RNA–Protein interactions for RNA: ENST00000564201.1

NR4A1-220, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 5

Gene NR4A1, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-220ENST00000564201 Q96NJ1 140 aa6.66□□□□□ -1.34
NR4A1-220ENST00000564201 A0A1B0GW54 56 aa6.65□□□□□ -1.34
NR4A1-220ENST00000564201 IGKV4-1P06312 121 aa6.64□□□□□ -1.35
NR4A1-220ENST00000564201 SIGMAR1Q99720 223 aa6.64□□□□□ -1.35
NR4A1-220ENST00000564201 NREPQ16612 68 aa6.63□□□□□ -1.35
NR4A1-220ENST00000564201 LINC00472Q9H8W2 130 aa6.63□□□□□ -1.35
NR4A1-220ENST00000564201 C9orf92A6NGG3 77 aa6.62□□□□□ -1.35
NR4A1-220ENST00000564201 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
NR4A1-220ENST00000564201 KRTAP13-3Q3SY46 172 aa6.61□□□□□ -1.35
NR4A1-220ENST00000564201 LINC00846Q9NV44 126 aa6.59□□□□□ -1.35
NR4A1-220ENST00000564201 J3KT08 172 aa6.57□□□□□ -1.36
NR4A1-220ENST00000564201 Q6ZVQ6 151 aa6.57□□□□□ -1.36
NR4A1-220ENST00000564201 HMCN2Q8NDA2 5059 aa6.57□□□□□ -1.36
NR4A1-220ENST00000564201 UBL5Q9BZL1 73 aa6.56□□□□□ -1.36
NR4A1-220ENST00000564201 LPAP08519 4548 aa6.55□□□□□ -1.36
NR4A1-220ENST00000564201 IGHV6-1A0A0B4J1U7 121 aa6.55□□□□□ -1.36
NR4A1-220ENST00000564201 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
NR4A1-220ENST00000564201 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
NR4A1-220ENST00000564201 BPY2O14599 106 aa6.54□□□□□ -1.36
NR4A1-220ENST00000564201 DSCR10P59022 87 aa6.54□□□□□ -1.36
NR4A1-220ENST00000564201 NDUFB1O75438 58 aa6.53□□□□□ -1.36
NR4A1-220ENST00000564201 A0A1B0GVX0 72 aa6.52□□□□□ -1.37
NR4A1-220ENST00000564201 ACYP1P07311 99 aa6.52□□□□□ -1.37
NR4A1-220ENST00000564201 A8MWP4 228 aa6.51□□□□□ -1.37
NR4A1-220ENST00000564201 LINC00313P59037 77 aa6.51□□□□□ -1.37
NR4A1-220ENST00000564201 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
NR4A1-220ENST00000564201 IGKV3D-7A0A0C4DH55 119 aa6.5□□□□□ -1.37
NR4A1-220ENST00000564201 FAM240AA0A1B0GVK7 77 aa6.5□□□□□ -1.37
NR4A1-220ENST00000564201 J3QR89 54 aa6.48□□□□□ -1.37
NR4A1-220ENST00000564201 K7EQZ3 153 aa6.48□□□□□ -1.37
NR4A1-220ENST00000564201 PRR15Q8IV56 129 aa6.48□□□□□ -1.37
NR4A1-220ENST00000564201 LRP2P98164 4655 aa6.47□□□□□ -1.37
NR4A1-220ENST00000564201 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
NR4A1-220ENST00000564201 Q8N9L7 120 aa6.47□□□□□ -1.37
NR4A1-220ENST00000564201 C8orf17Q9NRJ1 99 aa6.46□□□□□ -1.38
NR4A1-220ENST00000564201 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
NR4A1-220ENST00000564201 RPL37P61927 97 aaKnown RBP6.43□□□□□ -1.38
NR4A1-220ENST00000564201 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
NR4A1-220ENST00000564201 CXCL6P80162 114 aa6.42□□□□□ -1.38
NR4A1-220ENST00000564201 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
NR4A1-220ENST00000564201 MMP24-AS1A0A0U1RRL7 71 aa6.41□□□□□ -1.38
NR4A1-220ENST00000564201 PCOTHQ58A44 107 aa6.41□□□□□ -1.38
NR4A1-220ENST00000564201 Q75L30 129 aa6.41□□□□□ -1.38
NR4A1-220ENST00000564201 KRTAP4-8A0A0G2JLE6 195 aa6.4□□□□□ -1.38
NR4A1-220ENST00000564201 A8MUU9 505 aa6.4□□□□□ -1.38
NR4A1-220ENST00000564201 C20orf166-AS1Q96NR2 134 aa6.4□□□□□ -1.38
NR4A1-220ENST00000564201 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
NR4A1-220ENST00000564201 K7ERU9 68 aa6.39□□□□□ -1.39
NR4A1-220ENST00000564201 LINC00643Q86TS7 51 aa6.39□□□□□ -1.39
NR4A1-220ENST00000564201 WFDC13Q8IUB5 93 aa6.39□□□□□ -1.39
NR4A1-220ENST00000564201 ATP5EP2Q5VTU8 51 aa6.38□□□□□ -1.39
NR4A1-220ENST00000564201 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
NR4A1-220ENST00000564201 KRTAP9-7A8MTY7 169 aa6.37□□□□□ -1.39
NR4A1-220ENST00000564201 CASC2Q6XLA1 102 aa6.37□□□□□ -1.39
NR4A1-220ENST00000564201 TMEM254Q8TBM7 123 aa6.37□□□□□ -1.39
NR4A1-220ENST00000564201 HIST1H4AP62805 103 aaKnown RBP6.36□□□□□ -1.39
NR4A1-220ENST00000564201 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
NR4A1-220ENST00000564201 HCG22E2RYF7 251 aa6.35□□□□□ -1.39
NR4A1-220ENST00000564201 NDUFS5O43920 106 aa6.35□□□□□ -1.39
NR4A1-220ENST00000564201 Q8N9P0 234 aaPredicted RBP6.33□□□□□ -1.4
NR4A1-220ENST00000564201 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
NR4A1-220ENST00000564201 KRTAP4-1Q9BYQ7 146 aa6.31□□□□□ -1.4
NR4A1-220ENST00000564201 MUC17Q685J3 4493 aa6.3□□□□□ -1.4
NR4A1-220ENST00000564201 A0A087WVE0 104 aa6.29□□□□□ -1.4
NR4A1-220ENST00000564201 ZCCHC13Q8WW36 166 aaKnown RBP6.29□□□□□ -1.4
NR4A1-220ENST00000564201 MT-ATP8P03928 68 aa6.25□□□□□ -1.41
NR4A1-220ENST00000564201 KRTAP3-1Q9BYR8 98 aa6.24□□□□□ -1.41
NR4A1-220ENST00000564201 RNF213Q63HN8 5207 aa6.22□□□□□ -1.41
NR4A1-220ENST00000564201 Q5W150 140 aa6.22□□□□□ -1.41
NR4A1-220ENST00000564201 TP53AIP1Q9HCN2 124 aa6.19□□□□□ -1.42
NR4A1-220ENST00000564201 IMUPQ9GZP8 106 aa6.18□□□□□ -1.42
NR4A1-220ENST00000564201 SPINK7P58062 85 aa6.17□□□□□ -1.42
NR4A1-220ENST00000564201 KRTAP4-7Q9BYR0 210 aa6.17□□□□□ -1.42
NR4A1-220ENST00000564201 MUC2Q02817 5179 aa6.15□□□□□ -1.42
NR4A1-220ENST00000564201 IGKV2D-30A0A075B6S6 120 aa6.15□□□□□ -1.42
NR4A1-220ENST00000564201 IGKV2-30P06310 120 aa6.15□□□□□ -1.42
NR4A1-220ENST00000564201 SCGB1A1P11684 91 aa6.15□□□□□ -1.42
NR4A1-220ENST00000564201 A0A0U1RQV1 116 aa6.14□□□□□ -1.43
NR4A1-220ENST00000564201 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
NR4A1-220ENST00000564201 UQCRQO14949 82 aa6.13□□□□□ -1.43
NR4A1-220ENST00000564201 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
NR4A1-220ENST00000564201 TRAV22A0A0B4J277 110 aa6.11□□□□□ -1.43
NR4A1-220ENST00000564201 FAM236AA0A1B0GUQ0 79 aa6.11□□□□□ -1.43
NR4A1-220ENST00000564201 FAM236BA0A1B0GV22 79 aa6.11□□□□□ -1.43
NR4A1-220ENST00000564201 HRES1P13985 223 aa6.11□□□□□ -1.43
NR4A1-220ENST00000564201 COX6B2Q6YFQ2 88 aa6.11□□□□□ -1.43
NR4A1-220ENST00000564201 C7orf65Q6ZTY9 151 aa6.11□□□□□ -1.43
NR4A1-220ENST00000564201 KRTAP4-9Q9BYQ8 210 aa6.1□□□□□ -1.43
NR4A1-220ENST00000564201 OCR1Q9BZK8 76 aa6.1□□□□□ -1.43
NR4A1-220ENST00000564201 H0Y9P7 68 aa6.09□□□□□ -1.43
NR4A1-220ENST00000564201 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
NR4A1-220ENST00000564201 FAM236DA0A1B0GTK5 79 aa6.07□□□□□ -1.44
NR4A1-220ENST00000564201 FAM236CP0DP71 79 aa6.07□□□□□ -1.44
NR4A1-220ENST00000564201 RBM12B-AS1Q9P1G2 102 aa6.07□□□□□ -1.44
NR4A1-220ENST00000564201 LCE5AQ5TCM9 118 aa6.06□□□□□ -1.44
NR4A1-220ENST00000564201 ATOX1O00244 68 aa6.04□□□□□ -1.44
NR4A1-220ENST00000564201 MPLKIPQ8TAP9 179 aa6.04□□□□□ -1.44
NR4A1-220ENST00000564201 LOC101927531A0A1B0GV80 90 aa6.03□□□□□ -1.44
NR4A1-220ENST00000564201 MP68P56378 58 aa6.03□□□□□ -1.44
NR4A1-220ENST00000564201 LINC00208Q96KT6 92 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms