RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 C20orf166-AS1Q96NR2 134 aa11.25□□□□□ -0.61
SHCBP1-205ENST00000566016 DSCR10P59022 87 aa11.23□□□□□ -0.61
SHCBP1-205ENST00000566016 LINC00313P59037 77 aa11.23□□□□□ -0.61
SHCBP1-205ENST00000566016 A0A1B0GVX0 72 aa11.2□□□□□ -0.62
SHCBP1-205ENST00000566016 A8MUU9 505 aa11.2□□□□□ -0.62
SHCBP1-205ENST00000566016 IGHV6-1A0A0B4J1U7 121 aa11.19□□□□□ -0.62
SHCBP1-205ENST00000566016 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
SHCBP1-205ENST00000566016 KRTAP16-1A8MUX0 517 aa11.18□□□□□ -0.62
SHCBP1-205ENST00000566016 NREPQ16612 68 aa11.18□□□□□ -0.62
SHCBP1-205ENST00000566016 FAT4Q6V0I7 4981 aa11.17□□□□□ -0.62
SHCBP1-205ENST00000566016 ATP11AUNQ6ZP68 121 aa11.17□□□□□ -0.62
SHCBP1-205ENST00000566016 F8W1H4 67 aa11.16□□□□□ -0.62
SHCBP1-205ENST00000566016 NOTCH2NLQ7Z3S9 236 aa11.16□□□□□ -0.62
SHCBP1-205ENST00000566016 NDUFB1O75438 58 aa11.15□□□□□ -0.62
SHCBP1-205ENST00000566016 A8MWP4 228 aa11.14□□□□□ -0.63
SHCBP1-205ENST00000566016 IGKV3D-7A0A0C4DH55 119 aa11.07□□□□□ -0.64
SHCBP1-205ENST00000566016 Q6ZVQ6 151 aa11.05□□□□□ -0.64
SHCBP1-205ENST00000566016 PRR15Q8IV56 129 aa11.05□□□□□ -0.64
SHCBP1-205ENST00000566016 ETDBQ3ZM63 59 aa11.04□□□□□ -0.64
SHCBP1-205ENST00000566016 LCE2AQ5TA79 106 aaPredicted RBP11.03□□□□□ -0.64
SHCBP1-205ENST00000566016 C8orf17Q9NRJ1 99 aa11.03□□□□□ -0.64
SHCBP1-205ENST00000566016 BPY2O14599 106 aa11.01□□□□□ -0.65
SHCBP1-205ENST00000566016 KRTAP19-2Q3LHN2 52 aa11□□□□□ -0.65
SHCBP1-205ENST00000566016 LINC00846Q9NV44 126 aa10.99□□□□□ -0.65
SHCBP1-205ENST00000566016 Q8N9P0 234 aaPredicted RBP10.98□□□□□ -0.65
SHCBP1-205ENST00000566016 UBL5Q9BZL1 73 aa10.98□□□□□ -0.65
SHCBP1-205ENST00000566016 K7EQZ3 153 aa10.97□□□□□ -0.65
SHCBP1-205ENST00000566016 LCE2CQ5TA81 110 aa10.95□□□□□ -0.66
SHCBP1-205ENST00000566016 MMP24-AS1A0A0U1RRL7 71 aa10.94□□□□□ -0.66
SHCBP1-205ENST00000566016 TMEM254Q8TBM7 123 aa10.9□□□□□ -0.66
SHCBP1-205ENST00000566016 ZCCHC13Q8WW36 166 aaKnown RBP10.88□□□□□ -0.67
SHCBP1-205ENST00000566016 hDV103S1A0JD37 113 aa10.87□□□□□ -0.67
SHCBP1-205ENST00000566016 MRPL34Q9BQ48 92 aaKnown RBP10.87□□□□□ -0.67
SHCBP1-205ENST00000566016 A0A1B0GV90 55 aa10.86□□□□□ -0.67
SHCBP1-205ENST00000566016 Q8N9L7 120 aa10.84□□□□□ -0.67
SHCBP1-205ENST00000566016 FAM240AA0A1B0GVK7 77 aa10.82□□□□□ -0.68
SHCBP1-205ENST00000566016 COX6B2Q6YFQ2 88 aa10.82□□□□□ -0.68
SHCBP1-205ENST00000566016 ACYP1P07311 99 aa10.81□□□□□ -0.68
SHCBP1-205ENST00000566016 CXCL6P80162 114 aa10.81□□□□□ -0.68
SHCBP1-205ENST00000566016 MT1HP80294 61 aa10.79□□□□□ -0.68
SHCBP1-205ENST00000566016 CASC2Q6XLA1 102 aa10.77□□□□□ -0.69
SHCBP1-205ENST00000566016 WFDC13Q8IUB5 93 aa10.75□□□□□ -0.69
SHCBP1-205ENST00000566016 FLGP20930 4061 aaPredicted RBP10.74□□□□□ -0.69
SHCBP1-205ENST00000566016 HCG22E2RYF7 251 aa10.73□□□□□ -0.69
SHCBP1-205ENST00000566016 NDUFS5O43920 106 aa10.73□□□□□ -0.69
SHCBP1-205ENST00000566016 MPLKIPQ8TAP9 179 aa10.73□□□□□ -0.69
SHCBP1-205ENST00000566016 HRES1P13985 223 aa10.72□□□□□ -0.69
SHCBP1-205ENST00000566016 SPINK7P58062 85 aa10.71□□□□□ -0.69
SHCBP1-205ENST00000566016 ATP5EP2Q5VTU8 51 aa10.67□□□□□ -0.7
SHCBP1-205ENST00000566016 RBM12B-AS1Q9P1G2 102 aa10.67□□□□□ -0.7
SHCBP1-205ENST00000566016 Q5W150 140 aa10.6□□□□□ -0.71
SHCBP1-205ENST00000566016 FAM236DA0A1B0GTK5 79 aa10.59□□□□□ -0.71
SHCBP1-205ENST00000566016 M0R2T5 61 aa10.59□□□□□ -0.71
SHCBP1-205ENST00000566016 FAM236CP0DP71 79 aa10.59□□□□□ -0.71
SHCBP1-205ENST00000566016 LINC00643Q86TS7 51 aa10.55□□□□□ -0.72
SHCBP1-205ENST00000566016 J3QR89 54 aa10.55□□□□□ -0.72
SHCBP1-205ENST00000566016 TP53AIP1Q9HCN2 124 aa10.55□□□□□ -0.72
SHCBP1-205ENST00000566016 C7orf65Q6ZTY9 151 aa10.54□□□□□ -0.72
SHCBP1-205ENST00000566016 LORP23490 312 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-205ENST00000566016 KRTAP10-6P60371 365 aaPredicted RBP10.53□□□□□ -0.72
SHCBP1-205ENST00000566016 IGKV2D-30A0A075B6S6 120 aa10.49□□□□□ -0.73
SHCBP1-205ENST00000566016 IGKV2-30P06310 120 aa10.49□□□□□ -0.73
SHCBP1-205ENST00000566016 HIST1H4AP62805 103 aaKnown RBP10.48□□□□□ -0.73
SHCBP1-205ENST00000566016 KRTAP9-2Q9BYQ4 174 aa10.4□□□□□ -0.74
SHCBP1-205ENST00000566016 A0A087WVE0 104 aa10.36□□□□□ -0.75
SHCBP1-205ENST00000566016 TRAV22A0A0B4J277 110 aa10.34□□□□□ -0.75
SHCBP1-205ENST00000566016 LCE2DQ5TA82 110 aaPredicted RBP10.34□□□□□ -0.75
SHCBP1-205ENST00000566016 UQCRQO14949 82 aa10.3□□□□□ -0.76
SHCBP1-205ENST00000566016 H1FX-AS1Q4G0G2 97 aa10.3□□□□□ -0.76
SHCBP1-205ENST00000566016 K7ERU9 68 aa10.3□□□□□ -0.76
SHCBP1-205ENST00000566016 C4orf26Q17RF5 130 aa10.28□□□□□ -0.76
SHCBP1-205ENST00000566016 KRTAP9-8Q9BYQ0 159 aa10.27□□□□□ -0.77
SHCBP1-205ENST00000566016 LOC101927531A0A1B0GV80 90 aa10.25□□□□□ -0.77
SHCBP1-205ENST00000566016 ATOX1O00244 68 aa10.23□□□□□ -0.77
SHCBP1-205ENST00000566016 CYP4F30PQ9H0H9 118 aa10.23□□□□□ -0.77
SHCBP1-205ENST00000566016 OCR1Q9BZK8 76 aa10.2□□□□□ -0.78
SHCBP1-205ENST00000566016 H0Y9P7 68 aa10.19□□□□□ -0.78
SHCBP1-205ENST00000566016 IMUPQ9GZP8 106 aa10.18□□□□□ -0.78
SHCBP1-205ENST00000566016 MT2AP02795 61 aa10.15□□□□□ -0.78
SHCBP1-205ENST00000566016 C1orf64Q8NEQ6 169 aa10.14□□□□□ -0.79
SHCBP1-205ENST00000566016 KRTAP3-1Q9BYR8 98 aa10.14□□□□□ -0.79
SHCBP1-205ENST00000566016 MT-ATP8P03928 68 aa10.1□□□□□ -0.79
SHCBP1-205ENST00000566016 MP68P56378 58 aa10.08□□□□□ -0.8
SHCBP1-205ENST00000566016 SCGB1A1P11684 91 aa10.07□□□□□ -0.8
SHCBP1-205ENST00000566016 C5orf47Q569G3 176 aa10.07□□□□□ -0.8
SHCBP1-205ENST00000566016 MT1FP04733 61 aa10.06□□□□□ -0.8
SHCBP1-205ENST00000566016 LINC00208Q96KT6 92 aa10.05□□□□□ -0.8
SHCBP1-205ENST00000566016 H3BPC8 53 aa10.02□□□□□ -0.81
SHCBP1-205ENST00000566016 S4R3F8 94 aa10.02□□□□□ -0.81
SHCBP1-205ENST00000566016 KRTAP10-10P60014 251 aa10.01□□□□□ -0.81
SHCBP1-205ENST00000566016 FSIP2Q5CZC0 6907 aa9.97□□□□□ -0.81
SHCBP1-205ENST00000566016 FAM236AA0A1B0GUQ0 79 aa9.95□□□□□ -0.82
SHCBP1-205ENST00000566016 FAM236BA0A1B0GV22 79 aa9.95□□□□□ -0.82
SHCBP1-205ENST00000566016 LCA10Q71F78 164 aa9.95□□□□□ -0.82
SHCBP1-205ENST00000566016 KLKP1Q107X0 134 aa9.94□□□□□ -0.82
SHCBP1-205ENST00000566016 SMIM20Q8N5G0 67 aa9.94□□□□□ -0.82
SHCBP1-205ENST00000566016 KRTAP9-6A0A140TA67 174 aa9.93□□□□□ -0.82
SHCBP1-205ENST00000566016 KRTAP9-3Q9BYQ3 159 aa9.93□□□□□ -0.82
SHCBP1-205ENST00000566016 A8MUN3 132 aa9.92□□□□□ -0.82
SHCBP1-205ENST00000566016 CSAG1Q6PB30 78 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms