RNA–Protein interactions for RNA: ENST00000562271.1

LINC01225-201, Transcript of LINC01225 pseudogene, humanhuman

Gene LINC01225, Length 2,270 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01225-201ENST00000562271 PRR4Q16378 134 aa10.58□□□□□ -0.72
LINC01225-201ENST00000562271 Q8N9P0 234 aaPredicted RBP10.58□□□□□ -0.72
LINC01225-201ENST00000562271 NDUFS5O43920 106 aa10.58□□□□□ -0.72
LINC01225-201ENST00000562271 MP68P56378 58 aa10.58□□□□□ -0.72
LINC01225-201ENST00000562271 RBM12B-AS1Q9P1G2 102 aa10.58□□□□□ -0.72
LINC01225-201ENST00000562271 A8MU10 97 aa10.57□□□□□ -0.72
LINC01225-201ENST00000562271 KRTAP29-1A8MX34 341 aaPredicted RBP10.57□□□□□ -0.72
LINC01225-201ENST00000562271 CHKB-CPT1BH3BT56 60 aa10.57□□□□□ -0.72
LINC01225-201ENST00000562271 LINC00472Q9H8W2 130 aa10.56□□□□□ -0.72
LINC01225-201ENST00000562271 A8MWP4 228 aa10.55□□□□□ -0.72
LINC01225-201ENST00000562271 CASC2Q6XLA1 102 aa10.54□□□□□ -0.72
LINC01225-201ENST00000562271 VPS13BQ7Z7G8 4022 aa10.54□□□□□ -0.72
LINC01225-201ENST00000562271 H3BPC8 53 aa10.54□□□□□ -0.72
LINC01225-201ENST00000562271 KRTAP13-1Q8IUC0 172 aa10.54□□□□□ -0.72
LINC01225-201ENST00000562271 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
LINC01225-201ENST00000562271 LINC00208Q96KT6 92 aa10.54□□□□□ -0.72
LINC01225-201ENST00000562271 Q75L30 129 aa10.53□□□□□ -0.72
LINC01225-201ENST00000562271 CIRBP-AS1Q8TBR5 109 aa10.5□□□□□ -0.73
LINC01225-201ENST00000562271 LOC101927531A0A1B0GV80 90 aa10.5□□□□□ -0.73
LINC01225-201ENST00000562271 PRR15LQ9BU68 103 aa10.49□□□□□ -0.73
LINC01225-201ENST00000562271 HSPG2P98160 4391 aa10.49□□□□□ -0.73
LINC01225-201ENST00000562271 A6NN06 94 aa10.49□□□□□ -0.73
LINC01225-201ENST00000562271 LCA10Q71F78 164 aa10.47□□□□□ -0.73
LINC01225-201ENST00000562271 H0Y9P7 68 aa10.46□□□□□ -0.73
LINC01225-201ENST00000562271 SMR3BP02814 79 aaPredicted RBP10.46□□□□□ -0.74
LINC01225-201ENST00000562271 SPTSSBQ8NFR3 76 aa10.46□□□□□ -0.74
LINC01225-201ENST00000562271 KRTAP17-1Q9BYP8 105 aa10.45□□□□□ -0.74
LINC01225-201ENST00000562271 Q6ZSA8 131 aa10.44□□□□□ -0.74
LINC01225-201ENST00000562271 RYR1P21817 5038 aa10.44□□□□□ -0.74
LINC01225-201ENST00000562271 IGLV9-49A0A0B4J1Y8 123 aa10.44□□□□□ -0.74
LINC01225-201ENST00000562271 CDC42SE1Q9NRR8 79 aa10.43□□□□□ -0.74
LINC01225-201ENST00000562271 MMP24-AS1A0A0U1RRL7 71 aa10.42□□□□□ -0.74
LINC01225-201ENST00000562271 A6NED7 52 aa10.42□□□□□ -0.74
LINC01225-201ENST00000562271 LINC00483Q53H64 154 aa10.4□□□□□ -0.74
LINC01225-201ENST00000562271 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
LINC01225-201ENST00000562271 PLAC8Q9NZF1 115 aa10.39□□□□□ -0.75
LINC01225-201ENST00000562271 Q96NJ1 140 aa10.38□□□□□ -0.75
LINC01225-201ENST00000562271 ZNF706Q9Y5V0 76 aaPredicted RBP10.37□□□□□ -0.75
LINC01225-201ENST00000562271 COA5Q86WW8 74 aa10.34□□□□□ -0.75
LINC01225-201ENST00000562271 PSORS1C2Q9UIG4 136 aa10.34□□□□□ -0.75
LINC01225-201ENST00000562271 MOBPQ13875 183 aa10.33□□□□□ -0.76
LINC01225-201ENST00000562271 IGLV7-46A0A075B6I9 117 aa10.32□□□□□ -0.76
LINC01225-201ENST00000562271 ASB16-AS1Q495Z4 193 aa10.32□□□□□ -0.76
LINC01225-201ENST00000562271 LINC01558Q9Y6Z2 57 aa10.31□□□□□ -0.76
LINC01225-201ENST00000562271 TP53AIP1Q9HCN2 124 aa10.31□□□□□ -0.76
LINC01225-201ENST00000562271 C8orf17Q9NRJ1 99 aa10.3□□□□□ -0.76
LINC01225-201ENST00000562271 ZNF861PO60384 105 aa10.29□□□□□ -0.76
LINC01225-201ENST00000562271 BIRC6Q9NR09 4857 aa10.28□□□□□ -0.76
LINC01225-201ENST00000562271 A0A1B0GVX0 72 aa10.27□□□□□ -0.77
LINC01225-201ENST00000562271 ANAPC11Q9NYG5 84 aa10.27□□□□□ -0.77
LINC01225-201ENST00000562271 IGHV6-1A0A0B4J1U7 121 aa10.26□□□□□ -0.77
LINC01225-201ENST00000562271 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
LINC01225-201ENST00000562271 FLG2Q5D862 2391 aaPredicted RBP10.24□□□□□ -0.77
LINC01225-201ENST00000562271 LRP1Q07954 4544 aaKnown RBP10.23□□□□□ -0.77
LINC01225-201ENST00000562271 MYCBP2O75592 4640 aa10.21□□□□□ -0.78
LINC01225-201ENST00000562271 PCOTHQ58A44 107 aa10.19□□□□□ -0.78
LINC01225-201ENST00000562271 C4orf48Q5BLP8 95 aa10.19□□□□□ -0.78
LINC01225-201ENST00000562271 MRPL34Q9BQ48 92 aaKnown RBP10.19□□□□□ -0.78
LINC01225-201ENST00000562271 C8orf87E5RJ46 101 aa10.18□□□□□ -0.78
LINC01225-201ENST00000562271 KRTAP10-4P60372 401 aaPredicted RBP10.17□□□□□ -0.78
LINC01225-201ENST00000562271 KRTAP4-5Q9BYR2 181 aa10.17□□□□□ -0.78
LINC01225-201ENST00000562271 ABCA13Q86UQ4 5058 aa10.16□□□□□ -0.78
LINC01225-201ENST00000562271 SPAG11AQ6PDA7 123 aa10.16□□□□□ -0.78
LINC01225-201ENST00000562271 IGLV7-43P04211 117 aa10.16□□□□□ -0.78
LINC01225-201ENST00000562271 A0A087X002 238 aa10.15□□□□□ -0.78
LINC01225-201ENST00000562271 NOTCH2NLQ7Z3S9 236 aa10.15□□□□□ -0.78
LINC01225-201ENST00000562271 SPINK7P58062 85 aa10.13□□□□□ -0.79
LINC01225-201ENST00000562271 PKHD1L1Q86WI1 4243 aa10.12□□□□□ -0.79
LINC01225-201ENST00000562271 SPINK6Q6UWN8 80 aa10.11□□□□□ -0.79
LINC01225-201ENST00000562271 Q5VSD8 79 aa10.1□□□□□ -0.79
LINC01225-201ENST00000562271 HERC2O95714 4834 aa10.09□□□□□ -0.79
LINC01225-201ENST00000562271 LINC00313P59037 77 aa10.06□□□□□ -0.8
LINC01225-201ENST00000562271 SSBP3-AS1Q7Z2R9 100 aa10.05□□□□□ -0.8
LINC01225-201ENST00000562271 HRES1P13985 223 aa10.05□□□□□ -0.8
LINC01225-201ENST00000562271 PLA2G1BP04054 148 aaKnown RBP10.02□□□□□ -0.81
LINC01225-201ENST00000562271 PCLOQ9Y6V0 5065 aa10.01□□□□□ -0.81
LINC01225-201ENST00000562271 Q5W150 140 aa10□□□□□ -0.81
LINC01225-201ENST00000562271 KRTAP13-3Q3SY46 172 aa9.99□□□□□ -0.81
LINC01225-201ENST00000562271 FAM229AH3BQW9 127 aa9.99□□□□□ -0.81
LINC01225-201ENST00000562271 FAT3Q8TDW7 4589 aa9.99□□□□□ -0.81
LINC01225-201ENST00000562271 KRTAP1-4P0C5Y4 121 aa9.98□□□□□ -0.81
LINC01225-201ENST00000562271 Q8N1X5 172 aa9.98□□□□□ -0.81
LINC01225-201ENST00000562271 LINC01554Q52M75 96 aa9.97□□□□□ -0.81
LINC01225-201ENST00000562271 TNXBP22105 4242 aa9.94□□□□□ -0.82
LINC01225-201ENST00000562271 PRAC1Q96KF2 57 aa9.93□□□□□ -0.82
LINC01225-201ENST00000562271 KRTAP13-2Q52LG2 175 aa9.91□□□□□ -0.82
LINC01225-201ENST00000562271 PRR26Q8N8Z3 221 aa9.91□□□□□ -0.82
LINC01225-201ENST00000562271 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
LINC01225-201ENST00000562271 H3BS24 57 aa9.85□□□□□ -0.83
LINC01225-201ENST00000562271 ACYP2P14621 99 aa9.85□□□□□ -0.83
LINC01225-201ENST00000562271 ADM2Q7Z4H4 148 aa9.84□□□□□ -0.83
LINC01225-201ENST00000562271 SPATA8Q6RVD6 105 aa9.83□□□□□ -0.84
LINC01225-201ENST00000562271 DMAC1Q96GE9 116 aa9.8□□□□□ -0.84
LINC01225-201ENST00000562271 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
LINC01225-201ENST00000562271 IGKV2-30P06310 120 aa9.77□□□□□ -0.84
LINC01225-201ENST00000562271 KRTAP16-1A8MUX0 517 aa9.77□□□□□ -0.85
LINC01225-201ENST00000562271 A0A1B0GU69 56 aa9.74□□□□□ -0.85
LINC01225-201ENST00000562271 TYMSOSQ8TAI1 123 aa9.73□□□□□ -0.85
LINC01225-201ENST00000562271 HERC1Q15751 4861 aa9.71□□□□□ -0.85
LINC01225-201ENST00000562271 MT1HL1P0DM35 61 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms