RNA–Protein interactions for RNA: ENST00000563688.5

SCAPER-208, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 2

Gene SCAPER, Length 549 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-208	ENST00000563688	ATP7B	P35670	1465 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	C20orf202	A1L168	122 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	LINC01546	A6NGU7	62 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	FAM223B	A6NKX1	122 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	SNAPC5	O75971	98 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	MT2A	P02795	61 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	IGLC3	P0DOY3	106 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	MT1G	P13640	62 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	LINC00158	P58513	81 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688		Q0VG73	95 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	CATR1	Q13166	79 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	KRTAP19-5	Q3LI72	72 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	LELP1	Q5T871	98 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	LINC00643	Q86TS7	51 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	FAM223A	Q8IWN6	122 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	LCN9	Q8WX39	176 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	S100Z	Q8WXG8	99 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	GAFA1	Q96PS6	74 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	UBL5	Q9BZL1	73 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	NALCN	Q8IZF0	1738 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	TMEM131L	A2VDJ0	1609 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	ABCC3	O15438	1527 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	ABCC1	P33527	1531 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	ANKAR	Q7Z5J8	1434 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	VPS8	Q8N3P4	1428 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	RGPD3	A6NKT7	1758 aa	Predicted RBP	-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	RGPD4	Q7Z3J3	1758 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	C5	P01031	1676 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	SCN7A	Q01118	1682 aa		-0.14	□□□□□ -2.43
SCAPER-208	ENST00000563688	NWD1	Q149M9	1564 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	PZP	P20742	1482 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	CCDC18	Q5T9S5	1454 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	UBR1	Q8IWV7	1749 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	MADD	Q8WXG6	1647 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	IGLV5-48	A0A075B6I7	105 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	CEBPZOS	A8MTT3	80 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	OOSP1	A8MZH6	123 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	UMAD1	C9J7I0	102 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	DLEU1	O43261	78 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	SMR3B	P02814	79 aa	Predicted RBP	-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	MT1F	P04733	61 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	IGLC2	P0DOY2	106 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	WT1-AS	Q06250	92 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	HSD52	Q0P140	79 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	DEFB136	Q30KP8	78 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	DEFB110	Q30KQ9	67 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	KRTAP19-2	Q3LHN2	52 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	KCNQ1DN	Q9H478	68 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688		S4R3F8	94 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	LRRC7	Q96NW7	1537 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	DUOX2	Q9NRD8	1548 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	CEP162	Q5TB80	1403 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	ZNF831	Q5JPB2	1677 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	ZC3H13	Q5T200	1668 aa	Known RBP	-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	MYH4	Q9Y623	1939 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	DIP2B	Q9P265	1576 aa		-0.15	□□□□□ -2.43
SCAPER-208	ENST00000563688	SPHKAP	Q2M3C7	1700 aa		-0.16	□□□□□ -2.43
SCAPER-208	ENST00000563688	CDC42BPA	Q5VT25	1732 aa		-0.16	□□□□□ -2.43
SCAPER-208	ENST00000563688	SUPT6H	Q7KZ85	1726 aa	Known RBP	-0.16	□□□□□ -2.43
SCAPER-208	ENST00000563688	MON2	Q7Z3U7	1717 aa		-0.16	□□□□□ -2.43
SCAPER-208	ENST00000563688	NES	P48681	1621 aa		-0.16	□□□□□ -2.43
SCAPER-208	ENST00000563688	MAP3K4	Q9Y6R4	1608 aa		-0.16	□□□□□ -2.43
SCAPER-208	ENST00000563688	LTN1	O94822	1766 aa		-0.16	□□□□□ -2.43
SCAPER-208	ENST00000563688	TNRC6C	Q9HCJ0	1690 aa	Known RBP	-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	MYMX	A0A1B0GTQ4	84 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	LINC01549	A6NIU2	74 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	IQCF6	A8MYZ5	107 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688		M0QY20	66 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	S100A8	P05109	93 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	DEFB131A	P59861	70 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	RPS29	P62273	56 aa	Known RBP	-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	DEFB121	Q5J5C9	76 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	C2orf88	Q9BSF0	95 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688		Q9H521	79 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	TMEM167B	Q9NRX6	74 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	GNG8	Q9UK08	70 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688		V9GYS6	101 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	UACA	Q9BZF9	1416 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	CDC42BPG	Q6DT37	1551 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	TTC37	Q6PGP7	1564 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	ITSN1	Q15811	1721 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	TOP2B	Q02880	1626 aa		-0.16	□□□□□ -2.44
SCAPER-208	ENST00000563688	ZFYVE16	Q7Z3T8	1539 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	CLASP1	Q7Z460	1538 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	ASXL1	Q8IXJ9	1541 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	TRAV21	A0A0B4J279	112 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688		A0A1B0GV90	55 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	ETDC	A0A1B0GVM5	59 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	LINC00587	B1AMM8	73 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688		M0R143	59 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	GNGT2	O14610	69 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	NDUFA3	O95167	84 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	C4A	P0C0L4	1744 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	C4B	P0C0L5	1744 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	SPART-AS1	P0CW21	52 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	IAPP	P10997	89 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	DDX60L	Q5H9U9	1706 aa	Known RBP	-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	COL5A1-AS1	Q5SY13	56 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	DEFB107A	Q8IZN7	70 aa		-0.17	□□□□□ -2.44
SCAPER-208	ENST00000563688	WFDC9	Q8NEX5	89 aa		-0.17	□□□□□ -2.44

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms