RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 IGKV4-1P06312 121 aa4.38□□□□□ -1.71
CDH1-208ENST00000565810 SIGMAR1Q99720 223 aa4.38□□□□□ -1.71
CDH1-208ENST00000565810 LINC00846Q9NV44 126 aa4.38□□□□□ -1.71
CDH1-208ENST00000565810 NDUFB1O75438 58 aa4.37□□□□□ -1.71
CDH1-208ENST00000565810 DEFB116Q30KQ4 102 aa4.37□□□□□ -1.71
CDH1-208ENST00000565810 Q6ZVQ6 151 aa4.37□□□□□ -1.71
CDH1-208ENST00000565810 Q96NJ1 140 aa4.37□□□□□ -1.71
CDH1-208ENST00000565810 BPY2O14599 106 aa4.36□□□□□ -1.71
CDH1-208ENST00000565810 K7ERU9 68 aa4.35□□□□□ -1.71
CDH1-208ENST00000565810 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
CDH1-208ENST00000565810 LPAP08519 4548 aa4.33□□□□□ -1.72
CDH1-208ENST00000565810 A8MWP4 228 aa4.33□□□□□ -1.72
CDH1-208ENST00000565810 TPRXLQ17RH7 258 aa4.33□□□□□ -1.72
CDH1-208ENST00000565810 IGHV6-1A0A0B4J1U7 121 aa4.32□□□□□ -1.72
CDH1-208ENST00000565810 CDIP1Q9H305 208 aa4.32□□□□□ -1.72
CDH1-208ENST00000565810 A0A1B0GVX0 72 aa4.31□□□□□ -1.72
CDH1-208ENST00000565810 C9orf92A6NGG3 77 aa4.31□□□□□ -1.72
CDH1-208ENST00000565810 C8orf87E5RJ46 101 aa4.31□□□□□ -1.72
CDH1-208ENST00000565810 LINC00313P59037 77 aa4.31□□□□□ -1.72
CDH1-208ENST00000565810 CXCL6P80162 114 aa4.31□□□□□ -1.72
CDH1-208ENST00000565810 LINC00643Q86TS7 51 aa4.31□□□□□ -1.72
CDH1-208ENST00000565810 IGKV3D-7A0A0C4DH55 119 aa4.3□□□□□ -1.72
CDH1-208ENST00000565810 DSCR10P59022 87 aa4.3□□□□□ -1.72
CDH1-208ENST00000565810 KRTAP13-3Q3SY46 172 aa4.3□□□□□ -1.72
CDH1-208ENST00000565810 LCE3BQ5TA77 95 aa4.3□□□□□ -1.72
CDH1-208ENST00000565810 ATP5EP2Q5VTU8 51 aa4.3□□□□□ -1.72
CDH1-208ENST00000565810 PRR15Q8IV56 129 aa4.3□□□□□ -1.72
CDH1-208ENST00000565810 LRP2P98164 4655 aa4.29□□□□□ -1.72
CDH1-208ENST00000565810 K7EQZ3 153 aa4.28□□□□□ -1.72
CDH1-208ENST00000565810 Q8N9L7 120 aa4.27□□□□□ -1.73
CDH1-208ENST00000565810 C8orf17Q9NRJ1 99 aa4.27□□□□□ -1.73
CDH1-208ENST00000565810 HIST1H4AP62805 103 aaKnown RBP4.25□□□□□ -1.73
CDH1-208ENST00000565810 NOTCH2NLQ7Z3S9 236 aa4.25□□□□□ -1.73
CDH1-208ENST00000565810 MUC17Q685J3 4493 aa4.24□□□□□ -1.73
CDH1-208ENST00000565810 hDV103S1A0JD37 113 aa4.24□□□□□ -1.73
CDH1-208ENST00000565810 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
CDH1-208ENST00000565810 MMP24-AS1A0A0U1RRL7 71 aa4.23□□□□□ -1.73
CDH1-208ENST00000565810 HCG22E2RYF7 251 aa4.23□□□□□ -1.73
CDH1-208ENST00000565810 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
CDH1-208ENST00000565810 Q75L30 129 aa4.23□□□□□ -1.73
CDH1-208ENST00000565810 WFDC13Q8IUB5 93 aa4.23□□□□□ -1.73
CDH1-208ENST00000565810 TMEM254Q8TBM7 123 aa4.23□□□□□ -1.73
CDH1-208ENST00000565810 MRPL34Q9BQ48 92 aaKnown RBP4.23□□□□□ -1.73
CDH1-208ENST00000565810 KRTAP4-12Q9BQ66 201 aa4.23□□□□□ -1.73
CDH1-208ENST00000565810 SEC61BP60468 96 aaKnown RBP4.22□□□□□ -1.73
CDH1-208ENST00000565810 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
CDH1-208ENST00000565810 C20orf166-AS1Q96NR2 134 aa4.22□□□□□ -1.73
CDH1-208ENST00000565810 A8MUU9 505 aa4.21□□□□□ -1.74
CDH1-208ENST00000565810 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
CDH1-208ENST00000565810 ATP11AUNQ6ZP68 121 aa4.21□□□□□ -1.74
CDH1-208ENST00000565810 NDUFS5O43920 106 aa4.2□□□□□ -1.74
CDH1-208ENST00000565810 Q8N9P0 234 aaPredicted RBP4.2□□□□□ -1.74
CDH1-208ENST00000565810 KRTAP9-9Q9BYP9 154 aa4.2□□□□□ -1.74
CDH1-208ENST00000565810 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
CDH1-208ENST00000565810 IMUPQ9GZP8 106 aa4.2□□□□□ -1.74
CDH1-208ENST00000565810 MT-ATP8P03928 68 aa4.19□□□□□ -1.74
CDH1-208ENST00000565810 A0A087WVE0 104 aa4.18□□□□□ -1.74
CDH1-208ENST00000565810 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
CDH1-208ENST00000565810 SCGB1A1P11684 91 aa4.15□□□□□ -1.75
CDH1-208ENST00000565810 ZCCHC13Q8WW36 166 aaKnown RBP4.15□□□□□ -1.75
CDH1-208ENST00000565810 TP53AIP1Q9HCN2 124 aa4.15□□□□□ -1.75
CDH1-208ENST00000565810 UBR4Q5T4S7 5183 aa4.11□□□□□ -1.75
CDH1-208ENST00000565810 FAM236AA0A1B0GUQ0 79 aa4.1□□□□□ -1.75
CDH1-208ENST00000565810 FAM236BA0A1B0GV22 79 aa4.1□□□□□ -1.75
CDH1-208ENST00000565810 UQCRQO14949 82 aa4.1□□□□□ -1.75
CDH1-208ENST00000565810 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
CDH1-208ENST00000565810 Q5W150 140 aa4.08□□□□□ -1.76
CDH1-208ENST00000565810 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
CDH1-208ENST00000565810 TRAV22A0A0B4J277 110 aa4.07□□□□□ -1.76
CDH1-208ENST00000565810 ATOX1O00244 68 aa4.07□□□□□ -1.76
CDH1-208ENST00000565810 SPINK7P58062 85 aa4.07□□□□□ -1.76
CDH1-208ENST00000565810 OCR1Q9BZK8 76 aa4.07□□□□□ -1.76
CDH1-208ENST00000565810 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
CDH1-208ENST00000565810 IGKV2-30P06310 120 aa4.06□□□□□ -1.76
CDH1-208ENST00000565810 MP68P56378 58 aa4.06□□□□□ -1.76
CDH1-208ENST00000565810 MUC2Q02817 5179 aa4.05□□□□□ -1.76
CDH1-208ENST00000565810 H0Y9P7 68 aa4.05□□□□□ -1.76
CDH1-208ENST00000565810 C5orf47Q569G3 176 aa4.05□□□□□ -1.76
CDH1-208ENST00000565810 C7orf65Q6ZTY9 151 aa4.05□□□□□ -1.76
CDH1-208ENST00000565810 TRAV7A0A075B6U4 112 aa4.04□□□□□ -1.76
CDH1-208ENST00000565810 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
CDH1-208ENST00000565810 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
CDH1-208ENST00000565810 A0A0U1RQV1 116 aa4.03□□□□□ -1.76
CDH1-208ENST00000565810 LOC101927531A0A1B0GV80 90 aa4.03□□□□□ -1.76
CDH1-208ENST00000565810 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
CDH1-208ENST00000565810 H3BPC8 53 aa4.02□□□□□ -1.77
CDH1-208ENST00000565810 LCE1DQ5T752 114 aa4.02□□□□□ -1.77
CDH1-208ENST00000565810 C1orf64Q8NEQ6 169 aa4.02□□□□□ -1.77
CDH1-208ENST00000565810 LINC00208Q96KT6 92 aa4.02□□□□□ -1.77
CDH1-208ENST00000565810 RBM12B-AS1Q9P1G2 102 aa4.02□□□□□ -1.77
CDH1-208ENST00000565810 SERP2Q8N6R1 65 aa4□□□□□ -1.77
CDH1-208ENST00000565810 CYP4F30PQ9H0H9 118 aa4□□□□□ -1.77
CDH1-208ENST00000565810 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
CDH1-208ENST00000565810 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
CDH1-208ENST00000565810 HRES1P13985 223 aa3.99□□□□□ -1.77
CDH1-208ENST00000565810 COX6B2Q6YFQ2 88 aa3.99□□□□□ -1.77
CDH1-208ENST00000565810 ANAPC13Q9BS18 74 aa3.96□□□□□ -1.78
CDH1-208ENST00000565810 FAT4Q6V0I7 4981 aa3.96□□□□□ -1.78
CDH1-208ENST00000565810 COX7CP15954 63 aa3.95□□□□□ -1.78
CDH1-208ENST00000565810 MPLKIPQ8TAP9 179 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms