RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 C18orf32Q8TCD1 76 aa2.46□□□□□ -2.02
UBR1-203ENST00000562173 TTTY13Q9BZ97 58 aa2.46□□□□□ -2.02
UBR1-203ENST00000562173 TRBV10-2A0A0K0K1G8 114 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 A6NN06 94 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 A8MWP4 228 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 K7EMI3 77 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 HBDP02042 147 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 CLLU1Q5K131 121 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 C10orf91Q5T1B1 145 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 SMCO4Q9NRQ5 59 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 LINC00846Q9NV44 126 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
UBR1-203ENST00000562173 LINC00587B1AMM8 73 aa2.44□□□□□ -2.02
UBR1-203ENST00000562173 KRTAP5-8O75690 187 aa2.44□□□□□ -2.02
UBR1-203ENST00000562173 NDUFC2O95298 119 aa2.44□□□□□ -2.02
UBR1-203ENST00000562173 AKR1D1P51857 326 aa2.44□□□□□ -2.02
UBR1-203ENST00000562173 PEA15Q15121 130 aa2.44□□□□□ -2.02
UBR1-203ENST00000562173 TRBV20-1A0A075B6N2 111 aa2.43□□□□□ -2.02
UBR1-203ENST00000562173 COX7BP24311 80 aa2.43□□□□□ -2.02
UBR1-203ENST00000562173 ELOF1P60002 83 aaKnown RBP2.43□□□□□ -2.02
UBR1-203ENST00000562173 SS18L2Q9UHA2 77 aa2.43□□□□□ -2.02
UBR1-203ENST00000562173 IGLV5-48A0A075B6I7 105 aa2.42□□□□□ -2.02
UBR1-203ENST00000562173 TRBV7-7A0A0K0K1E9 115 aa2.42□□□□□ -2.02
UBR1-203ENST00000562173 TEX49A0A1B0GTD5 131 aa2.42□□□□□ -2.02
UBR1-203ENST00000562173 A6NED7 52 aa2.42□□□□□ -2.02
UBR1-203ENST00000562173 H3BUT2 72 aa2.42□□□□□ -2.02
UBR1-203ENST00000562173 SVBPQ8N300 66 aa2.42□□□□□ -2.02
UBR1-203ENST00000562173 MYMXA0A1B0GTQ4 84 aa2.41□□□□□ -2.02
UBR1-203ENST00000562173 LEPROTO15243 131 aa2.41□□□□□ -2.02
UBR1-203ENST00000562173 APOC3P02656 99 aa2.41□□□□□ -2.02
UBR1-203ENST00000562173 MT-ND4LP03901 98 aa2.41□□□□□ -2.02
UBR1-203ENST00000562173 RHEBQ15382 184 aa2.41□□□□□ -2.02
UBR1-203ENST00000562173 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
UBR1-203ENST00000562173 KRTAP2-1Q9BYU5 128 aa2.41□□□□□ -2.02
UBR1-203ENST00000562173 H3BQ85 93 aa2.4□□□□□ -2.03
UBR1-203ENST00000562173 J3QQQ9 107 aa2.4□□□□□ -2.03
UBR1-203ENST00000562173 ADM2Q7Z4H4 148 aa2.4□□□□□ -2.03
UBR1-203ENST00000562173 LINC00308Q8TCZ7 52 aa2.4□□□□□ -2.03
UBR1-203ENST00000562173 IFI27L1Q96BM0 104 aa2.4□□□□□ -2.03
UBR1-203ENST00000562173 C12orf57Q99622 126 aa2.4□□□□□ -2.03
UBR1-203ENST00000562173 IMUPQ9GZP8 106 aa2.4□□□□□ -2.03
UBR1-203ENST00000562173 SPANXCQ9NY87 97 aa2.4□□□□□ -2.03
UBR1-203ENST00000562173 TCL1BO95988 128 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST1H2BOP23527 126 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST1H2BBP33778 126 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST1H2BDP58876 126 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST1H4AP62805 103 aaKnown RBP2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST1H2BCP62807 126 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST2H2BEQ16778 126 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST1H2BHQ93079 126 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST1H2BNQ99877 126 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 HIST1H2BMQ99879 126 aa2.39□□□□□ -2.03
UBR1-203ENST00000562173 TRAV12-1A0A0B4J245 112 aa2.38□□□□□ -2.03
UBR1-203ENST00000562173 A0A0B4J2C4 111 aa2.38□□□□□ -2.03
UBR1-203ENST00000562173 A0A1B0GV90 55 aa2.38□□□□□ -2.03
UBR1-203ENST00000562173 LYRM7Q5U5X0 104 aa2.38□□□□□ -2.03
UBR1-203ENST00000562173 MIEN1Q9BRT3 115 aa2.38□□□□□ -2.03
UBR1-203ENST00000562173 TMEM218A2RU14 115 aa2.37□□□□□ -2.03
UBR1-203ENST00000562173 S100PP25815 95 aa2.37□□□□□ -2.03
UBR1-203ENST00000562173 SEC11CQ9BY50 192 aa2.37□□□□□ -2.03
UBR1-203ENST00000562173 SMIM6P0DI80 62 aa2.36□□□□□ -2.03
UBR1-203ENST00000562173 SPRR2DP22532 72 aa2.36□□□□□ -2.03
UBR1-203ENST00000562173 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
UBR1-203ENST00000562173 SFTA2Q6UW10 78 aa2.36□□□□□ -2.03
UBR1-203ENST00000562173 FABP4P15090 132 aa2.35□□□□□ -2.03
UBR1-203ENST00000562173 LCA10Q71F78 164 aa2.35□□□□□ -2.03
UBR1-203ENST00000562173 HINT1P49773 126 aaPredicted RBP2.34□□□□□ -2.03
UBR1-203ENST00000562173 RPS28P62857 69 aaKnown RBP2.34□□□□□ -2.03
UBR1-203ENST00000562173 KRTAP19-8Q3LI54 63 aa2.34□□□□□ -2.03
UBR1-203ENST00000562173 Q6ZQY7 126 aa2.34□□□□□ -2.03
UBR1-203ENST00000562173 KTN1-AS1Q86SY8 53 aa2.34□□□□□ -2.03
UBR1-203ENST00000562173 SMIM11BQ8TCY0 68 aa2.34□□□□□ -2.03
UBR1-203ENST00000562173 CLEC2BQ92478 149 aa2.34□□□□□ -2.03
UBR1-203ENST00000562173 SPANXDQ9BXN6 97 aa2.34□□□□□ -2.03
UBR1-203ENST00000562173 A0A087WSZ3 146 aa2.33□□□□□ -2.04
UBR1-203ENST00000562173 A0A1B0GU33 70 aa2.33□□□□□ -2.04
UBR1-203ENST00000562173 A0A1W2PNM2 257 aa2.33□□□□□ -2.04
UBR1-203ENST00000562173 OCIAD2Q56VL3 154 aa2.33□□□□□ -2.04
UBR1-203ENST00000562173 WFDC13Q8IUB5 93 aa2.33□□□□□ -2.04
UBR1-203ENST00000562173 C14orf144Q96I85 54 aa2.33□□□□□ -2.04
UBR1-203ENST00000562173 LINC01549A6NIU2 74 aa2.32□□□□□ -2.04
UBR1-203ENST00000562173 DLEU1O43261 78 aa2.32□□□□□ -2.04
UBR1-203ENST00000562173 SPINK7P58062 85 aa2.32□□□□□ -2.04
UBR1-203ENST00000562173 RBM3P98179 157 aaKnown RBP2.32□□□□□ -2.04
UBR1-203ENST00000562173 A0A1B0GX51 115 aa2.31□□□□□ -2.04
UBR1-203ENST00000562173 H3BPC8 53 aa2.31□□□□□ -2.04
UBR1-203ENST00000562173 DPM2O94777 84 aa2.31□□□□□ -2.04
UBR1-203ENST00000562173 IGKCP01834 107 aa2.31□□□□□ -2.04
UBR1-203ENST00000562173 IGKV4-1P06312 121 aa2.3□□□□□ -2.04
UBR1-203ENST00000562173 LINC01554Q52M75 96 aa2.3□□□□□ -2.04
UBR1-203ENST00000562173 Q5VV11 94 aa2.3□□□□□ -2.04
UBR1-203ENST00000562173 LINC00575Q6W349 94 aa2.3□□□□□ -2.04
UBR1-203ENST00000562173 C2orf91Q6ZV80 131 aa2.3□□□□□ -2.04
UBR1-203ENST00000562173 MUSTN1Q8IVN3 82 aa2.3□□□□□ -2.04
UBR1-203ENST00000562173 ZNF815PA8K554 130 aa2.29□□□□□ -2.04
UBR1-203ENST00000562173 F8WEM9 126 aa2.29□□□□□ -2.04
UBR1-203ENST00000562173 J3KT08 172 aa2.29□□□□□ -2.04
UBR1-203ENST00000562173 TAX1BP3O14907 124 aa2.29□□□□□ -2.04
UBR1-203ENST00000562173 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms