RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 USH2AO75445 5202 aa9.44□□□□□ -0.9
CLN6-204ENST00000564752 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.43□□□□□ -0.9
CLN6-204ENST00000564752 TSTD3H0UI37 97 aa9.43□□□□□ -0.9
CLN6-204ENST00000564752 A0A1B0GVX0 72 aa9.42□□□□□ -0.9
CLN6-204ENST00000564752 JMJD7-PLA2G4BH0Y9G9 81 aa9.42□□□□□ -0.9
CLN6-204ENST00000564752 LYRM7Q5U5X0 104 aa9.42□□□□□ -0.9
CLN6-204ENST00000564752 C8orf87E5RJ46 101 aa9.41□□□□□ -0.9
CLN6-204ENST00000564752 KRTAP9-8Q9BYQ0 159 aa9.41□□□□□ -0.9
CLN6-204ENST00000564752 SSPOA2VEC9 5147 aa9.4□□□□□ -0.9
CLN6-204ENST00000564752 J3KT08 172 aa9.4□□□□□ -0.9
CLN6-204ENST00000564752 BATFQ16520 125 aa9.4□□□□□ -0.9
CLN6-204ENST00000564752 Q6ZQT0 140 aa9.4□□□□□ -0.9
CLN6-204ENST00000564752 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
CLN6-204ENST00000564752 PDE6GP18545 87 aa9.35□□□□□ -0.91
CLN6-204ENST00000564752 A0A1B0GW54 56 aa9.34□□□□□ -0.91
CLN6-204ENST00000564752 C14orf132Q9NPU4 83 aa9.34□□□□□ -0.91
CLN6-204ENST00000564752 NDUFB1O75438 58 aa9.33□□□□□ -0.92
CLN6-204ENST00000564752 FAM236DA0A1B0GTK5 79 aa9.31□□□□□ -0.92
CLN6-204ENST00000564752 FAM236CP0DP71 79 aa9.31□□□□□ -0.92
CLN6-204ENST00000564752 LOC105371267A0A1B0GV96 52 aa9.28□□□□□ -0.92
CLN6-204ENST00000564752 A8MWP4 228 aa9.28□□□□□ -0.92
CLN6-204ENST00000564752 RBM12B-AS1Q9P1G2 102 aa9.27□□□□□ -0.93
CLN6-204ENST00000564752 C9orf118A6NHY6 69 aa9.26□□□□□ -0.93
CLN6-204ENST00000564752 HRES1P13985 223 aa9.26□□□□□ -0.93
CLN6-204ENST00000564752 ZCCHC13Q8WW36 166 aaKnown RBP9.26□□□□□ -0.93
CLN6-204ENST00000564752 C8orf17Q9NRJ1 99 aa9.25□□□□□ -0.93
CLN6-204ENST00000564752 H3BT86 120 aa9.24□□□□□ -0.93
CLN6-204ENST00000564752 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
CLN6-204ENST00000564752 IGKV3D-7A0A0C4DH55 119 aa9.23□□□□□ -0.93
CLN6-204ENST00000564752 A0A1W2PPM0 123 aa9.23□□□□□ -0.93
CLN6-204ENST00000564752 TAX1BP3O14907 124 aa9.23□□□□□ -0.93
CLN6-204ENST00000564752 MT2AP02795 61 aa9.23□□□□□ -0.93
CLN6-204ENST00000564752 NREPQ16612 68 aa9.22□□□□□ -0.93
CLN6-204ENST00000564752 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
CLN6-204ENST00000564752 MTURNQ8N3F0 131 aa9.21□□□□□ -0.94
CLN6-204ENST00000564752 FCGBPQ9Y6R7 5405 aaPredicted RBP9.2□□□□□ -0.94
CLN6-204ENST00000564752 Q6ZVQ6 151 aa9.17□□□□□ -0.94
CLN6-204ENST00000564752 PRR15Q8IV56 129 aa9.17□□□□□ -0.94
CLN6-204ENST00000564752 MT1FP04733 61 aa9.16□□□□□ -0.94
CLN6-204ENST00000564752 SPINK7P58062 85 aa9.16□□□□□ -0.94
CLN6-204ENST00000564752 LCE2BO14633 110 aa9.13□□□□□ -0.95
CLN6-204ENST00000564752 KRTAP9-3Q9BYQ3 159 aa9.13□□□□□ -0.95
CLN6-204ENST00000564752 MMP24-AS1A0A0U1RRL7 71 aa9.12□□□□□ -0.95
CLN6-204ENST00000564752 SPCS1Q9Y6A9 102 aa9.12□□□□□ -0.95
CLN6-204ENST00000564752 KRTAP10-10P60014 251 aa9.11□□□□□ -0.95
CLN6-204ENST00000564752 K7EQZ3 153 aa9.1□□□□□ -0.95
CLN6-204ENST00000564752 TMEM254Q8TBM7 123 aa9.1□□□□□ -0.95
CLN6-204ENST00000564752 MRPL34Q9BQ48 92 aaKnown RBP9.1□□□□□ -0.95
CLN6-204ENST00000564752 KRTAP19-1Q8IUB9 90 aa9.09□□□□□ -0.95
CLN6-204ENST00000564752 BPY2O14599 106 aa9.07□□□□□ -0.96
CLN6-204ENST00000564752 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
CLN6-204ENST00000564752 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
CLN6-204ENST00000564752 NDUFS5O43920 106 aa9.04□□□□□ -0.96
CLN6-204ENST00000564752 COL5A1-AS1Q5SY13 56 aa9.03□□□□□ -0.96
CLN6-204ENST00000564752 SMCPP49901 116 aaPredicted RBP9.01□□□□□ -0.97
CLN6-204ENST00000564752 Q8N9L7 120 aa8.97□□□□□ -0.97
CLN6-204ENST00000564752 K7EP34 96 aa8.96□□□□□ -0.98
CLN6-204ENST00000564752 PRO0461Q9UI25 63 aa8.94□□□□□ -0.98
CLN6-204ENST00000564752 MACF1Q9UPN3 7388 aaKnown RBP8.94□□□□□ -0.98
CLN6-204ENST00000564752 CASC2Q6XLA1 102 aa8.93□□□□□ -0.98
CLN6-204ENST00000564752 UBL5Q9BZL1 73 aa8.92□□□□□ -0.98
CLN6-204ENST00000564752 SYNE2Q8WXH0 6885 aaKnown RBP8.91□□□□□ -0.98
CLN6-204ENST00000564752 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.98
CLN6-204ENST00000564752 IGKV2-30P06310 120 aa8.9□□□□□ -0.98
CLN6-204ENST00000564752 LINC00846Q9NV44 126 aa8.9□□□□□ -0.98
CLN6-204ENST00000564752 HCG22E2RYF7 251 aa8.89□□□□□ -0.99
CLN6-204ENST00000564752 C7orf65Q6ZTY9 151 aa8.89□□□□□ -0.99
CLN6-204ENST00000564752 Q5W150 140 aa8.88□□□□□ -0.99
CLN6-204ENST00000564752 KRTAP19-6Q3LI70 58 aa8.85□□□□□ -0.99
CLN6-204ENST00000564752 GTF2H5Q6ZYL4 71 aa8.85□□□□□ -0.99
CLN6-204ENST00000564752 H1FX-AS1Q4G0G2 97 aa8.84□□□□□ -0.99
CLN6-204ENST00000564752 CXCL6P80162 114 aa8.83□□□□□ -1
CLN6-204ENST00000564752 PCP4L1A6NKN8 68 aa8.81□□□□□ -1
CLN6-204ENST00000564752 F8W1H4 67 aa8.78□□□□□ -1
CLN6-204ENST00000564752 ETDBQ3ZM63 59 aa8.75□□□□□ -1.01
CLN6-204ENST00000564752 C4orf26Q17RF5 130 aa8.73□□□□□ -1.01
CLN6-204ENST00000564752 TP53AIP1Q9HCN2 124 aa8.66□□□□□ -1.02
CLN6-204ENST00000564752 KRTAP6-3Q3LI67 103 aa8.65□□□□□ -1.02
CLN6-204ENST00000564752 C1orf64Q8NEQ6 169 aa8.57□□□□□ -1.04
CLN6-204ENST00000564752 ACYP1P07311 99 aa8.56□□□□□ -1.04
CLN6-204ENST00000564752 C5orf47Q569G3 176 aa8.56□□□□□ -1.04
CLN6-204ENST00000564752 KRTAP3-1Q9BYR8 98 aa8.55□□□□□ -1.04
CLN6-204ENST00000564752 S4R3F8 94 aa8.55□□□□□ -1.04
CLN6-204ENST00000564752 FAM240AA0A1B0GVK7 77 aa8.52□□□□□ -1.05
CLN6-204ENST00000564752 ATP5EP2Q5VTU8 51 aa8.51□□□□□ -1.05
CLN6-204ENST00000564752 TRAV22A0A0B4J277 110 aa8.49□□□□□ -1.05
CLN6-204ENST00000564752 FAM236AA0A1B0GUQ0 79 aa8.48□□□□□ -1.05
CLN6-204ENST00000564752 FAM236BA0A1B0GV22 79 aa8.48□□□□□ -1.05
CLN6-204ENST00000564752 HIST1H4AP62805 103 aaKnown RBP8.47□□□□□ -1.05
CLN6-204ENST00000564752 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
CLN6-204ENST00000564752 LCA10Q71F78 164 aa8.47□□□□□ -1.05
CLN6-204ENST00000564752 CYP4F30PQ9H0H9 118 aa8.47□□□□□ -1.05
CLN6-204ENST00000564752 LOC101927531A0A1B0GV80 90 aa8.44□□□□□ -1.06
CLN6-204ENST00000564752 NEBP20929 6669 aa8.4□□□□□ -1.07
CLN6-204ENST00000564752 UQCRQO14949 82 aa8.38□□□□□ -1.07
CLN6-204ENST00000564752 MUC12Q9UKN1 5478 aa8.36□□□□□ -1.07
CLN6-204ENST00000564752 H0Y9P7 68 aa8.36□□□□□ -1.07
CLN6-204ENST00000564752 ATOX1O00244 68 aa8.35□□□□□ -1.07
CLN6-204ENST00000564752 MT1BP07438 61 aa8.35□□□□□ -1.07
CLN6-204ENST00000564752 LINC00643Q86TS7 51 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms