RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 NREPQ16612 68 aa7.56□□□□□ -1.2
SPG7-207ENST00000563218 Q6ZVQ6 151 aa7.56□□□□□ -1.2
SPG7-207ENST00000563218 KRTAP4-1Q9BYQ7 146 aa7.56□□□□□ -1.2
SPG7-207ENST00000563218 SS18L2Q9UHA2 77 aa7.53□□□□□ -1.2
SPG7-207ENST00000563218 C4orf48Q5BLP8 95 aa7.52□□□□□ -1.21
SPG7-207ENST00000563218 KRTAP13-3Q3SY46 172 aa7.51□□□□□ -1.21
SPG7-207ENST00000563218 ATP5EP2Q5VTU8 51 aa7.51□□□□□ -1.21
SPG7-207ENST00000563218 IGKV3D-7A0A0C4DH55 119 aa7.49□□□□□ -1.21
SPG7-207ENST00000563218 ANAPC13Q9BS18 74 aa7.49□□□□□ -1.21
SPG7-207ENST00000563218 BPY2O14599 106 aa7.48□□□□□ -1.21
SPG7-207ENST00000563218 SPAG11AQ6PDA7 123 aa7.48□□□□□ -1.21
SPG7-207ENST00000563218 CXCL6P80162 114 aa7.47□□□□□ -1.21
SPG7-207ENST00000563218 ASB16-AS1Q495Z4 193 aa7.47□□□□□ -1.21
SPG7-207ENST00000563218 FP248Q71RG6 208 aaPredicted RBP7.47□□□□□ -1.21
SPG7-207ENST00000563218 LIMD2Q9BT23 127 aa7.47□□□□□ -1.21
SPG7-207ENST00000563218 LCE2BO14633 110 aa7.46□□□□□ -1.22
SPG7-207ENST00000563218 SPINK1P00995 79 aa7.46□□□□□ -1.22
SPG7-207ENST00000563218 LINC00472Q9H8W2 130 aa7.44□□□□□ -1.22
SPG7-207ENST00000563218 J3KT08 172 aa7.43□□□□□ -1.22
SPG7-207ENST00000563218 DEFB116Q30KQ4 102 aa7.43□□□□□ -1.22
SPG7-207ENST00000563218 Q5XG85 94 aa7.43□□□□□ -1.22
SPG7-207ENST00000563218 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
SPG7-207ENST00000563218 HIST1H4AP62805 103 aaKnown RBP7.41□□□□□ -1.22
SPG7-207ENST00000563218 Q96NJ1 140 aa7.41□□□□□ -1.22
SPG7-207ENST00000563218 FAM236AA0A1B0GUQ0 79 aa7.4□□□□□ -1.22
SPG7-207ENST00000563218 FAM236BA0A1B0GV22 79 aa7.4□□□□□ -1.22
SPG7-207ENST00000563218 IGKV4-1P06312 121 aa7.4□□□□□ -1.22
SPG7-207ENST00000563218 DSCR10P59022 87 aa7.39□□□□□ -1.23
SPG7-207ENST00000563218 LCE2CQ5TA81 110 aa7.38□□□□□ -1.23
SPG7-207ENST00000563218 ATOX1O00244 68 aa7.37□□□□□ -1.23
SPG7-207ENST00000563218 SEC61BP60468 96 aaKnown RBP7.37□□□□□ -1.23
SPG7-207ENST00000563218 Q8N9L7 120 aa7.37□□□□□ -1.23
SPG7-207ENST00000563218 A8MWP4 228 aa7.36□□□□□ -1.23
SPG7-207ENST00000563218 NDUFB1O75438 58 aa7.36□□□□□ -1.23
SPG7-207ENST00000563218 C1orf195Q5TG92 126 aa7.36□□□□□ -1.23
SPG7-207ENST00000563218 K7EQZ3 153 aa7.35□□□□□ -1.23
SPG7-207ENST00000563218 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
SPG7-207ENST00000563218 XP32Q5T750 250 aa7.35□□□□□ -1.23
SPG7-207ENST00000563218 A0A087WVE0 104 aa7.34□□□□□ -1.23
SPG7-207ENST00000563218 PRR15Q8IV56 129 aa7.33□□□□□ -1.24
SPG7-207ENST00000563218 A0A1B0GVX0 72 aa7.3□□□□□ -1.24
SPG7-207ENST00000563218 KRTAP9-7A8MTY7 169 aa7.3□□□□□ -1.24
SPG7-207ENST00000563218 UQCRQO14949 82 aa7.3□□□□□ -1.24
SPG7-207ENST00000563218 MT1HP80294 61 aa7.3□□□□□ -1.24
SPG7-207ENST00000563218 IGHV6-1A0A0B4J1U7 121 aa7.29□□□□□ -1.24
SPG7-207ENST00000563218 CCDC179H3BU77 68 aa7.29□□□□□ -1.24
SPG7-207ENST00000563218 COX7CP15954 63 aa7.29□□□□□ -1.24
SPG7-207ENST00000563218 FLGP20930 4061 aaPredicted RBP7.27□□□□□ -1.24
SPG7-207ENST00000563218 HCG22E2RYF7 251 aa7.27□□□□□ -1.25
SPG7-207ENST00000563218 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
SPG7-207ENST00000563218 C8orf17Q9NRJ1 99 aa7.26□□□□□ -1.25
SPG7-207ENST00000563218 C8orf87E5RJ46 101 aa7.25□□□□□ -1.25
SPG7-207ENST00000563218 PCOTHQ58A44 107 aa7.25□□□□□ -1.25
SPG7-207ENST00000563218 SMIM20Q8N5G0 67 aa7.25□□□□□ -1.25
SPG7-207ENST00000563218 MMP24-AS1A0A0U1RRL7 71 aa7.24□□□□□ -1.25
SPG7-207ENST00000563218 CASC2Q6XLA1 102 aa7.24□□□□□ -1.25
SPG7-207ENST00000563218 WFDC13Q8IUB5 93 aa7.24□□□□□ -1.25
SPG7-207ENST00000563218 C9orf92A6NGG3 77 aa7.23□□□□□ -1.25
SPG7-207ENST00000563218 hDV103S1A0JD37 113 aa7.22□□□□□ -1.25
SPG7-207ENST00000563218 LINC00313P59037 77 aa7.21□□□□□ -1.26
SPG7-207ENST00000563218 LORP23490 312 aaPredicted RBP7.2□□□□□ -1.26
SPG7-207ENST00000563218 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.19□□□□□ -1.26
SPG7-207ENST00000563218 KRTAP10-6P60371 365 aaPredicted RBP7.19□□□□□ -1.26
SPG7-207ENST00000563218 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
SPG7-207ENST00000563218 TMEM254Q8TBM7 123 aa7.19□□□□□ -1.26
SPG7-207ENST00000563218 TRAV7A0A075B6U4 112 aa7.18□□□□□ -1.26
SPG7-207ENST00000563218 MRPL34Q9BQ48 92 aaKnown RBP7.17□□□□□ -1.26
SPG7-207ENST00000563218 NDUFS5O43920 106 aa7.13□□□□□ -1.27
SPG7-207ENST00000563218 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
SPG7-207ENST00000563218 OCR1Q9BZK8 76 aa7.11□□□□□ -1.27
SPG7-207ENST00000563218 TP53AIP1Q9HCN2 124 aa7.09□□□□□ -1.27
SPG7-207ENST00000563218 TMEM258P61165 79 aa7.08□□□□□ -1.28
SPG7-207ENST00000563218 Q8N9P0 234 aaPredicted RBP7.08□□□□□ -1.28
SPG7-207ENST00000563218 M0R2T5 61 aa7.06□□□□□ -1.28
SPG7-207ENST00000563218 KLKP1Q107X0 134 aa7.06□□□□□ -1.28
SPG7-207ENST00000563218 RPL37P61927 97 aaKnown RBP7.05□□□□□ -1.28
SPG7-207ENST00000563218 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
SPG7-207ENST00000563218 NDUFC1O43677 76 aa7.04□□□□□ -1.28
SPG7-207ENST00000563218 C5orf47Q569G3 176 aa7.02□□□□□ -1.29
SPG7-207ENST00000563218 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
SPG7-207ENST00000563218 C20orf166-AS1Q96NR2 134 aa7.02□□□□□ -1.29
SPG7-207ENST00000563218 A8MUU9 505 aa7.01□□□□□ -1.29
SPG7-207ENST00000563218 TRAV22A0A0B4J277 110 aa7□□□□□ -1.29
SPG7-207ENST00000563218 H0Y9P7 68 aa7□□□□□ -1.29
SPG7-207ENST00000563218 MP68P56378 58 aa7□□□□□ -1.29
SPG7-207ENST00000563218 CYSTM1Q9H1C7 97 aa7□□□□□ -1.29
SPG7-207ENST00000563218 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
SPG7-207ENST00000563218 Q75L30 129 aa6.99□□□□□ -1.29
SPG7-207ENST00000563218 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
SPG7-207ENST00000563218 H3BPC8 53 aa6.96□□□□□ -1.3
SPG7-207ENST00000563218 H7BZZ5 65 aa6.96□□□□□ -1.3
SPG7-207ENST00000563218 Q5W150 140 aa6.96□□□□□ -1.3
SPG7-207ENST00000563218 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.3
SPG7-207ENST00000563218 USH2AO75445 5202 aa6.95□□□□□ -1.3
SPG7-207ENST00000563218 LINC00208Q96KT6 92 aa6.95□□□□□ -1.3
SPG7-207ENST00000563218 ATP5EP56381 51 aaPredicted RBP6.94□□□□□ -1.3
SPG7-207ENST00000563218 SNURFQ9Y675 71 aa6.94□□□□□ -1.3
SPG7-207ENST00000563218 FAM236DA0A1B0GTK5 79 aa6.93□□□□□ -1.3
SPG7-207ENST00000563218 FAM236CP0DP71 79 aa6.93□□□□□ -1.3
SPG7-207ENST00000563218 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms