RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 CRYGAP11844 174 aa2.46□□□□□ -2.02
LINC00254-201ENST00000563416 IFITM1P13164 125 aa2.46□□□□□ -2.02
LINC00254-201ENST00000563416 S100A12P80511 92 aa2.46□□□□□ -2.02
LINC00254-201ENST00000563416 S100A7L2Q5SY68 101 aa2.46□□□□□ -2.02
LINC00254-201ENST00000563416 SPRR4Q96PI1 79 aa2.46□□□□□ -2.02
LINC00254-201ENST00000563416 ZNF73O43830 326 aaPredicted RBP2.45□□□□□ -2.02
LINC00254-201ENST00000563416 HRES1P13985 223 aa2.45□□□□□ -2.02
LINC00254-201ENST00000563416 C2orf91Q6ZV80 131 aa2.45□□□□□ -2.02
LINC00254-201ENST00000563416 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
LINC00254-201ENST00000563416 Q9BRP9 147 aa2.45□□□□□ -2.02
LINC00254-201ENST00000563416 MUC17Q685J3 4493 aa2.45□□□□□ -2.02
LINC00254-201ENST00000563416 DLEU1O43261 78 aa2.44□□□□□ -2.02
LINC00254-201ENST00000563416 ERC2-IT1O76042 136 aa2.44□□□□□ -2.02
LINC00254-201ENST00000563416 COX8AP10176 69 aa2.44□□□□□ -2.02
LINC00254-201ENST00000563416 LYRM7Q5U5X0 104 aa2.44□□□□□ -2.02
LINC00254-201ENST00000563416 MUSTN1Q8IVN3 82 aa2.44□□□□□ -2.02
LINC00254-201ENST00000563416 IMUPQ9GZP8 106 aa2.44□□□□□ -2.02
LINC00254-201ENST00000563416 TRBV7-6A0A0J9YX20 115 aa2.43□□□□□ -2.02
LINC00254-201ENST00000563416 ELOF1P60002 83 aaKnown RBP2.43□□□□□ -2.02
LINC00254-201ENST00000563416 SS18L2Q9UHA2 77 aa2.43□□□□□ -2.02
LINC00254-201ENST00000563416 TRAV13-2A0A0B4J235 113 aa2.42□□□□□ -2.02
LINC00254-201ENST00000563416 SPRR1BP22528 89 aa2.42□□□□□ -2.02
LINC00254-201ENST00000563416 HINT1P49773 126 aaPredicted RBP2.42□□□□□ -2.02
LINC00254-201ENST00000563416 SPATA45Q537H7 98 aa2.42□□□□□ -2.02
LINC00254-201ENST00000563416 LINC00304Q8N9R0 145 aa2.42□□□□□ -2.02
LINC00254-201ENST00000563416 VAMP8Q9BV40 100 aa2.42□□□□□ -2.02
LINC00254-201ENST00000563416 HIGD1BQ9P298 99 aa2.42□□□□□ -2.02
LINC00254-201ENST00000563416 RNF213Q63HN8 5207 aa2.42□□□□□ -2.02
LINC00254-201ENST00000563416 IGKV4-1P06312 121 aa2.41□□□□□ -2.02
LINC00254-201ENST00000563416 COX7BP24311 80 aa2.41□□□□□ -2.02
LINC00254-201ENST00000563416 PYY3Q5JQD4 70 aa2.41□□□□□ -2.02
LINC00254-201ENST00000563416 SPAG11AQ6PDA7 123 aa2.41□□□□□ -2.02
LINC00254-201ENST00000563416 SMIM11BQ8TCY0 68 aa2.41□□□□□ -2.02
LINC00254-201ENST00000563416 IGLV5-48A0A075B6I7 105 aa2.4□□□□□ -2.03
LINC00254-201ENST00000563416 TSTD3H0UI37 97 aa2.4□□□□□ -2.03
LINC00254-201ENST00000563416 RPS29P62273 56 aaKnown RBP2.4□□□□□ -2.03
LINC00254-201ENST00000563416 LCA10Q71F78 164 aa2.4□□□□□ -2.03
LINC00254-201ENST00000563416 SSBP3-AS1Q7Z2R9 100 aa2.4□□□□□ -2.03
LINC00254-201ENST00000563416 C14orf144Q96I85 54 aa2.4□□□□□ -2.03
LINC00254-201ENST00000563416 LOC105371267A0A1B0GV96 52 aa2.39□□□□□ -2.03
LINC00254-201ENST00000563416 A0A1W2PNM2 257 aa2.39□□□□□ -2.03
LINC00254-201ENST00000563416 SPINK1P00995 79 aa2.39□□□□□ -2.03
LINC00254-201ENST00000563416 NHP2Q9NX24 153 aaKnown RBP2.39□□□□□ -2.03
LINC00254-201ENST00000563416 LAMTOR3Q9UHA4 124 aa2.39□□□□□ -2.03
LINC00254-201ENST00000563416 TEX49A0A1B0GTD5 131 aa2.38□□□□□ -2.03
LINC00254-201ENST00000563416 H3BT86 120 aa2.38□□□□□ -2.03
LINC00254-201ENST00000563416 TPRXLQ17RH7 258 aa2.38□□□□□ -2.03
LINC00254-201ENST00000563416 LINC00575Q6W349 94 aa2.38□□□□□ -2.03
LINC00254-201ENST00000563416 C12orf57Q99622 126 aa2.38□□□□□ -2.03
LINC00254-201ENST00000563416 RETNLBQ9BQ08 111 aa2.38□□□□□ -2.03
LINC00254-201ENST00000563416 TRAV7A0A075B6U4 112 aa2.37□□□□□ -2.03
LINC00254-201ENST00000563416 FXYD2P54710 66 aa2.37□□□□□ -2.03
LINC00254-201ENST00000563416 BVES-AS1Q5T3Y7 98 aa2.37□□□□□ -2.03
LINC00254-201ENST00000563416 C9orf153Q5TBE3 101 aa2.37□□□□□ -2.03
LINC00254-201ENST00000563416 FP248Q71RG6 208 aaPredicted RBP2.37□□□□□ -2.03
LINC00254-201ENST00000563416 hADV29S1A0JD25 119 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 H7C2G1 150 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 HSD52Q0P140 79 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.36□□□□□ -2.03
LINC00254-201ENST00000563416 Q6ZQY7 126 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 DEFB105AQ8NG35 78 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 PPDPFLQ8WWR9 84 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 RAB37Q96AX2 223 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 UQCR10Q9UDW1 63 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 PRO1854Q9UHT4 67 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 MUC2Q02817 5179 aa2.36□□□□□ -2.03
LINC00254-201ENST00000563416 H0YGX0 51 aa2.35□□□□□ -2.03
LINC00254-201ENST00000563416 TCL1BO95988 128 aa2.35□□□□□ -2.03
LINC00254-201ENST00000563416 Q5XG85 94 aa2.35□□□□□ -2.03
LINC00254-201ENST00000563416 KTN1-AS1Q86SY8 53 aa2.35□□□□□ -2.03
LINC00254-201ENST00000563416 LIMD2Q9BT23 127 aa2.35□□□□□ -2.03
LINC00254-201ENST00000563416 PRO1933Q9H354 126 aa2.35□□□□□ -2.03
LINC00254-201ENST00000563416 A0A1B0GX51 115 aa2.34□□□□□ -2.03
LINC00254-201ENST00000563416 SMIM6P0DI80 62 aa2.34□□□□□ -2.03
LINC00254-201ENST00000563416 SCGB1A1P11684 91 aa2.34□□□□□ -2.03
LINC00254-201ENST00000563416 OCIAD2Q56VL3 154 aa2.34□□□□□ -2.03
LINC00254-201ENST00000563416 TAX1BP3O14907 124 aa2.33□□□□□ -2.04
LINC00254-201ENST00000563416 Q6JHZ5 121 aa2.33□□□□□ -2.04
LINC00254-201ENST00000563416 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
LINC00254-201ENST00000563416 CLEC2BQ92478 149 aa2.33□□□□□ -2.04
LINC00254-201ENST00000563416 A0A0G2JQZ4 141 aa2.32□□□□□ -2.04
LINC00254-201ENST00000563416 F8WEM9 126 aa2.32□□□□□ -2.04
LINC00254-201ENST00000563416 K7ERJ3 54 aa2.32□□□□□ -2.04
LINC00254-201ENST00000563416 SNCGO76070 127 aa2.32□□□□□ -2.04
LINC00254-201ENST00000563416 ASB16-AS1Q495Z4 193 aa2.32□□□□□ -2.04
LINC00254-201ENST00000563416 HRCT1Q6UXD1 115 aa2.32□□□□□ -2.04
LINC00254-201ENST00000563416 FAT4Q6V0I7 4981 aa2.32□□□□□ -2.04
LINC00254-201ENST00000563416 C20orf166-AS1Q96NR2 134 aa2.31□□□□□ -2.04
LINC00254-201ENST00000563416 TRBV7-7A0A0K0K1E9 115 aa2.3□□□□□ -2.04
LINC00254-201ENST00000563416 M0R143 59 aa2.3□□□□□ -2.04
LINC00254-201ENST00000563416 TRACP01848 142 aa2.3□□□□□ -2.04
LINC00254-201ENST00000563416 COX6CP09669 75 aa2.3□□□□□ -2.04
LINC00254-201ENST00000563416 SNHG12Q9BXW3 62 aa2.3□□□□□ -2.04
LINC00254-201ENST00000563416 H3BUT2 72 aa2.29□□□□□ -2.04
LINC00254-201ENST00000563416 DNAL4O96015 105 aa2.29□□□□□ -2.04
LINC00254-201ENST00000563416 TMEM258P61165 79 aa2.29□□□□□ -2.04
LINC00254-201ENST00000563416 RPS28P62857 69 aaKnown RBP2.29□□□□□ -2.04
LINC00254-201ENST00000563416 ORMDL1Q9P0S3 153 aa2.29□□□□□ -2.04
LINC00254-201ENST00000563416 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms