RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
PKD1-225ENST00000562297 RYR1P21817 5038 aa9.63□□□□□ -0.87
PKD1-225ENST00000562297 WFDC13Q8IUB5 93 aa9.6□□□□□ -0.87
PKD1-225ENST00000562297 SMIM26A0A096LP01 95 aa9.59□□□□□ -0.87
PKD1-225ENST00000562297 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.87
PKD1-225ENST00000562297 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
PKD1-225ENST00000562297 NDUFB1O75438 58 aa9.56□□□□□ -0.88
PKD1-225ENST00000562297 TYMSOSQ8TAI1 123 aa9.55□□□□□ -0.88
PKD1-225ENST00000562297 EPPK1P58107 5090 aaKnown RBP9.55□□□□□ -0.88
PKD1-225ENST00000562297 MMP24-AS1A0A0U1RRL7 71 aa9.55□□□□□ -0.88
PKD1-225ENST00000562297 PRR26Q8N8Z3 221 aa9.54□□□□□ -0.88
PKD1-225ENST00000562297 A0A1B0GVX0 72 aa9.53□□□□□ -0.88
PKD1-225ENST00000562297 CASC2Q6XLA1 102 aa9.53□□□□□ -0.88
PKD1-225ENST00000562297 CDK2AP2O75956 126 aa9.52□□□□□ -0.89
PKD1-225ENST00000562297 KIAA1109Q2LD37 5005 aa9.52□□□□□ -0.89
PKD1-225ENST00000562297 IGHV6-1A0A0B4J1U7 121 aa9.49□□□□□ -0.89
PKD1-225ENST00000562297 C1orf195Q5TG92 126 aa9.49□□□□□ -0.89
PKD1-225ENST00000562297 C8orf17Q9NRJ1 99 aa9.49□□□□□ -0.89
PKD1-225ENST00000562297 FP248Q71RG6 208 aaPredicted RBP9.48□□□□□ -0.89
PKD1-225ENST00000562297 ZCCHC13Q8WW36 166 aaKnown RBP9.48□□□□□ -0.89
PKD1-225ENST00000562297 NOTCH2NLQ7Z3S9 236 aa9.48□□□□□ -0.89
PKD1-225ENST00000562297 LRP1Q07954 4544 aaKnown RBP9.48□□□□□ -0.89
PKD1-225ENST00000562297 hDV103S1A0JD37 113 aa9.47□□□□□ -0.89
PKD1-225ENST00000562297 SPINK1P00995 79 aa9.47□□□□□ -0.89
PKD1-225ENST00000562297 PRO0628Q9UI54 55 aa9.47□□□□□ -0.89
PKD1-225ENST00000562297 FAM229AH3BQW9 127 aa9.46□□□□□ -0.89
PKD1-225ENST00000562297 LIMD2Q9BT23 127 aa9.46□□□□□ -0.89
PKD1-225ENST00000562297 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
PKD1-225ENST00000562297 TNXBP22105 4242 aa9.45□□□□□ -0.9
PKD1-225ENST00000562297 LINC00304Q8N9R0 145 aa9.44□□□□□ -0.9
PKD1-225ENST00000562297 KRTAP17-1Q9BYP8 105 aa9.43□□□□□ -0.9
PKD1-225ENST00000562297 Q5VSD8 79 aa9.43□□□□□ -0.9
PKD1-225ENST00000562297 RPS29P62273 56 aaKnown RBP9.42□□□□□ -0.9
PKD1-225ENST00000562297 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
PKD1-225ENST00000562297 SPAG11AQ6PDA7 123 aa9.41□□□□□ -0.9
PKD1-225ENST00000562297 MP68P56378 58 aa9.39□□□□□ -0.91
PKD1-225ENST00000562297 H0Y9P7 68 aa9.38□□□□□ -0.91
PKD1-225ENST00000562297 LINC00208Q96KT6 92 aa9.38□□□□□ -0.91
PKD1-225ENST00000562297 MRPL34Q9BQ48 92 aaKnown RBP9.38□□□□□ -0.91
PKD1-225ENST00000562297 C8orf87E5RJ46 101 aa9.36□□□□□ -0.91
PKD1-225ENST00000562297 TRAV22A0A0B4J277 110 aa9.34□□□□□ -0.91
PKD1-225ENST00000562297 FLG2Q5D862 2391 aaPredicted RBP9.33□□□□□ -0.92
PKD1-225ENST00000562297 MYCBP2O75592 4640 aa9.33□□□□□ -0.92
PKD1-225ENST00000562297 PRR4Q16378 134 aa9.32□□□□□ -0.92
PKD1-225ENST00000562297 LINC00313P59037 77 aa9.32□□□□□ -0.92
PKD1-225ENST00000562297 TP53AIP1Q9HCN2 124 aa9.32□□□□□ -0.92
PKD1-225ENST00000562297 MPLKIPQ8TAP9 179 aa9.3□□□□□ -0.92
PKD1-225ENST00000562297 BIRC6Q9NR09 4857 aa9.29□□□□□ -0.92
PKD1-225ENST00000562297 H3BPC8 53 aa9.29□□□□□ -0.92
PKD1-225ENST00000562297 C1orf64Q8NEQ6 169 aa9.29□□□□□ -0.92
PKD1-225ENST00000562297 KRTAP16-1A8MUX0 517 aa9.28□□□□□ -0.92
PKD1-225ENST00000562297 NDUFS5O43920 106 aa9.28□□□□□ -0.92
PKD1-225ENST00000562297 KRTAP10-8P60410 259 aa9.28□□□□□ -0.92
PKD1-225ENST00000562297 Q8N1X5 172 aa9.27□□□□□ -0.92
PKD1-225ENST00000562297 BRK1Q8WUW1 75 aa9.27□□□□□ -0.92
PKD1-225ENST00000562297 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
PKD1-225ENST00000562297 CYP4F30PQ9H0H9 118 aa9.25□□□□□ -0.93
PKD1-225ENST00000562297 KRTAP13-3Q3SY46 172 aa9.22□□□□□ -0.93
PKD1-225ENST00000562297 Q5W150 140 aa9.21□□□□□ -0.93
PKD1-225ENST00000562297 Q1T7F1 81 aa9.2□□□□□ -0.94
PKD1-225ENST00000562297 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
PKD1-225ENST00000562297 SPANXA2-OT1Q8N9U9 137 aa9.18□□□□□ -0.94
PKD1-225ENST00000562297 RETNLBQ9BQ08 111 aa9.17□□□□□ -0.94
PKD1-225ENST00000562297 PCOTHQ58A44 107 aa9.17□□□□□ -0.94
PKD1-225ENST00000562297 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
PKD1-225ENST00000562297 V9GYY9 64 aa9.12□□□□□ -0.95
PKD1-225ENST00000562297 KRTAP4-5Q9BYR2 181 aa9.09□□□□□ -0.95
PKD1-225ENST00000562297 IGLV7-46A0A075B6I9 117 aa9.09□□□□□ -0.95
PKD1-225ENST00000562297 LOC101927531A0A1B0GV80 90 aa9.07□□□□□ -0.96
PKD1-225ENST00000562297 C9orf92A6NGG3 77 aa9.07□□□□□ -0.96
PKD1-225ENST00000562297 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
PKD1-225ENST00000562297 HERC2O95714 4834 aa9.05□□□□□ -0.96
PKD1-225ENST00000562297 C20orf166-AS1Q96NR2 134 aa9.04□□□□□ -0.96
PKD1-225ENST00000562297 A8MUU9 505 aa9.02□□□□□ -0.97
PKD1-225ENST00000562297 PSPHP1O15172 72 aa9.02□□□□□ -0.97
PKD1-225ENST00000562297 COA5Q86WW8 74 aa9.01□□□□□ -0.97
PKD1-225ENST00000562297 IGKV2-30P06310 120 aa9□□□□□ -0.97
PKD1-225ENST00000562297 A8MUN3 132 aa8.95□□□□□ -0.98
PKD1-225ENST00000562297 HRES1P13985 223 aa8.92□□□□□ -0.98
PKD1-225ENST00000562297 Q5VV11 94 aa8.92□□□□□ -0.98
PKD1-225ENST00000562297 Q75L30 129 aa8.92□□□□□ -0.98
PKD1-225ENST00000562297 IGKV2D-30A0A075B6S6 120 aa8.9□□□□□ -0.98
PKD1-225ENST00000562297 PMAIP1Q13794 54 aa8.9□□□□□ -0.98
PKD1-225ENST00000562297 PCLOQ9Y6V0 5065 aa8.9□□□□□ -0.98
PKD1-225ENST00000562297 CHKB-CPT1BH3BT56 60 aa8.85□□□□□ -0.99
PKD1-225ENST00000562297 PRR15LQ9BU68 103 aa8.85□□□□□ -0.99
PKD1-225ENST00000562297 C7orf65Q6ZTY9 151 aa8.84□□□□□ -0.99
PKD1-225ENST00000562297 XP32Q5T750 250 aa8.83□□□□□ -1
PKD1-225ENST00000562297 SEC61GP60059 68 aa8.82□□□□□ -1
PKD1-225ENST00000562297 LRP2P98164 4655 aa8.8□□□□□ -1
PKD1-225ENST00000562297 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
PKD1-225ENST00000562297 DMAC1Q96GE9 116 aa8.79□□□□□ -1
PKD1-225ENST00000562297 LPAP08519 4548 aa8.79□□□□□ -1
PKD1-225ENST00000562297 ACYP2P14621 99 aa8.77□□□□□ -1.01
PKD1-225ENST00000562297 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
PKD1-225ENST00000562297 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
PKD1-225ENST00000562297 SPINK7P58062 85 aa8.75□□□□□ -1.01
PKD1-225ENST00000562297 A6NED7 52 aa8.74□□□□□ -1.01
PKD1-225ENST00000562297 ATP11AUNQ6ZP68 121 aa8.74□□□□□ -1.01
PKD1-225ENST00000562297 A8MU10 97 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms