RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 ANAPC13Q9BS18 74 aa5.66□□□□□ -1.5
SF3B3-207ENST00000566095 FLG2Q5D862 2391 aaPredicted RBP5.66□□□□□ -1.5
SF3B3-207ENST00000566095 SERP2Q8N6R1 65 aa5.64□□□□□ -1.51
SF3B3-207ENST00000566095 KRTAP4-5Q9BYR2 181 aa5.64□□□□□ -1.51
SF3B3-207ENST00000566095 HCG22E2RYF7 251 aa5.63□□□□□ -1.51
SF3B3-207ENST00000566095 FP248Q71RG6 208 aaPredicted RBP5.63□□□□□ -1.51
SF3B3-207ENST00000566095 TRAV7A0A075B6U4 112 aa5.62□□□□□ -1.51
SF3B3-207ENST00000566095 A0A087WVE0 104 aa5.62□□□□□ -1.51
SF3B3-207ENST00000566095 C8orf87E5RJ46 101 aa5.62□□□□□ -1.51
SF3B3-207ENST00000566095 UQCRQO14949 82 aa5.62□□□□□ -1.51
SF3B3-207ENST00000566095 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
SF3B3-207ENST00000566095 K7EQZ3 153 aa5.61□□□□□ -1.51
SF3B3-207ENST00000566095 COX7CP15954 63 aa5.61□□□□□ -1.51
SF3B3-207ENST00000566095 C1orf195Q5TG92 126 aa5.61□□□□□ -1.51
SF3B3-207ENST00000566095 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
SF3B3-207ENST00000566095 TP53AIP1Q9HCN2 124 aa5.58□□□□□ -1.52
SF3B3-207ENST00000566095 OCR1Q9BZK8 76 aa5.57□□□□□ -1.52
SF3B3-207ENST00000566095 FAT3Q8TDW7 4589 aa5.57□□□□□ -1.52
SF3B3-207ENST00000566095 DEFB116Q30KQ4 102 aa5.56□□□□□ -1.52
SF3B3-207ENST00000566095 C5orf47Q569G3 176 aa5.56□□□□□ -1.52
SF3B3-207ENST00000566095 CASC2Q6XLA1 102 aa5.56□□□□□ -1.52
SF3B3-207ENST00000566095 Q8N9L7 120 aa5.56□□□□□ -1.52
SF3B3-207ENST00000566095 TMEM254Q8TBM7 123 aa5.56□□□□□ -1.52
SF3B3-207ENST00000566095 DMBT1Q9UGM3 2413 aaPredicted RBP5.56□□□□□ -1.52
SF3B3-207ENST00000566095 ABCA13Q86UQ4 5058 aa5.55□□□□□ -1.52
SF3B3-207ENST00000566095 MMP24-AS1A0A0U1RRL7 71 aa5.55□□□□□ -1.52
SF3B3-207ENST00000566095 hDV103S1A0JD37 113 aa5.55□□□□□ -1.52
SF3B3-207ENST00000566095 H3BPC8 53 aa5.55□□□□□ -1.52
SF3B3-207ENST00000566095 C8orf17Q9NRJ1 99 aa5.55□□□□□ -1.52
SF3B3-207ENST00000566095 HERC1Q15751 4861 aa5.55□□□□□ -1.52
SF3B3-207ENST00000566095 IGHV6-1A0A0B4J1U7 121 aa5.54□□□□□ -1.52
SF3B3-207ENST00000566095 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
SF3B3-207ENST00000566095 LRP1Q07954 4544 aaKnown RBP5.54□□□□□ -1.52
SF3B3-207ENST00000566095 IGLV7-46A0A075B6I9 117 aa5.53□□□□□ -1.52
SF3B3-207ENST00000566095 NDUFC1O43677 76 aa5.53□□□□□ -1.52
SF3B3-207ENST00000566095 LINC00313P59037 77 aa5.53□□□□□ -1.52
SF3B3-207ENST00000566095 KLKP1Q107X0 134 aa5.53□□□□□ -1.52
SF3B3-207ENST00000566095 PRR4Q16378 134 aa5.53□□□□□ -1.52
SF3B3-207ENST00000566095 TNXBP22105 4242 aa5.52□□□□□ -1.53
SF3B3-207ENST00000566095 RETNLBQ9BQ08 111 aa5.51□□□□□ -1.53
SF3B3-207ENST00000566095 MRPL34Q9BQ48 92 aaKnown RBP5.51□□□□□ -1.53
SF3B3-207ENST00000566095 LCE2BO14633 110 aa5.5□□□□□ -1.53
SF3B3-207ENST00000566095 Q8N9P0 234 aaPredicted RBP5.5□□□□□ -1.53
SF3B3-207ENST00000566095 MP68P56378 58 aa5.47□□□□□ -1.53
SF3B3-207ENST00000566095 WFDC13Q8IUB5 93 aa5.47□□□□□ -1.53
SF3B3-207ENST00000566095 TPRXLQ17RH7 258 aa5.46□□□□□ -1.54
SF3B3-207ENST00000566095 CCDC179H3BU77 68 aa5.45□□□□□ -1.54
SF3B3-207ENST00000566095 TRAV22A0A0B4J277 110 aa5.44□□□□□ -1.54
SF3B3-207ENST00000566095 A0A0U1RQV1 116 aa5.44□□□□□ -1.54
SF3B3-207ENST00000566095 KRTAP16-1A8MUX0 517 aa5.43□□□□□ -1.54
SF3B3-207ENST00000566095 NDUFS5O43920 106 aa5.43□□□□□ -1.54
SF3B3-207ENST00000566095 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
SF3B3-207ENST00000566095 C9orf92A6NGG3 77 aa5.42□□□□□ -1.54
SF3B3-207ENST00000566095 ATP5EP56381 51 aaPredicted RBP5.42□□□□□ -1.54
SF3B3-207ENST00000566095 TMEM258P61165 79 aa5.42□□□□□ -1.54
SF3B3-207ENST00000566095 KRTAP13-3Q3SY46 172 aa5.42□□□□□ -1.54
SF3B3-207ENST00000566095 ZCCHC13Q8WW36 166 aaKnown RBP5.42□□□□□ -1.54
SF3B3-207ENST00000566095 LOC101927531A0A1B0GV80 90 aa5.39□□□□□ -1.55
SF3B3-207ENST00000566095 Q75L30 129 aa5.39□□□□□ -1.55
SF3B3-207ENST00000566095 NOTCH2NLQ7Z3S9 236 aa5.39□□□□□ -1.55
SF3B3-207ENST00000566095 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
SF3B3-207ENST00000566095 H0Y9P7 68 aa5.38□□□□□ -1.55
SF3B3-207ENST00000566095 H7BZZ5 65 aa5.38□□□□□ -1.55
SF3B3-207ENST00000566095 ATP11AUNQ6ZP68 121 aa5.38□□□□□ -1.55
SF3B3-207ENST00000566095 A8MUU9 505 aa5.37□□□□□ -1.55
SF3B3-207ENST00000566095 SPANXA2-OT1Q8N9U9 137 aa5.37□□□□□ -1.55
SF3B3-207ENST00000566095 XP32Q5T750 250 aa5.35□□□□□ -1.55
SF3B3-207ENST00000566095 C1orf64Q8NEQ6 169 aa5.35□□□□□ -1.55
SF3B3-207ENST00000566095 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
SF3B3-207ENST00000566095 SEC61BP60468 96 aaKnown RBP5.34□□□□□ -1.55
SF3B3-207ENST00000566095 RPL37P61927 97 aaKnown RBP5.34□□□□□ -1.55
SF3B3-207ENST00000566095 LINC00208Q96KT6 92 aa5.34□□□□□ -1.55
SF3B3-207ENST00000566095 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
SF3B3-207ENST00000566095 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
SF3B3-207ENST00000566095 RPS28P62857 69 aaKnown RBP5.33□□□□□ -1.56
SF3B3-207ENST00000566095 SNURFQ9Y675 71 aa5.32□□□□□ -1.56
SF3B3-207ENST00000566095 CYP4F30PQ9H0H9 118 aa5.3□□□□□ -1.56
SF3B3-207ENST00000566095 Q5W150 140 aa5.29□□□□□ -1.56
SF3B3-207ENST00000566095 FAM236DA0A1B0GTK5 79 aa5.28□□□□□ -1.56
SF3B3-207ENST00000566095 IGKV2-30P06310 120 aa5.28□□□□□ -1.56
SF3B3-207ENST00000566095 FAM236CP0DP71 79 aa5.28□□□□□ -1.56
SF3B3-207ENST00000566095 CYSTM1Q9H1C7 97 aa5.28□□□□□ -1.56
SF3B3-207ENST00000566095 C7orf65Q6ZTY9 151 aa5.25□□□□□ -1.57
SF3B3-207ENST00000566095 SERP1Q9Y6X1 66 aa5.24□□□□□ -1.57
SF3B3-207ENST00000566095 PCOTHQ58A44 107 aa5.23□□□□□ -1.57
SF3B3-207ENST00000566095 IGKV2D-30A0A075B6S6 120 aa5.21□□□□□ -1.58
SF3B3-207ENST00000566095 A8MUN3 132 aa5.21□□□□□ -1.58
SF3B3-207ENST00000566095 KRTAP9-2Q9BYQ4 174 aa5.21□□□□□ -1.58
SF3B3-207ENST00000566095 SPINK7P58062 85 aa5.18□□□□□ -1.58
SF3B3-207ENST00000566095 HMCN2Q8NDA2 5059 aa5.18□□□□□ -1.58
SF3B3-207ENST00000566095 DMAC1Q96GE9 116 aa5.17□□□□□ -1.58
SF3B3-207ENST00000566095 HRES1P13985 223 aa5.15□□□□□ -1.59
SF3B3-207ENST00000566095 ACYP2P14621 99 aa5.15□□□□□ -1.59
SF3B3-207ENST00000566095 RBM12B-AS1Q9P1G2 102 aa5.15□□□□□ -1.59
SF3B3-207ENST00000566095 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
SF3B3-207ENST00000566095 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
SF3B3-207ENST00000566095 LPAP08519 4548 aa5.11□□□□□ -1.59
SF3B3-207ENST00000566095 LRP2P98164 4655 aa5.11□□□□□ -1.59
SF3B3-207ENST00000566095 V9GYY9 64 aa5.08□□□□□ -1.6
SF3B3-207ENST00000566095 MUC2Q02817 5179 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms