 aa5.02□□□□□ -1.61
LINC01541-201ENST00000566582 SPINK1P00995 79 aa5.02□□□□□ -1.61
LINC01541-201ENST00000566582 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
LINC01541-201ENST00000566582 SACSQ9NZJ4 4579 aa5.01□□□□□ -1.61
LINC01541-201ENST00000566582 SPANXA2-OT1Q8N9U9 137 aa5.01□□□□□ -1.61
LINC01541-201ENST00000566582 FP248Q71RG6 208 aaPredicted RBP5□□□□□ -1.61
LINC01541-201ENST00000566582 LINC00304Q8N9R0 145 aa5□□□□□ -1.61
LINC01541-201ENST00000566582 MPLKIPQ8TAP9 179 aa5□□□□□ -1.61
LINC01541-201ENST00000566582 FAM229AH3BQW9 127 aa4.99□□□□□ -1.61
LINC01541-201ENST00000566582 Q5W150 140 aa4.98□□□□□ -1.61
LINC01541-201ENST00000566582 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
LINC01541-201ENST00000566582 RETNLBQ9BQ08 111 aa4.97□□□□□ -1.61
LINC01541-201ENST00000566582 LOC101927531A0A1B0GV80 90 aa4.97□□□□□ -1.61
LINC01541-201ENST00000566582 SPAG11AQ6PDA7 123 aa4.97□□□□□ -1.61
LINC01541-201ENST00000566582 IGLV7-46A0A075B6I9 117 aa4.96□□□□□ -1.61
LINC01541-201ENST00000566582 Q8N9P0 234 aaPredicted RBP4.95□□□□□ -1.62
LINC01541-201ENST00000566582 KRTAP10-4P60372 401 aaPredicted RBP4.94□□□□□ -1.62
LINC01541-201ENST00000566582 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
LINC01541-201ENST00000566582 PMAIP1Q13794 54 aa4.93□□□□□ -1.62
LINC01541-201ENST00000566582 KRTAP13-3Q3SY46 172 aa4.93□□□□□ -1.62
LINC01541-201ENST00000566582 KRTAP16-1A8MUX0 517 aa4.92□□□□□ -1.62
LINC01541-201ENST00000566582 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
LINC01541-201ENST00000566582 KMT2CQ8NEZ4 4911 aaKnown RBP4.92□□□□□ -1.62
LINC01541-201ENST00000566582 COA5Q86WW8 74 aa4.91□□□□□ -1.62
LINC01541-201ENST00000566582 RYR2Q92736 4967 aa4.89□□□□□ -1.63
LINC01541-201ENST00000566582 Q1T7F1 81 aa4.88□□□□□ -1.63
LINC01541-201ENST00000566582 IGKV2D-30A0A075B6S6 120 aa4.87□□□□□ -1.63
LINC01541-201ENST00000566582 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
LINC01541-201ENST00000566582 FAT1Q14517 4588 aa4.87□□□□□ -1.63
LINC01541-201ENST00000566582 C9orf92A6NGG3 77 aa4.87□□□□□ -1.63
LINC01541-201ENST00000566582 PSPHP1O15172 72 aa4.86□□□□□ -1.63
LINC01541-201ENST00000566582 HRES1P13985 223 aa4.86□□□□□ -1.63
LINC01541-201ENST00000566582 Q5VSD8 79 aa4.86□□□□□ -1.63
LINC01541-201ENST00000566582 APOBP04114 4563 aaKnown RBP4.86□□□□□ -1.63
LINC01541-201ENST00000566582 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
LINC01541-201ENST00000566582 KRTAP17-1Q9BYP8 105 aa4.85□□□□□ -1.63
LINC01541-201ENST00000566582 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.84□□□□□ -1.63
LINC01541-201ENST00000566582 ACYP2P14621 99 aa4.84□□□□□ -1.64
LINC01541-201ENST00000566582 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
LINC01541-201ENST00000566582 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
LINC01541-201ENST00000566582 BRK1Q8WUW1 75 aa4.83□□□□□ -1.64
LINC01541-201ENST00000566582 A8MUN3 132 aa4.82□□□□□ -1.64
LINC01541-201ENST00000566582 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
LINC01541-201ENST00000566582 Q8N1X5 172 aa4.81□□□□□ -1.64
LINC01541-201ENST00000566582 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
LINC01541-201ENST00000566582 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
LINC01541-201ENST00000566582 C7orf65Q6ZTY9 151 aa4.8□□□□□ -1.64
LINC01541-201ENST00000566582 C20orf166-AS1Q96NR2 134 aa4.77□□□□□ -1.65
LINC01541-201ENST00000566582 A8MUU9 505 aa4.77□□□□□ -1.65
LINC01541-201ENST00000566582 KRTAP10-8P60410 259 aa4.77□□□□□ -1.65
LINC01541-201ENST00000566582 FLG2Q5D862 2391 aaPredicted RBP4.77□□□□□ -1.65
LINC01541-201ENST00000566582 Q5VV11 94 aa4.76□□□□□ -1.65
LINC01541-201ENST00000566582 KRTAP4-7Q9BYR0 210 aa4.76□□□□□ -1.65
LINC01541-201ENST00000566582 RYR3Q15413 4870 aa4.75□□□□□ -1.65
LINC01541-201ENST00000566582 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
LINC01541-201ENST00000566582 LCE3BQ5TA77 95 aa4.74□□□□□ -1.65
LINC01541-201ENST00000566582 RBM12B-AS1Q9P1G2 102 aa4.74□□□□□ -1.65
LINC01541-201ENST00000566582 LINC01558Q9Y6Z2 57 aa4.74□□□□□ -1.65
LINC01541-201ENST00000566582 PKHD1L1Q86WI1 4243 aa4.73□□□□□ -1.65
LINC01541-201ENST00000566582 DMBT1Q9UGM3 2413 aaPredicted RBP4.71□□□□□ -1.65
LINC01541-201ENST00000566582 HSPG2P98160 4391 aa4.71□□□□□ -1.65
LINC01541-201ENST00000566582 LRP1Q07954 4544 aaKnown RBP4.71□□□□□ -1.66
LINC01541-201ENST00000566582 KRTAP9-8Q9BYQ0 159 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms