RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 C6orf48Q9UBA6 75 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 HERC2O95714 4834 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 SCN7AQ01118 1682 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.07□□□□□ -2.4
CHD9-211ENST00000564600 KDM5DQ9BY66 1539 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 DCAF1Q9Y4B6 1507 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 CUBNO60494 3623 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 QSER1Q2KHR3 1735 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 TIAM2Q8IVF5 1701 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 ANKRD26Q9UPS8 1709 aa0.07□□□□□ -2.4
CHD9-211ENST00000564600 NWD1Q149M9 1564 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 ANK2Q01484 3957 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 LAMC1P11047 1609 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 PTPN23Q9H3S7 1636 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 ALKQ9UM73 1620 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 MYO15AQ9UKN7 3530 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 PREX1Q8TCU6 1659 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 ERVK-7P63135 1459 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 ARHGAP35Q9NRY4 1499 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 A0A087WWC5 75 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 A8MTW9 85 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 PRM1P04553 51 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 DEFB130BP0DP73 79 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 DEFB130AP0DP74 79 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 FCER1GP30273 86 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 SPRR2AP35326 72 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 UTRNP46939 3433 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 XIRP2A4UGR9 3374 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 CSMD2Q7Z408 3487 aa0.06□□□□□ -2.4
CHD9-211ENST00000564600 NBPF19A0A087WUL8 3843 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 DNAH14Q0VDD8 3507 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 WDFY3Q8IZQ1 3526 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 LINC01549A6NIU2 74 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 CRIP1P50238 77 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 SVEP1Q4LDE5 3571 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 DNMBPQ6XZF7 1577 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 RELNP78509 3460 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 ASPMQ8IZT6 3477 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 PIK3C2BO00750 1634 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 CSMD1Q96PZ7 3565 aa0.05□□□□□ -2.4
CHD9-211ENST00000564600 TNRC6CQ9HCJ0 1690 aaKnown RBP0.05□□□□□ -2.4
CHD9-211ENST00000564600 DDX60LQ5H9U9 1706 aaKnown RBP0.04□□□□□ -2.4
CHD9-211ENST00000564600 SCN11AQ9UI33 1791 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 ZFHX4Q86UP3 3567 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 MAP3K1Q13233 1512 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 KIAA0586Q9BVV6 1533 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 BRCA2P51587 3418 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 M0QZ58 72 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 TNP1P09430 55 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 MT1HL1P0DM35 61 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 DEFB110Q30KQ9 67 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 CLPSL2Q6UWE3 100 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 DEFB106AQ8N104 65 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 SCRIBQ14160 1630 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 ARFGEF2Q9Y6D5 1785 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 KMT2AQ03164 3969 aa0.04□□□□□ -2.4
CHD9-211ENST00000564600 LMTK2Q8IWU2 1503 aa0.03□□□□□ -2.4
CHD9-211ENST00000564600 ADAMTS12P58397 1594 aa0.03□□□□□ -2.4
CHD9-211ENST00000564600 VPS13CQ709C8 3753 aa0.03□□□□□ -2.4
CHD9-211ENST00000564600 IGLV5-48A0A075B6I7 105 aa0.03□□□□□ -2.4
CHD9-211ENST00000564600 SMIM31A0A1B0GVY4 71 aa0.03□□□□□ -2.4
CHD9-211ENST00000564600 KRTAP6-1Q3LI64 71 aa0.03□□□□□ -2.4
CHD9-211ENST00000564600 LYSTQ99698 3801 aa0.03□□□□□ -2.4
CHD9-211ENST00000564600 S4R3F8 94 aa0.03□□□□□ -2.4
CHD9-211ENST00000564600 CFAP74Q9C0B2 1584 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 DIP2BQ9P265 1576 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 CEP170BQ9Y4F5 1589 aaPredicted RBP0.02□□□□□ -2.41
CHD9-211ENST00000564600 NESP48681 1621 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 USP32Q8NFA0 1604 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 SMG1Q96Q15 3661 aaKnown RBP0.02□□□□□ -2.41
CHD9-211ENST00000564600 CSMD3Q7Z407 3707 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 M0QY20 66 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 MT1AP04731 61 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 MT1BP07438 61 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 SPART-AS1P0CW21 52 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 PLNP26678 52 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 LELP1Q5T871 98 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 DEFB104AQ8WTQ1 72 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 HILPDAQ9Y5L2 63 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 SPENQ96T58 3664 aaKnown RBP0.02□□□□□ -2.41
CHD9-211ENST00000564600 ABCC6O95255 1503 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 PLXNC1O60486 1568 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 WIZO95785 1651 aa0.02□□□□□ -2.41
CHD9-211ENST00000564600 POLR1AO95602 1720 aaPredicted RBP0.01□□□□□ -2.41
CHD9-211ENST00000564600 ITSN1Q15811 1721 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 LRRIQ1Q96JM4 1722 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 SPTBN5Q9NRC6 3674 aaKnown RBP0.01□□□□□ -2.41
CHD9-211ENST00000564600 H0YAA0 97 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 M0R1W7 72 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 SPRR2EP22531 72 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 MT4P47944 62 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 DEFB131AP59861 70 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 KRTAP19-6Q3LI70 58 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 LINC00308Q8TCZ7 52 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 Q9Y3F1 56 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 TRRAPQ9Y4A5 3859 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 EEA1Q15075 1411 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 EFCAB6Q5THR3 1501 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 GLI2P10070 1586 aa0.01□□□□□ -2.41
CHD9-211ENST00000564600 CROCC2H7BZ55 1655 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms