RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 RPS27P42677 84 aaKnown RBP-0.81□□□□□ -2.54
CHD9-207ENST00000562806 RPS27LQ71UM5 84 aaKnown RBP-0.81□□□□□ -2.54
CHD9-207ENST00000562806 NOP10Q9NPE3 64 aaKnown RBP-0.81□□□□□ -2.54
CHD9-207ENST00000562806 EEA1Q15075 1411 aa-0.81□□□□□ -2.54
CHD9-207ENST00000562806 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.81□□□□□ -2.54
CHD9-207ENST00000562806 KIF21BO75037 1637 aa-0.82□□□□□ -2.54
CHD9-207ENST00000562806 USP32Q8NFA0 1604 aa-0.82□□□□□ -2.54
CHD9-207ENST00000562806 LRRC7Q96NW7 1537 aa-0.82□□□□□ -2.54
CHD9-207ENST00000562806 ATOX1O00244 68 aa-0.82□□□□□ -2.54
CHD9-207ENST00000562806 COX7BP24311 80 aa-0.82□□□□□ -2.54
CHD9-207ENST00000562806 ETDBQ3ZM63 59 aa-0.82□□□□□ -2.54
CHD9-207ENST00000562806 UBR1Q8IWV7 1749 aa-0.82□□□□□ -2.54
CHD9-207ENST00000562806 PLIN4Q96Q06 1357 aa-0.83□□□□□ -2.54
CHD9-207ENST00000562806 MAGI3Q5TCQ9 1506 aa-0.83□□□□□ -2.54
CHD9-207ENST00000562806 POLR1AO95602 1720 aaPredicted RBP-0.83□□□□□ -2.54
CHD9-207ENST00000562806 NCOA2Q15596 1464 aa-0.83□□□□□ -2.54
CHD9-207ENST00000562806 M0QY20 66 aa-0.83□□□□□ -2.54
CHD9-207ENST00000562806 ACYP1P07311 99 aa-0.83□□□□□ -2.54
CHD9-207ENST00000562806 S100A10P60903 97 aa-0.83□□□□□ -2.54
CHD9-207ENST00000562806 C14orf144Q96I85 54 aa-0.83□□□□□ -2.54
CHD9-207ENST00000562806 ANKRD36CQ5JPF3 1778 aa-0.83□□□□□ -2.54
CHD9-207ENST00000562806 UBR3Q6ZT12 1888 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 ITSN2Q9NZM3 1697 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 ATP10BO94823 1461 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 TEX14Q8IWB6 1497 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 TMEM131LA2VDJ0 1609 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 TMEM218A2RU14 115 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 D6R8Y8 96 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 H3BUA1 57 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 LEPROTL1O95214 131 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 HMGN3Q15651 99 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 BVES-AS1Q5T3Y7 98 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 MUSTN1Q8IVN3 82 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 AP4S1Q9Y587 144 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 A0A1B0GUL6 1792 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 SUPT6HQ7KZ85 1726 aaKnown RBP-0.84□□□□□ -2.54
CHD9-207ENST00000562806 CLASP1Q7Z460 1538 aa-0.84□□□□□ -2.54
CHD9-207ENST00000562806 CD163L1Q9NR16 1453 aa-0.85□□□□□ -2.55
CHD9-207ENST00000562806 RGPD3A6NKT7 1758 aaPredicted RBP-0.85□□□□□ -2.55
CHD9-207ENST00000562806 RGPD4Q7Z3J3 1758 aa-0.85□□□□□ -2.55
CHD9-207ENST00000562806 MYH4Q9Y623 1939 aa-0.85□□□□□ -2.55
CHD9-207ENST00000562806 CRIP1P50238 77 aa-0.85□□□□□ -2.55
CHD9-207ENST00000562806 SARNPP82979 210 aaKnown RBP-0.85□□□□□ -2.55
CHD9-207ENST00000562806 TTTY10Q9BZA0 68 aa-0.85□□□□□ -2.55
CHD9-207ENST00000562806 PARP4Q9UKK3 1724 aaKnown RBP-0.85□□□□□ -2.55
CHD9-207ENST00000562806 EPRSP07814 1512 aaKnown RBP-0.85□□□□□ -2.55
CHD9-207ENST00000562806 FANCAO15360 1455 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 LRRC9Q6ZRR7 1453 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 ANKRD26Q9UPS8 1709 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 THOC2Q8NI27 1593 aaKnown RBP-0.86□□□□□ -2.55
CHD9-207ENST00000562806 UQCRHLA0A096LP55 91 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 COL5A1-AS1Q5SY13 56 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 ALKAL2Q6UX46 152 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 ZNF720Q7Z2F6 126 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 KIF1AQ12756 1690 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 ZC3H13Q5T200 1668 aaKnown RBP-0.86□□□□□ -2.55
CHD9-207ENST00000562806 MYO3AQ8NEV4 1616 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 ERVK-7P63135 1459 aa-0.86□□□□□ -2.55
CHD9-207ENST00000562806 PEG3Q9GZU2 1588 aa-0.87□□□□□ -2.55
CHD9-207ENST00000562806 CNTLNQ9NXG0 1405 aa-0.87□□□□□ -2.55
CHD9-207ENST00000562806 DEFB131BA0A096LNP1 70 aa-0.87□□□□□ -2.55
CHD9-207ENST00000562806 ATP6V1G2-DDX39BF2Z307 99 aa-0.87□□□□□ -2.55
CHD9-207ENST00000562806 S100PP25815 95 aa-0.87□□□□□ -2.55
CHD9-207ENST00000562806 FAUP35544 74 aaKnown RBP-0.87□□□□□ -2.55
CHD9-207ENST00000562806 NCBP2-AS2Q69YL0 99 aa-0.87□□□□□ -2.55
CHD9-207ENST00000562806 NRXN3Q9Y4C0 1643 aa-0.87□□□□□ -2.55
CHD9-207ENST00000562806 DOT1LQ8TEK3 1739 aa-0.87□□□□□ -2.55
CHD9-207ENST00000562806 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.87□□□□□ -2.55
CHD9-207ENST00000562806 NESP48681 1621 aa-0.88□□□□□ -2.55
CHD9-207ENST00000562806 NRAPQ86VF7 1730 aa-0.88□□□□□ -2.55
CHD9-207ENST00000562806 TRAV21A0A0B4J279 112 aa-0.88□□□□□ -2.55
CHD9-207ENST00000562806 RPL38P63173 70 aaKnown RBP-0.88□□□□□ -2.55
CHD9-207ENST00000562806 NWD1Q149M9 1564 aa-0.88□□□□□ -2.55
CHD9-207ENST00000562806 PLCH1Q4KWH8 1693 aa-0.88□□□□□ -2.55
CHD9-207ENST00000562806 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.89□□□□□ -2.55
CHD9-207ENST00000562806 TJP1Q07157 1748 aa-0.89□□□□□ -2.55
CHD9-207ENST00000562806 LRRIQ1Q96JM4 1722 aa-0.89□□□□□ -2.55
CHD9-207ENST00000562806 HMGA1P17096 107 aaKnown RBP-0.89□□□□□ -2.55
CHD9-207ENST00000562806 MINOS1Q5TGZ0 78 aa-0.89□□□□□ -2.55
CHD9-207ENST00000562806 GAFA1Q96PS6 74 aa-0.89□□□□□ -2.55
CHD9-207ENST00000562806 DPY30Q9C005 99 aa-0.89□□□□□ -2.55
CHD9-207ENST00000562806 DIP2BQ9P265 1576 aa-0.89□□□□□ -2.55
CHD9-207ENST00000562806 NEXMIFQ5QGS0 1516 aa-0.89□□□□□ -2.55
CHD9-207ENST00000562806 CCDC88BA6NC98 1476 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 SFTA3P0C7M3 94 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 LINC00032P0C843 101 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 RBP2P50120 134 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 POLR2KP53803 58 aaKnown RBP-0.9□□□□□ -2.55
CHD9-207ENST00000562806 NCMAPQ5T1S8 102 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 C20orf78Q9BR46 151 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 KCNQ1DNQ9H478 68 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 C6orf48Q9UBA6 75 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 KIAA0586Q9BVV6 1533 aa-0.9□□□□□ -2.55
CHD9-207ENST00000562806 LTN1O94822 1766 aa-0.91□□□□□ -2.55
CHD9-207ENST00000562806 A0A1B0GUT8 65 aa-0.91□□□□□ -2.56
CHD9-207ENST00000562806 IQCF6A8MYZ5 107 aa-0.91□□□□□ -2.56
CHD9-207ENST00000562806 HMGN2P05204 90 aaKnown RBP-0.91□□□□□ -2.56
CHD9-207ENST00000562806 TCEAL7Q9BRU2 100 aa-0.91□□□□□ -2.56
CHD9-207ENST00000562806 RNF17Q9BXT8 1623 aaKnown RBP-0.91□□□□□ -2.56
CHD9-207ENST00000562806 AKAP12Q02952 1782 aa-0.91□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms