RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 TAX1BP3O14907 124 aa2.51□□□□□ -2.01
SMG1-206ENST00000562668 SLC25A20O43772 301 aa2.51□□□□□ -2.01
SMG1-206ENST00000562668 RPS29P62273 56 aaKnown RBP2.51□□□□□ -2.01
SMG1-206ENST00000562668 SPAG11AQ6PDA7 123 aa2.51□□□□□ -2.01
SMG1-206ENST00000562668 PPDPFLQ8WWR9 84 aa2.51□□□□□ -2.01
SMG1-206ENST00000562668 SNHG12Q9BXW3 62 aa2.51□□□□□ -2.01
SMG1-206ENST00000562668 LAMTOR3Q9UHA4 124 aa2.51□□□□□ -2.01
SMG1-206ENST00000562668 MUC2Q02817 5179 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 TCL1BO95988 128 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 SPINK1P00995 79 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 TRACP01848 142 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 CD164Q04900 197 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 OCIAD2Q56VL3 154 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 C9orf153Q5TBE3 101 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 IGFL1Q6UW32 110 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 RETNLBQ9BQ08 111 aa2.5□□□□□ -2.01
SMG1-206ENST00000562668 NAA38Q9BRA0 125 aaKnown RBP2.5□□□□□ -2.01
SMG1-206ENST00000562668 PSMB2P49721 201 aa2.49□□□□□ -2.01
SMG1-206ENST00000562668 Q5XG85 94 aa2.49□□□□□ -2.01
SMG1-206ENST00000562668 H3BUT2 72 aa2.48□□□□□ -2.01
SMG1-206ENST00000562668 COX6CP09669 75 aa2.48□□□□□ -2.01
SMG1-206ENST00000562668 BATFQ16520 125 aa2.48□□□□□ -2.01
SMG1-206ENST00000562668 A0A1W2PNM2 257 aa2.47□□□□□ -2.01
SMG1-206ENST00000562668 A0A1W2PPM0 123 aa2.47□□□□□ -2.01
SMG1-206ENST00000562668 Q6JHZ5 121 aa2.47□□□□□ -2.01
SMG1-206ENST00000562668 Q6Q795 121 aa2.47□□□□□ -2.01
SMG1-206ENST00000562668 HRCT1Q6UXD1 115 aa2.47□□□□□ -2.01
SMG1-206ENST00000562668 FP248Q71RG6 208 aaPredicted RBP2.47□□□□□ -2.01
SMG1-206ENST00000562668 ORMDL1Q9P0S3 153 aa2.47□□□□□ -2.01
SMG1-206ENST00000562668 MUC19Q7Z5P9 8384 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 TRBV7-4A0A0J9YYF1 115 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 TRBV7-7A0A0K0K1E9 115 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 H3BMG7 143 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 TMEM256-PLSCR3K7ERE1 68 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 SCGB1C2P0DMR2 95 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 ATXN8Q156A1 80 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 TPRXLQ17RH7 258 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 ASB16-AS1Q495Z4 193 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 C1orf195Q5TG92 126 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 FAT4Q6V0I7 4981 aa2.46□□□□□ -2.02
SMG1-206ENST00000562668 TRBV20-1A0A075B6N2 111 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 F8WEM9 126 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 H3BQ85 93 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 SNCGO76070 127 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 DNAL4O96015 105 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 BAALC-AS2P0C853 105 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 FABP2P12104 132 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 OBSCN-AS1Q96MR7 158 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 Q96NJ1 140 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 LIMD2Q9BT23 127 aa2.45□□□□□ -2.02
SMG1-206ENST00000562668 PCP4L1A6NKN8 68 aa2.44□□□□□ -2.02
SMG1-206ENST00000562668 COL5A1-AS1Q5SY13 56 aa2.44□□□□□ -2.02
SMG1-206ENST00000562668 TEN1Q86WV5 123 aa2.44□□□□□ -2.02
SMG1-206ENST00000562668 ANKRD29Q8N6D5 301 aa2.44□□□□□ -2.02
SMG1-206ENST00000562668 C9JAW5 83 aa2.43□□□□□ -2.02
SMG1-206ENST00000562668 LYRM7Q5U5X0 104 aa2.43□□□□□ -2.02
SMG1-206ENST00000562668 A0A087WSZ3 146 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 LOC110117498A0A087WWA1 95 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 A0A1B0GV72 72 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 H3BT86 120 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 K7EP34 96 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 RBM3P98179 157 aaKnown RBP2.42□□□□□ -2.02
SMG1-206ENST00000562668 Q6ZQT0 140 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 MTURNQ8N3F0 131 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 LINC00472Q9H8W2 130 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 SPCS1Q9Y6A9 102 aa2.42□□□□□ -2.02
SMG1-206ENST00000562668 JMJD7-PLA2G4BH0Y9G9 81 aa2.41□□□□□ -2.02
SMG1-206ENST00000562668 CCKP06307 115 aa2.41□□□□□ -2.02
SMG1-206ENST00000562668 KRTAP4-1Q9BYQ7 146 aa2.41□□□□□ -2.02
SMG1-206ENST00000562668 C14orf132Q9NPU4 83 aa2.4□□□□□ -2.03
SMG1-206ENST00000562668 SPRR5A0A1B0GTR4 108 aa2.39□□□□□ -2.03
SMG1-206ENST00000562668 C9orf92A6NGG3 77 aa2.39□□□□□ -2.03
SMG1-206ENST00000562668 DSCR8Q96T75 97 aa2.39□□□□□ -2.03
SMG1-206ENST00000562668 SS18L2Q9UHA2 77 aa2.39□□□□□ -2.03
SMG1-206ENST00000562668 A0A1B0GW54 56 aa2.38□□□□□ -2.03
SMG1-206ENST00000562668 PDE6GP18545 87 aa2.38□□□□□ -2.03
SMG1-206ENST00000562668 RPL37P61927 97 aaKnown RBP2.37□□□□□ -2.03
SMG1-206ENST00000562668 DEFB116Q30KQ4 102 aa2.37□□□□□ -2.03
SMG1-206ENST00000562668 VPS25Q9BRG1 176 aa2.37□□□□□ -2.03
SMG1-206ENST00000562668 F8W1H4 67 aa2.36□□□□□ -2.03
SMG1-206ENST00000562668 IGKV4-1P06312 121 aa2.36□□□□□ -2.03
SMG1-206ENST00000562668 KRTAP19-2Q3LHN2 52 aa2.36□□□□□ -2.03
SMG1-206ENST00000562668 GTF2H5Q6ZYL4 71 aa2.36□□□□□ -2.03
SMG1-206ENST00000562668 C20orf166-AS1Q96NR2 134 aa2.36□□□□□ -2.03
SMG1-206ENST00000562668 A0A1B0GV90 55 aa2.35□□□□□ -2.03
SMG1-206ENST00000562668 A8MUU9 505 aa2.35□□□□□ -2.03
SMG1-206ENST00000562668 IGKV3D-7A0A0C4DH55 119 aa2.34□□□□□ -2.03
SMG1-206ENST00000562668 A0A1B0GVX0 72 aa2.34□□□□□ -2.03
SMG1-206ENST00000562668 J3KT08 172 aa2.34□□□□□ -2.03
SMG1-206ENST00000562668 ETDBQ3ZM63 59 aa2.34□□□□□ -2.03
SMG1-206ENST00000562668 PCOTHQ58A44 107 aa2.34□□□□□ -2.03
SMG1-206ENST00000562668 SIGMAR1Q99720 223 aa2.34□□□□□ -2.03
SMG1-206ENST00000562668 FLGP20930 4061 aaPredicted RBP2.33□□□□□ -2.04
SMG1-206ENST00000562668 A8MWP4 228 aa2.33□□□□□ -2.04
SMG1-206ENST00000562668 LINC00846Q9NV44 126 aa2.33□□□□□ -2.04
SMG1-206ENST00000562668 IGHV6-1A0A0B4J1U7 121 aa2.32□□□□□ -2.04
SMG1-206ENST00000562668 MMP24-AS1A0A0U1RRL7 71 aa2.32□□□□□ -2.04
SMG1-206ENST00000562668 C8orf87E5RJ46 101 aa2.32□□□□□ -2.04
SMG1-206ENST00000562668 LINC00313P59037 77 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 370.9 ms