RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
MSLN-205ENST00000563941 SPINK6Q6UWN8 80 aa11.76□□□□□ -0.53
MSLN-205ENST00000563941 BRK1Q8WUW1 75 aa11.75□□□□□ -0.53
MSLN-205ENST00000563941 DNAH5Q8TE73 4624 aa11.75□□□□□ -0.53
MSLN-205ENST00000563941 PCOTHQ58A44 107 aa11.74□□□□□ -0.53
MSLN-205ENST00000563941 ALMS1Q8TCU4 4167 aa11.74□□□□□ -0.53
MSLN-205ENST00000563941 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
MSLN-205ENST00000563941 CD164Q04900 197 aa11.74□□□□□ -0.53
MSLN-205ENST00000563941 IGLV7-46A0A075B6I9 117 aa11.73□□□□□ -0.53
MSLN-205ENST00000563941 SSBP3-AS1Q7Z2R9 100 aa11.72□□□□□ -0.53
MSLN-205ENST00000563941 PSPHP1O15172 72 aa11.68□□□□□ -0.54
MSLN-205ENST00000563941 Q6ZSA8 131 aa11.66□□□□□ -0.54
MSLN-205ENST00000563941 V9GYY9 64 aa11.66□□□□□ -0.54
MSLN-205ENST00000563941 KRTAP10-1P60331 282 aa11.65□□□□□ -0.54
MSLN-205ENST00000563941 COA5Q86WW8 74 aa11.65□□□□□ -0.55
MSLN-205ENST00000563941 KRTAP13-2Q52LG2 175 aa11.6□□□□□ -0.55
MSLN-205ENST00000563941 A8MUN3 132 aa11.59□□□□□ -0.55
MSLN-205ENST00000563941 C8orf87E5RJ46 101 aa11.59□□□□□ -0.55
MSLN-205ENST00000563941 Q8N9P0 234 aaPredicted RBP11.59□□□□□ -0.55
MSLN-205ENST00000563941 Q5W150 140 aa11.59□□□□□ -0.55
MSLN-205ENST00000563941 PKD1P98161 4303 aa11.59□□□□□ -0.55
MSLN-205ENST00000563941 C1orf195Q5TG92 126 aa11.58□□□□□ -0.56
MSLN-205ENST00000563941 LOC101927531A0A1B0GV80 90 aa11.57□□□□□ -0.56
MSLN-205ENST00000563941 KRTAP13-3Q3SY46 172 aa11.57□□□□□ -0.56
MSLN-205ENST00000563941 HYDINQ4G0P3 5121 aa11.56□□□□□ -0.56
MSLN-205ENST00000563941 LIMD2Q9BT23 127 aa11.54□□□□□ -0.56
MSLN-205ENST00000563941 FAT2Q9NYQ8 4349 aa11.54□□□□□ -0.56
MSLN-205ENST00000563941 LRP1BQ9NZR2 4599 aa11.53□□□□□ -0.56
MSLN-205ENST00000563941 Q5VV11 94 aa11.53□□□□□ -0.56
MSLN-205ENST00000563941 LINC00313P59037 77 aa11.51□□□□□ -0.57
MSLN-205ENST00000563941 KRTAP1-4P0C5Y4 121 aa11.5□□□□□ -0.57
MSLN-205ENST00000563941 PRR15LQ9BU68 103 aa11.48□□□□□ -0.57
MSLN-205ENST00000563941 HRES1P13985 223 aa11.47□□□□□ -0.57
MSLN-205ENST00000563941 FAM229AH3BQW9 127 aa11.41□□□□□ -0.58
MSLN-205ENST00000563941 CHKB-CPT1BH3BT56 60 aa11.41□□□□□ -0.58
MSLN-205ENST00000563941 VPS13BQ7Z7G8 4022 aa11.4□□□□□ -0.58
MSLN-205ENST00000563941 KRTAP16-1A8MUX0 517 aa11.38□□□□□ -0.59
MSLN-205ENST00000563941 SPAG11AQ6PDA7 123 aa11.38□□□□□ -0.59
MSLN-205ENST00000563941 RETNLBQ9BQ08 111 aa11.38□□□□□ -0.59
MSLN-205ENST00000563941 SACSQ9NZJ4 4579 aa11.38□□□□□ -0.59
MSLN-205ENST00000563941 PLA2G1BP04054 148 aaKnown RBP11.38□□□□□ -0.59
MSLN-205ENST00000563941 Q75L30 129 aa11.37□□□□□ -0.59
MSLN-205ENST00000563941 LINC01558Q9Y6Z2 57 aa11.36□□□□□ -0.59
MSLN-205ENST00000563941 TYMSOSQ8TAI1 123 aa11.35□□□□□ -0.59
MSLN-205ENST00000563941 C4orf48Q5BLP8 95 aa11.34□□□□□ -0.59
MSLN-205ENST00000563941 A8MU10 97 aa11.32□□□□□ -0.6
MSLN-205ENST00000563941 IGKV2-30P06310 120 aa11.32□□□□□ -0.6
MSLN-205ENST00000563941 ACYP2P14621 99 aa11.3□□□□□ -0.6
MSLN-205ENST00000563941 SPINK1P00995 79 aa11.29□□□□□ -0.6
MSLN-205ENST00000563941 PRR26Q8N8Z3 221 aa11.28□□□□□ -0.6
MSLN-205ENST00000563941 DMAC1Q96GE9 116 aa11.28□□□□□ -0.6
MSLN-205ENST00000563941 PKHD1P08F94 4074 aa11.27□□□□□ -0.61
MSLN-205ENST00000563941 A6NED7 52 aa11.26□□□□□ -0.61
MSLN-205ENST00000563941 LCA10Q71F78 164 aa11.21□□□□□ -0.62
MSLN-205ENST00000563941 LINC00304Q8N9R0 145 aa11.19□□□□□ -0.62
MSLN-205ENST00000563941 IGKV2D-30A0A075B6S6 120 aa11.18□□□□□ -0.62
MSLN-205ENST00000563941 RPS29P62273 56 aaKnown RBP11.15□□□□□ -0.62
MSLN-205ENST00000563941 SMR3BP02814 79 aaPredicted RBP11.14□□□□□ -0.63
MSLN-205ENST00000563941 CDC42SE1Q9NRR8 79 aa11.14□□□□□ -0.63
MSLN-205ENST00000563941 SPINK7P58062 85 aa11.12□□□□□ -0.63
MSLN-205ENST00000563941 DYNC1H1Q14204 4646 aaKnown RBP11.11□□□□□ -0.63
MSLN-205ENST00000563941 PMAIP1Q13794 54 aa11.09□□□□□ -0.63
MSLN-205ENST00000563941 SPTSSBQ8NFR3 76 aa11.09□□□□□ -0.63
MSLN-205ENST00000563941 A0A1B0GVY2 172 aa11.08□□□□□ -0.64
MSLN-205ENST00000563941 ATP11AUNQ6ZP68 121 aa11.08□□□□□ -0.64
MSLN-205ENST00000563941 RYR2Q92736 4967 aa11.05□□□□□ -0.64
MSLN-205ENST00000563941 KMT2CQ8NEZ4 4911 aaKnown RBP11.05□□□□□ -0.64
MSLN-205ENST00000563941 C7orf65Q6ZTY9 151 aa11.04□□□□□ -0.64
MSLN-205ENST00000563941 KRTAP10-4P60372 401 aaPredicted RBP11.01□□□□□ -0.65
MSLN-205ENST00000563941 APOBP04114 4563 aaKnown RBP10.98□□□□□ -0.65
MSLN-205ENST00000563941 A0A1B0GU69 56 aa10.97□□□□□ -0.65
MSLN-205ENST00000563941 FAT1Q14517 4588 aa10.95□□□□□ -0.66
MSLN-205ENST00000563941 PKHD1L1Q86WI1 4243 aa10.95□□□□□ -0.66
MSLN-205ENST00000563941 C9orf92A6NGG3 77 aa10.94□□□□□ -0.66
MSLN-205ENST00000563941 A6NN06 94 aa10.92□□□□□ -0.66
MSLN-205ENST00000563941 Q8N1X5 172 aa10.9□□□□□ -0.66
MSLN-205ENST00000563941 A8MUU9 505 aa10.9□□□□□ -0.67
MSLN-205ENST00000563941 C20orf166-AS1Q96NR2 134 aa10.9□□□□□ -0.67
MSLN-205ENST00000563941 KTN1-AS1Q86SY8 53 aa10.84□□□□□ -0.67
MSLN-205ENST00000563941 SEC61GP60059 68 aa10.79□□□□□ -0.68
MSLN-205ENST00000563941 SPATA8Q6RVD6 105 aa10.76□□□□□ -0.69
MSLN-205ENST00000563941 UQCR11O14957 56 aa10.76□□□□□ -0.69
MSLN-205ENST00000563941 RYR3Q15413 4870 aa10.73□□□□□ -0.69
MSLN-205ENST00000563941 MIR22HGQ0VDD5 57 aa10.72□□□□□ -0.69
MSLN-205ENST00000563941 FLG2Q5D862 2391 aaPredicted RBP10.69□□□□□ -0.7
MSLN-205ENST00000563941 KRTAP3-1Q9BYR8 98 aa10.68□□□□□ -0.7
MSLN-205ENST00000563941 HSPG2P98160 4391 aa10.62□□□□□ -0.71
MSLN-205ENST00000563941 KRTAP10-8P60410 259 aa10.58□□□□□ -0.72
MSLN-205ENST00000563941 FAT3Q8TDW7 4589 aa10.58□□□□□ -0.72
MSLN-205ENST00000563941 TNXBP22105 4242 aa10.57□□□□□ -0.72
MSLN-205ENST00000563941 Q5VSD8 79 aa10.57□□□□□ -0.72
MSLN-205ENST00000563941 LRP1Q07954 4544 aaKnown RBP10.55□□□□□ -0.72
MSLN-205ENST00000563941 COX6B2Q6YFQ2 88 aa10.53□□□□□ -0.72
MSLN-205ENST00000563941 RBM12B-AS1Q9P1G2 102 aa10.52□□□□□ -0.73
MSLN-205ENST00000563941 RYR1P21817 5038 aa10.5□□□□□ -0.73
MSLN-205ENST00000563941 RPL37P61927 97 aaKnown RBP10.43□□□□□ -0.74
MSLN-205ENST00000563941 H0YAA0 97 aa10.42□□□□□ -0.74
MSLN-205ENST00000563941 KRTAP17-1Q9BYP8 105 aa10.42□□□□□ -0.74
MSLN-205ENST00000563941 A0A1B0GU33 70 aa10.4□□□□□ -0.74
MSLN-205ENST00000563941 ADM2Q7Z4H4 148 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms