RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 APOBP04114 4563 aaKnown RBP5.19□□□□□ -1.58
LSM3P5-201ENST00000566307 SRRM2Q9UQ35 2752 aaKnown RBP5.18□□□□□ -1.58
LSM3P5-201ENST00000566307 PKHD1P08F94 4074 aa5.18□□□□□ -1.58
LSM3P5-201ENST00000566307 RPS29P62273 56 aaKnown RBP5.18□□□□□ -1.58
LSM3P5-201ENST00000566307 SERP2Q8N6R1 65 aa5.18□□□□□ -1.58
LSM3P5-201ENST00000566307 K7EQZ3 153 aa5.17□□□□□ -1.58
LSM3P5-201ENST00000566307 UQCRQO14949 82 aa5.17□□□□□ -1.58
LSM3P5-201ENST00000566307 COX7CP15954 63 aa5.17□□□□□ -1.58
LSM3P5-201ENST00000566307 PRR15Q8IV56 129 aa5.17□□□□□ -1.58
LSM3P5-201ENST00000566307 KRTAP9-3Q9BYQ3 159 aa5.17□□□□□ -1.58
LSM3P5-201ENST00000566307 Q8N9L7 120 aa5.16□□□□□ -1.58
LSM3P5-201ENST00000566307 VPS13BQ7Z7G8 4022 aa5.15□□□□□ -1.58
LSM3P5-201ENST00000566307 TRAV7A0A075B6U4 112 aa5.15□□□□□ -1.59
LSM3P5-201ENST00000566307 HCG22E2RYF7 251 aa5.15□□□□□ -1.59
LSM3P5-201ENST00000566307 NDUFB1O75438 58 aa5.15□□□□□ -1.59
LSM3P5-201ENST00000566307 SMR3BP02814 79 aaPredicted RBP5.15□□□□□ -1.59
LSM3P5-201ENST00000566307 LIMD2Q9BT23 127 aa5.15□□□□□ -1.59
LSM3P5-201ENST00000566307 SPINK1P00995 79 aa5.14□□□□□ -1.59
LSM3P5-201ENST00000566307 SPAG11AQ6PDA7 123 aa5.14□□□□□ -1.59
LSM3P5-201ENST00000566307 TYMSOSQ8TAI1 123 aa5.14□□□□□ -1.59
LSM3P5-201ENST00000566307 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
LSM3P5-201ENST00000566307 RYR3Q15413 4870 aa5.14□□□□□ -1.59
LSM3P5-201ENST00000566307 KRTAP29-1A8MX34 341 aaPredicted RBP5.13□□□□□ -1.59
LSM3P5-201ENST00000566307 HRCT1Q6UXD1 115 aa5.13□□□□□ -1.59
LSM3P5-201ENST00000566307 DEFB116Q30KQ4 102 aa5.12□□□□□ -1.59
LSM3P5-201ENST00000566307 OCR1Q9BZK8 76 aa5.12□□□□□ -1.59
LSM3P5-201ENST00000566307 A0A1B0GVX0 72 aa5.11□□□□□ -1.59
LSM3P5-201ENST00000566307 RYR1P21817 5038 aa5.11□□□□□ -1.59
LSM3P5-201ENST00000566307 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
LSM3P5-201ENST00000566307 CCDC179H3BU77 68 aa5.1□□□□□ -1.59
LSM3P5-201ENST00000566307 C8orf87E5RJ46 101 aa5.09□□□□□ -1.59
LSM3P5-201ENST00000566307 C1orf195Q5TG92 126 aa5.09□□□□□ -1.59
LSM3P5-201ENST00000566307 PRR26Q8N8Z3 221 aa5.09□□□□□ -1.59
LSM3P5-201ENST00000566307 LINC00304Q8N9R0 145 aa5.09□□□□□ -1.59
LSM3P5-201ENST00000566307 C8orf17Q9NRJ1 99 aa5.09□□□□□ -1.59
LSM3P5-201ENST00000566307 Q5VSD8 79 aa5.08□□□□□ -1.6
LSM3P5-201ENST00000566307 CASC2Q6XLA1 102 aa5.08□□□□□ -1.6
LSM3P5-201ENST00000566307 KLKP1Q107X0 134 aa5.07□□□□□ -1.6
LSM3P5-201ENST00000566307 FAT1Q14517 4588 aa5.07□□□□□ -1.6
LSM3P5-201ENST00000566307 PKHD1L1Q86WI1 4243 aa5.06□□□□□ -1.6
LSM3P5-201ENST00000566307 hDV103S1A0JD37 113 aa5.06□□□□□ -1.6
LSM3P5-201ENST00000566307 WFDC13Q8IUB5 93 aa5.06□□□□□ -1.6
LSM3P5-201ENST00000566307 TMEM254Q8TBM7 123 aa5.06□□□□□ -1.6
LSM3P5-201ENST00000566307 KRTAP17-1Q9BYP8 105 aa5.06□□□□□ -1.6
LSM3P5-201ENST00000566307 C5orf47Q569G3 176 aa5.05□□□□□ -1.6
LSM3P5-201ENST00000566307 Q8N1X5 172 aa5.05□□□□□ -1.6
LSM3P5-201ENST00000566307 TP53AIP1Q9HCN2 124 aa5.05□□□□□ -1.6
LSM3P5-201ENST00000566307 IGHV6-1A0A0B4J1U7 121 aa5.03□□□□□ -1.6
LSM3P5-201ENST00000566307 H3BPC8 53 aa5.03□□□□□ -1.6
LSM3P5-201ENST00000566307 KRTAP10-8P60410 259 aa5.03□□□□□ -1.6
LSM3P5-201ENST00000566307 MRPL34Q9BQ48 92 aaKnown RBP5.03□□□□□ -1.6
LSM3P5-201ENST00000566307 HSPG2P98160 4391 aa5.02□□□□□ -1.61
LSM3P5-201ENST00000566307 A0A0U1RQV1 116 aa5.02□□□□□ -1.61
LSM3P5-201ENST00000566307 NDUFC1O43677 76 aa5.02□□□□□ -1.61
LSM3P5-201ENST00000566307 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
LSM3P5-201ENST00000566307 LINC00313P59037 77 aa5□□□□□ -1.61
LSM3P5-201ENST00000566307 ZCCHC13Q8WW36 166 aaKnown RBP5□□□□□ -1.61
LSM3P5-201ENST00000566307 TMEM258P61165 79 aa4.99□□□□□ -1.61
LSM3P5-201ENST00000566307 NOTCH2NLQ7Z3S9 236 aa4.99□□□□□ -1.61
LSM3P5-201ENST00000566307 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
LSM3P5-201ENST00000566307 KIAA1109Q2LD37 5005 aa4.98□□□□□ -1.61
LSM3P5-201ENST00000566307 MP68P56378 58 aa4.98□□□□□ -1.61
LSM3P5-201ENST00000566307 TRAV22A0A0B4J277 110 aa4.97□□□□□ -1.61
LSM3P5-201ENST00000566307 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
LSM3P5-201ENST00000566307 FLG2Q5D862 2391 aaPredicted RBP4.96□□□□□ -1.62
LSM3P5-201ENST00000566307 H7BZZ5 65 aa4.96□□□□□ -1.62
LSM3P5-201ENST00000566307 OXTP01178 125 aa4.96□□□□□ -1.62
LSM3P5-201ENST00000566307 CYSTM1Q9H1C7 97 aa4.96□□□□□ -1.62
LSM3P5-201ENST00000566307 EPPK1P58107 5090 aaKnown RBP4.94□□□□□ -1.62
LSM3P5-201ENST00000566307 H0Y9P7 68 aa4.94□□□□□ -1.62
LSM3P5-201ENST00000566307 FP248Q71RG6 208 aaPredicted RBP4.94□□□□□ -1.62
LSM3P5-201ENST00000566307 SNURFQ9Y675 71 aa4.94□□□□□ -1.62
LSM3P5-201ENST00000566307 ATP5EP56381 51 aaPredicted RBP4.93□□□□□ -1.62
LSM3P5-201ENST00000566307 KRTAP13-3Q3SY46 172 aa4.93□□□□□ -1.62
LSM3P5-201ENST00000566307 MT1HL1P0DM35 61 aa4.92□□□□□ -1.62
LSM3P5-201ENST00000566307 NDUFS5O43920 106 aa4.91□□□□□ -1.62
LSM3P5-201ENST00000566307 LOC101927531A0A1B0GV80 90 aa4.9□□□□□ -1.63
LSM3P5-201ENST00000566307 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.63
LSM3P5-201ENST00000566307 LINC00208Q96KT6 92 aa4.9□□□□□ -1.63
LSM3P5-201ENST00000566307 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
LSM3P5-201ENST00000566307 BIRC6Q9NR09 4857 aa4.89□□□□□ -1.63
LSM3P5-201ENST00000566307 FAM236DA0A1B0GTK5 79 aa4.89□□□□□ -1.63
LSM3P5-201ENST00000566307 FAM236CP0DP71 79 aa4.89□□□□□ -1.63
LSM3P5-201ENST00000566307 C1orf64Q8NEQ6 169 aa4.89□□□□□ -1.63
LSM3P5-201ENST00000566307 C20orf166-AS1Q96NR2 134 aa4.89□□□□□ -1.63
LSM3P5-201ENST00000566307 TNXBP22105 4242 aa4.89□□□□□ -1.63
LSM3P5-201ENST00000566307 A8MUU9 505 aa4.88□□□□□ -1.63
LSM3P5-201ENST00000566307 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
LSM3P5-201ENST00000566307 SPANXA2-OT1Q8N9U9 137 aa4.88□□□□□ -1.63
LSM3P5-201ENST00000566307 Q5W150 140 aa4.87□□□□□ -1.63
LSM3P5-201ENST00000566307 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
LSM3P5-201ENST00000566307 SEC61BP60468 96 aaKnown RBP4.85□□□□□ -1.63
LSM3P5-201ENST00000566307 CYP4F30PQ9H0H9 118 aa4.85□□□□□ -1.63
LSM3P5-201ENST00000566307 DMBT1Q9UGM3 2413 aaPredicted RBP4.85□□□□□ -1.63
LSM3P5-201ENST00000566307 IGKV2-30P06310 120 aa4.83□□□□□ -1.64
LSM3P5-201ENST00000566307 Q75L30 129 aa4.83□□□□□ -1.64
LSM3P5-201ENST00000566307 MPLKIPQ8TAP9 179 aa4.83□□□□□ -1.64
LSM3P5-201ENST00000566307 RETNLBQ9BQ08 111 aa4.83□□□□□ -1.64
LSM3P5-201ENST00000566307 SERP1Q9Y6X1 66 aa4.83□□□□□ -1.64
LSM3P5-201ENST00000566307 HERC2O95714 4834 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms