RNA–Protein interactions for RNA: ENST00000566370.1

LINC00563-201, long intergenic non-protein coding RNA 563, humanhuman

BASIC

Gene LINC00563, Length 1,400 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00563-201ENST00000566370 TGP01266 2768 aa7.86□□□□□ -1.15
LINC00563-201ENST00000566370 SRRM2Q9UQ35 2752 aaKnown RBP7.84□□□□□ -1.15
LINC00563-201ENST00000566370 DNAH2Q9P225 4427 aa7.83□□□□□ -1.16
LINC00563-201ENST00000566370 HECTD4Q9Y4D8 3996 aa7.81□□□□□ -1.16
LINC00563-201ENST00000566370 DNHD1Q96M86 4753 aa7.81□□□□□ -1.16
LINC00563-201ENST00000566370 A0A087X002 238 aa7.8□□□□□ -1.16
LINC00563-201ENST00000566370 LORP23490 312 aaPredicted RBP7.8□□□□□ -1.16
LINC00563-201ENST00000566370 PLA2G1BP04054 148 aaKnown RBP7.79□□□□□ -1.16
LINC00563-201ENST00000566370 KRTAP13-2Q52LG2 175 aa7.79□□□□□ -1.16
LINC00563-201ENST00000566370 TYMSOSQ8TAI1 123 aa7.79□□□□□ -1.16
LINC00563-201ENST00000566370 LOC101927531A0A1B0GV80 90 aa7.78□□□□□ -1.16
LINC00563-201ENST00000566370 LINC00313P59037 77 aa7.78□□□□□ -1.16
LINC00563-201ENST00000566370 SPINK1P00995 79 aa7.77□□□□□ -1.17
LINC00563-201ENST00000566370 KRTAP1-4P0C5Y4 121 aa7.76□□□□□ -1.17
LINC00563-201ENST00000566370 KMT2AQ03164 3969 aa7.75□□□□□ -1.17
LINC00563-201ENST00000566370 PRR4Q16378 134 aa7.75□□□□□ -1.17
LINC00563-201ENST00000566370 C4orf26Q17RF5 130 aa7.75□□□□□ -1.17
LINC00563-201ENST00000566370 C1orf195Q5TG92 126 aa7.75□□□□□ -1.17
LINC00563-201ENST00000566370 SPAG11AQ6PDA7 123 aa7.75□□□□□ -1.17
LINC00563-201ENST00000566370 FP248Q71RG6 208 aaPredicted RBP7.74□□□□□ -1.17
LINC00563-201ENST00000566370 V9GYY9 64 aa7.74□□□□□ -1.17
LINC00563-201ENST00000566370 IGLV7-46A0A075B6I9 117 aa7.73□□□□□ -1.17
LINC00563-201ENST00000566370 FAM229AH3BQW9 127 aa7.73□□□□□ -1.17
LINC00563-201ENST00000566370 RPS29P62273 56 aaKnown RBP7.73□□□□□ -1.17
LINC00563-201ENST00000566370 SVIPQ8NHG7 77 aa7.73□□□□□ -1.17
LINC00563-201ENST00000566370 DNAH8Q96JB1 4490 aa7.71□□□□□ -1.17
LINC00563-201ENST00000566370 NOTCH2NLQ7Z3S9 236 aa7.71□□□□□ -1.17
LINC00563-201ENST00000566370 PCOTHQ58A44 107 aa7.7□□□□□ -1.18
LINC00563-201ENST00000566370 MPLKIPQ8TAP9 179 aa7.7□□□□□ -1.18
LINC00563-201ENST00000566370 LINC00304Q8N9R0 145 aa7.69□□□□□ -1.18
LINC00563-201ENST00000566370 A0A1B0GVY2 172 aa7.68□□□□□ -1.18
LINC00563-201ENST00000566370 Q1T7F1 81 aa7.67□□□□□ -1.18
LINC00563-201ENST00000566370 Q8N9P0 234 aaPredicted RBP7.66□□□□□ -1.18
LINC00563-201ENST00000566370 FRAS1Q86XX4 4008 aa7.65□□□□□ -1.19
LINC00563-201ENST00000566370 DNAH11Q96DT5 4516 aa7.64□□□□□ -1.19
LINC00563-201ENST00000566370 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
LINC00563-201ENST00000566370 COA5Q86WW8 74 aa7.62□□□□□ -1.19
LINC00563-201ENST00000566370 PRR26Q8N8Z3 221 aa7.62□□□□□ -1.19
LINC00563-201ENST00000566370 SMR3BP02814 79 aaPredicted RBP7.61□□□□□ -1.19
LINC00563-201ENST00000566370 KRTAP13-3Q3SY46 172 aa7.61□□□□□ -1.19
LINC00563-201ENST00000566370 PKD1P98161 4303 aa7.6□□□□□ -1.19
LINC00563-201ENST00000566370 Q5W150 140 aa7.6□□□□□ -1.19
LINC00563-201ENST00000566370 KRTAP16-1A8MUX0 517 aa7.57□□□□□ -1.2
LINC00563-201ENST00000566370 FAT2Q9NYQ8 4349 aa7.57□□□□□ -1.2
LINC00563-201ENST00000566370 IGKV2-30P06310 120 aa7.56□□□□□ -1.2
LINC00563-201ENST00000566370 ACYP2P14621 99 aa7.56□□□□□ -1.2
LINC00563-201ENST00000566370 PRO0628Q9UI54 55 aa7.54□□□□□ -1.2
LINC00563-201ENST00000566370 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
LINC00563-201ENST00000566370 RETNLBQ9BQ08 111 aa7.52□□□□□ -1.21
LINC00563-201ENST00000566370 CHKB-CPT1BH3BT56 60 aa7.5□□□□□ -1.21
LINC00563-201ENST00000566370 HRES1P13985 223 aa7.5□□□□□ -1.21
LINC00563-201ENST00000566370 HYDINQ4G0P3 5121 aa7.49□□□□□ -1.21
LINC00563-201ENST00000566370 PSPHP1O15172 72 aa7.49□□□□□ -1.21
LINC00563-201ENST00000566370 LRP1BQ9NZR2 4599 aa7.48□□□□□ -1.21
LINC00563-201ENST00000566370 KRTAP10-4P60372 401 aaPredicted RBP7.48□□□□□ -1.21
LINC00563-201ENST00000566370 DMAC1Q96GE9 116 aa7.48□□□□□ -1.21
LINC00563-201ENST00000566370 IGKV2D-30A0A075B6S6 120 aa7.47□□□□□ -1.21
LINC00563-201ENST00000566370 PRR15LQ9BU68 103 aa7.47□□□□□ -1.21
LINC00563-201ENST00000566370 C7orf65Q6ZTY9 151 aa7.46□□□□□ -1.21
LINC00563-201ENST00000566370 A8MUN3 132 aa7.45□□□□□ -1.22
LINC00563-201ENST00000566370 LINC01558Q9Y6Z2 57 aa7.44□□□□□ -1.22
LINC00563-201ENST00000566370 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
LINC00563-201ENST00000566370 Q5VV11 94 aa7.4□□□□□ -1.22
LINC00563-201ENST00000566370 Q75L30 129 aa7.4□□□□□ -1.22
LINC00563-201ENST00000566370 A8MUU9 505 aa7.38□□□□□ -1.23
LINC00563-201ENST00000566370 C20orf166-AS1Q96NR2 134 aa7.38□□□□□ -1.23
LINC00563-201ENST00000566370 Q5VSD8 79 aa7.37□□□□□ -1.23
LINC00563-201ENST00000566370 C9orf92A6NGG3 77 aa7.36□□□□□ -1.23
LINC00563-201ENST00000566370 VPS13BQ7Z7G8 4022 aa7.36□□□□□ -1.23
LINC00563-201ENST00000566370 DYNC1H1Q14204 4646 aaKnown RBP7.35□□□□□ -1.23
LINC00563-201ENST00000566370 A6NED7 52 aa7.34□□□□□ -1.23
LINC00563-201ENST00000566370 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
LINC00563-201ENST00000566370 KRTAP10-8P60410 259 aa7.29□□□□□ -1.24
LINC00563-201ENST00000566370 PKHD1P08F94 4074 aa7.28□□□□□ -1.24
LINC00563-201ENST00000566370 A0A1B0GU69 56 aa7.27□□□□□ -1.25
LINC00563-201ENST00000566370 RYR2Q92736 4967 aa7.26□□□□□ -1.25
LINC00563-201ENST00000566370 Q8N1X5 172 aa7.26□□□□□ -1.25
LINC00563-201ENST00000566370 APOBP04114 4563 aaKnown RBP7.25□□□□□ -1.25
LINC00563-201ENST00000566370 ATP11AUNQ6ZP68 121 aa7.24□□□□□ -1.25
LINC00563-201ENST00000566370 CDC42SE1Q9NRR8 79 aa7.24□□□□□ -1.25
LINC00563-201ENST00000566370 SEC61GP60059 68 aa7.21□□□□□ -1.25
LINC00563-201ENST00000566370 SPINK7P58062 85 aa7.2□□□□□ -1.26
LINC00563-201ENST00000566370 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
LINC00563-201ENST00000566370 FLG2Q5D862 2391 aaPredicted RBP7.16□□□□□ -1.26
LINC00563-201ENST00000566370 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
LINC00563-201ENST00000566370 LCA10Q71F78 164 aa7.13□□□□□ -1.27
LINC00563-201ENST00000566370 UQCR11O14957 56 aa7.12□□□□□ -1.27
LINC00563-201ENST00000566370 PMAIP1Q13794 54 aa7.12□□□□□ -1.27
LINC00563-201ENST00000566370 COX6B2Q6YFQ2 88 aa7.12□□□□□ -1.27
LINC00563-201ENST00000566370 FAT1Q14517 4588 aa7.11□□□□□ -1.27
LINC00563-201ENST00000566370 XP32Q5T750 250 aa7.07□□□□□ -1.28
LINC00563-201ENST00000566370 MIR22HGQ0VDD5 57 aa7.04□□□□□ -1.28
LINC00563-201ENST00000566370 KMT2CQ8NEZ4 4911 aaKnown RBP7.04□□□□□ -1.28
LINC00563-201ENST00000566370 MT1HL1P0DM35 61 aa7.03□□□□□ -1.28
LINC00563-201ENST00000566370 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
LINC00563-201ENST00000566370 A8MU10 97 aa7.02□□□□□ -1.29
LINC00563-201ENST00000566370 KRTAP3-1Q9BYR8 98 aa7□□□□□ -1.29
LINC00563-201ENST00000566370 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
LINC00563-201ENST00000566370 HSPG2P98160 4391 aa6.96□□□□□ -1.3
LINC00563-201ENST00000566370 A6NN06 94 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms