RNA–Protein interactions for RNA: ENST00000566561.1

KLHDC4-216, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-216ENST00000566561 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
KLHDC4-216ENST00000566561 A0A1B0GV72 72 aa6.5□□□□□ -1.37
KLHDC4-216ENST00000566561 A0A1W2PNM2 257 aa6.49□□□□□ -1.37
KLHDC4-216ENST00000566561 M0R2T5 61 aa6.49□□□□□ -1.37
KLHDC4-216ENST00000566561 LOC110117498A0A087WWA1 95 aa6.48□□□□□ -1.37
KLHDC4-216ENST00000566561 RBM3P98179 157 aaKnown RBP6.48□□□□□ -1.37
KLHDC4-216ENST00000566561 C14orf132Q9NPU4 83 aa6.48□□□□□ -1.37
KLHDC4-216ENST00000566561 TRBV7-4A0A0J9YYF1 115 aa6.47□□□□□ -1.37
KLHDC4-216ENST00000566561 FAM240AA0A1B0GVK7 77 aa6.47□□□□□ -1.37
KLHDC4-216ENST00000566561 SIGMAR1Q99720 223 aa6.47□□□□□ -1.37
KLHDC4-216ENST00000566561 CCKP06307 115 aa6.46□□□□□ -1.38
KLHDC4-216ENST00000566561 PDE6GP18545 87 aa6.46□□□□□ -1.38
KLHDC4-216ENST00000566561 ACYP1P07311 99 aa6.45□□□□□ -1.38
KLHDC4-216ENST00000566561 DSCR10P59022 87 aa6.45□□□□□ -1.38
KLHDC4-216ENST00000566561 Q6ZQT0 140 aa6.45□□□□□ -1.38
KLHDC4-216ENST00000566561 C20orf166-AS1Q96NR2 134 aa6.45□□□□□ -1.38
KLHDC4-216ENST00000566561 KRTAP9-7A8MTY7 169 aa6.44□□□□□ -1.38
KLHDC4-216ENST00000566561 IGKV4-1P06312 121 aa6.44□□□□□ -1.38
KLHDC4-216ENST00000566561 A8MUU9 505 aa6.43□□□□□ -1.38
KLHDC4-216ENST00000566561 DSCR8Q96T75 97 aa6.43□□□□□ -1.38
KLHDC4-216ENST00000566561 C21orf62-AS1Q17RA5 79 aa6.42□□□□□ -1.38
KLHDC4-216ENST00000566561 LINC00313P59037 77 aa6.41□□□□□ -1.38
KLHDC4-216ENST00000566561 DEFB116Q30KQ4 102 aa6.41□□□□□ -1.38
KLHDC4-216ENST00000566561 FLGP20930 4061 aaPredicted RBP6.41□□□□□ -1.38
KLHDC4-216ENST00000566561 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.4□□□□□ -1.38
KLHDC4-216ENST00000566561 VPS25Q9BRG1 176 aa6.4□□□□□ -1.38
KLHDC4-216ENST00000566561 LINC00846Q9NV44 126 aa6.38□□□□□ -1.39
KLHDC4-216ENST00000566561 A0A1B0GW54 56 aa6.37□□□□□ -1.39
KLHDC4-216ENST00000566561 LINC00472Q9H8W2 130 aa6.37□□□□□ -1.39
KLHDC4-216ENST00000566561 IGHV6-1A0A0B4J1U7 121 aa6.36□□□□□ -1.39
KLHDC4-216ENST00000566561 KRTAP16-1A8MUX0 517 aa6.34□□□□□ -1.39
KLHDC4-216ENST00000566561 NOTCH2NLQ7Z3S9 236 aa6.34□□□□□ -1.39
KLHDC4-216ENST00000566561 LINC00643Q86TS7 51 aa6.33□□□□□ -1.4
KLHDC4-216ENST00000566561 MT-ATP8P03928 68 aa6.31□□□□□ -1.4
KLHDC4-216ENST00000566561 A0A1B0GVX0 72 aa6.3□□□□□ -1.4
KLHDC4-216ENST00000566561 C8orf87E5RJ46 101 aa6.3□□□□□ -1.4
KLHDC4-216ENST00000566561 SSPOA2VEC9 5147 aa6.3□□□□□ -1.4
KLHDC4-216ENST00000566561 FAM236DA0A1B0GTK5 79 aa6.29□□□□□ -1.4
KLHDC4-216ENST00000566561 FAM236CP0DP71 79 aa6.29□□□□□ -1.4
KLHDC4-216ENST00000566561 Q6ZVQ6 151 aa6.29□□□□□ -1.4
KLHDC4-216ENST00000566561 UBL5Q9BZL1 73 aa6.29□□□□□ -1.4
KLHDC4-216ENST00000566561 J3KT08 172 aa6.28□□□□□ -1.4
KLHDC4-216ENST00000566561 USH2AO75445 5202 aa6.28□□□□□ -1.4
KLHDC4-216ENST00000566561 IMUPQ9GZP8 106 aa6.27□□□□□ -1.41
KLHDC4-216ENST00000566561 NDUFB1O75438 58 aa6.25□□□□□ -1.41
KLHDC4-216ENST00000566561 NREPQ16612 68 aa6.25□□□□□ -1.41
KLHDC4-216ENST00000566561 RBM12B-AS1Q9P1G2 102 aa6.25□□□□□ -1.41
KLHDC4-216ENST00000566561 ATP5EP2Q5VTU8 51 aa6.24□□□□□ -1.41
KLHDC4-216ENST00000566561 HRES1P13985 223 aa6.23□□□□□ -1.41
KLHDC4-216ENST00000566561 CXCL6P80162 114 aa6.23□□□□□ -1.41
KLHDC4-216ENST00000566561 IGKV3D-7A0A0C4DH55 119 aa6.21□□□□□ -1.42
KLHDC4-216ENST00000566561 ZCCHC13Q8WW36 166 aaKnown RBP6.21□□□□□ -1.42
KLHDC4-216ENST00000566561 SCGB1A1P11684 91 aa6.2□□□□□ -1.42
KLHDC4-216ENST00000566561 MPLKIPQ8TAP9 179 aa6.2□□□□□ -1.42
KLHDC4-216ENST00000566561 FCGBPQ9Y6R7 5405 aaPredicted RBP6.2□□□□□ -1.42
KLHDC4-216ENST00000566561 A8MWP4 228 aa6.19□□□□□ -1.42
KLHDC4-216ENST00000566561 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
KLHDC4-216ENST00000566561 KRTAP9-8Q9BYQ0 159 aa6.18□□□□□ -1.42
KLHDC4-216ENST00000566561 BPY2O14599 106 aa6.17□□□□□ -1.42
KLHDC4-216ENST00000566561 Q8N9P0 234 aaPredicted RBP6.17□□□□□ -1.42
KLHDC4-216ENST00000566561 SPINK7P58062 85 aa6.16□□□□□ -1.42
KLHDC4-216ENST00000566561 HIST1H4AP62805 103 aaKnown RBP6.14□□□□□ -1.43
KLHDC4-216ENST00000566561 PRR15Q8IV56 129 aa6.13□□□□□ -1.43
KLHDC4-216ENST00000566561 A0A087WVE0 104 aa6.12□□□□□ -1.43
KLHDC4-216ENST00000566561 MT2AP02795 61 aa6.1□□□□□ -1.43
KLHDC4-216ENST00000566561 WFDC13Q8IUB5 93 aa6.09□□□□□ -1.43
KLHDC4-216ENST00000566561 KRTAP19-1Q8IUB9 90 aa6.09□□□□□ -1.43
KLHDC4-216ENST00000566561 Q8N9L7 120 aa6.09□□□□□ -1.43
KLHDC4-216ENST00000566561 MMP24-AS1A0A0U1RRL7 71 aa6.08□□□□□ -1.44
KLHDC4-216ENST00000566561 FAM236AA0A1B0GUQ0 79 aa6.08□□□□□ -1.44
KLHDC4-216ENST00000566561 FAM236BA0A1B0GV22 79 aa6.08□□□□□ -1.44
KLHDC4-216ENST00000566561 K7EQZ3 153 aa6.08□□□□□ -1.44
KLHDC4-216ENST00000566561 TMEM254Q8TBM7 123 aa6.08□□□□□ -1.44
KLHDC4-216ENST00000566561 MRPL34Q9BQ48 92 aaKnown RBP6.08□□□□□ -1.44
KLHDC4-216ENST00000566561 NDUFS5O43920 106 aa6.07□□□□□ -1.44
KLHDC4-216ENST00000566561 KRTAP10-10P60014 251 aa6.07□□□□□ -1.44
KLHDC4-216ENST00000566561 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
KLHDC4-216ENST00000566561 MT1FP04733 61 aa6.05□□□□□ -1.44
KLHDC4-216ENST00000566561 PCP4P48539 62 aa6.03□□□□□ -1.44
KLHDC4-216ENST00000566561 ATOX1O00244 68 aa6.02□□□□□ -1.45
KLHDC4-216ENST00000566561 SYNE2Q8WXH0 6885 aaKnown RBP6.01□□□□□ -1.45
KLHDC4-216ENST00000566561 HCG22E2RYF7 251 aa6.01□□□□□ -1.45
KLHDC4-216ENST00000566561 LCE2BO14633 110 aa6.01□□□□□ -1.45
KLHDC4-216ENST00000566561 MACF1Q9UPN3 7388 aaKnown RBP5.99□□□□□ -1.45
KLHDC4-216ENST00000566561 ANAPC13Q9BS18 74 aa5.99□□□□□ -1.45
KLHDC4-216ENST00000566561 SMIM20Q8N5G0 67 aa5.98□□□□□ -1.45
KLHDC4-216ENST00000566561 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
KLHDC4-216ENST00000566561 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
KLHDC4-216ENST00000566561 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
KLHDC4-216ENST00000566561 CASC2Q6XLA1 102 aa5.97□□□□□ -1.45
KLHDC4-216ENST00000566561 SERP2Q8N6R1 65 aa5.97□□□□□ -1.45
KLHDC4-216ENST00000566561 OCR1Q9BZK8 76 aa5.97□□□□□ -1.45
KLHDC4-216ENST00000566561 TRAV7A0A075B6U4 112 aa5.95□□□□□ -1.46
KLHDC4-216ENST00000566561 H1FX-AS1Q4G0G2 97 aa5.95□□□□□ -1.46
KLHDC4-216ENST00000566561 COX7CP15954 63 aa5.94□□□□□ -1.46
KLHDC4-216ENST00000566561 Q5W150 140 aa5.94□□□□□ -1.46
KLHDC4-216ENST00000566561 C7orf65Q6ZTY9 151 aa5.94□□□□□ -1.46
KLHDC4-216ENST00000566561 UQCRQO14949 82 aa5.92□□□□□ -1.46
KLHDC4-216ENST00000566561 CCDC179H3BU77 68 aa5.89□□□□□ -1.47
KLHDC4-216ENST00000566561 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms