RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 C6orf48Q9UBA6 75 aa5.04□□□□□ -1.6
PALB2-202ENST00000561514 UNQ6190/PRO20217Q6UXQ8 127 aa5.03□□□□□ -1.6
PALB2-202ENST00000561514 Q6ZQT0 140 aa5.03□□□□□ -1.6
PALB2-202ENST00000561514 FAT4Q6V0I7 4981 aa5.02□□□□□ -1.61
PALB2-202ENST00000561514 A0A1B0GW54 56 aa5.02□□□□□ -1.61
PALB2-202ENST00000561514 A6NN06 94 aa5.02□□□□□ -1.61
PALB2-202ENST00000561514 OCR1Q9BZK8 76 aa5.02□□□□□ -1.61
PALB2-202ENST00000561514 MUC17Q685J3 4493 aa5.01□□□□□ -1.61
PALB2-202ENST00000561514 LINC00242Q5T6M2 205 aa5.01□□□□□ -1.61
PALB2-202ENST00000561514 C9orf129Q5T035 196 aaKnown RBP5□□□□□ -1.61
PALB2-202ENST00000561514 Q75L30 129 aa5□□□□□ -1.61
PALB2-202ENST00000561514 LINC00337Q8N6G1 96 aa5□□□□□ -1.61
PALB2-202ENST00000561514 CDC42SE1Q9NRR8 79 aa5□□□□□ -1.61
PALB2-202ENST00000561514 CDKN2A-AS1Q9UH64 79 aa5□□□□□ -1.61
PALB2-202ENST00000561514 A8MUN3 132 aa4.99□□□□□ -1.61
PALB2-202ENST00000561514 SMIM1B2RUZ4 78 aa4.99□□□□□ -1.61
PALB2-202ENST00000561514 C1orf64Q8NEQ6 169 aa4.99□□□□□ -1.61
PALB2-202ENST00000561514 ZNF861PO60384 105 aa4.98□□□□□ -1.61
PALB2-202ENST00000561514 Q5VV11 94 aa4.98□□□□□ -1.61
PALB2-202ENST00000561514 Q9BRP9 147 aa4.98□□□□□ -1.61
PALB2-202ENST00000561514 IGKV2-28A0A075B6P5 120 aa4.97□□□□□ -1.61
PALB2-202ENST00000561514 LOC101927531A0A1B0GV80 90 aa4.97□□□□□ -1.61
PALB2-202ENST00000561514 HCG22E2RYF7 251 aa4.97□□□□□ -1.61
PALB2-202ENST00000561514 IGKV2D-28P01615 120 aa4.97□□□□□ -1.61
PALB2-202ENST00000561514 SPANXA2-OT1Q8N9U9 137 aa4.97□□□□□ -1.61
PALB2-202ENST00000561514 CHKB-CPT1BH3BT56 60 aa4.96□□□□□ -1.62
PALB2-202ENST00000561514 PSPHP1O15172 72 aa4.96□□□□□ -1.62
PALB2-202ENST00000561514 PRR4Q16378 134 aa4.96□□□□□ -1.62
PALB2-202ENST00000561514 Q8IZM0 81 aa4.96□□□□□ -1.62
PALB2-202ENST00000561514 ZCCHC13Q8WW36 166 aaKnown RBP4.95□□□□□ -1.62
PALB2-202ENST00000561514 KRTAP9-2Q9BYQ4 174 aa4.95□□□□□ -1.62
PALB2-202ENST00000561514 H3BPC8 53 aa4.94□□□□□ -1.62
PALB2-202ENST00000561514 LINC01554Q52M75 96 aa4.93□□□□□ -1.62
PALB2-202ENST00000561514 KRTAP13-1Q8IUC0 172 aa4.93□□□□□ -1.62
PALB2-202ENST00000561514 SPTSSBQ8NFR3 76 aa4.93□□□□□ -1.62
PALB2-202ENST00000561514 COX7B2Q8TF08 81 aa4.93□□□□□ -1.62
PALB2-202ENST00000561514 COX7BP24311 80 aa4.92□□□□□ -1.62
PALB2-202ENST00000561514 MP68P56378 58 aa4.92□□□□□ -1.62
PALB2-202ENST00000561514 LINC00158P58513 81 aa4.92□□□□□ -1.62
PALB2-202ENST00000561514 IGLV5-37A0A075B6J1 123 aa4.91□□□□□ -1.62
PALB2-202ENST00000561514 A6NED7 52 aa4.91□□□□□ -1.62
PALB2-202ENST00000561514 COX17Q14061 63 aa4.91□□□□□ -1.62
PALB2-202ENST00000561514 CASC2Q6XLA1 102 aa4.91□□□□□ -1.62
PALB2-202ENST00000561514 XAGE1AQ9HD64 81 aa4.91□□□□□ -1.62
PALB2-202ENST00000561514 IGKV4-1P06312 121 aa4.9□□□□□ -1.63
PALB2-202ENST00000561514 KRTAP13-2Q52LG2 175 aa4.9□□□□□ -1.63
PALB2-202ENST00000561514 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.9□□□□□ -1.63
PALB2-202ENST00000561514 LINC00575Q6W349 94 aa4.9□□□□□ -1.63
PALB2-202ENST00000561514 Q8N9P0 234 aaPredicted RBP4.9□□□□□ -1.63
PALB2-202ENST00000561514 HIGD2AQ9BW72 106 aa4.9□□□□□ -1.63
PALB2-202ENST00000561514 ETDCA0A1B0GVM5 59 aa4.89□□□□□ -1.63
PALB2-202ENST00000561514 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
PALB2-202ENST00000561514 TYMSOSQ8TAI1 123 aa4.89□□□□□ -1.63
PALB2-202ENST00000561514 LINC00208Q96KT6 92 aa4.89□□□□□ -1.63
PALB2-202ENST00000561514 TOMM7Q9P0U1 55 aa4.89□□□□□ -1.63
PALB2-202ENST00000561514 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
PALB2-202ENST00000561514 LINC00304Q8N9R0 145 aa4.85□□□□□ -1.63
PALB2-202ENST00000561514 ANAPC11Q9NYG5 84 aa4.85□□□□□ -1.63
PALB2-202ENST00000561514 RPL37AP8A6NKH3 93 aa4.84□□□□□ -1.63
PALB2-202ENST00000561514 LINC00313P59037 77 aa4.84□□□□□ -1.63
PALB2-202ENST00000561514 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
PALB2-202ENST00000561514 KCNQ1DNQ9H478 68 aa4.84□□□□□ -1.63
PALB2-202ENST00000561514 KRTAP9-6A0A140TA67 174 aa4.83□□□□□ -1.64
PALB2-202ENST00000561514 MOBPQ13875 183 aa4.83□□□□□ -1.64
PALB2-202ENST00000561514 RETNLBQ9BQ08 111 aa4.83□□□□□ -1.64
PALB2-202ENST00000561514 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
PALB2-202ENST00000561514 IGLV7-46A0A075B6I9 117 aa4.81□□□□□ -1.64
PALB2-202ENST00000561514 C6orf99Q4VX62 202 aa4.81□□□□□ -1.64
PALB2-202ENST00000561514 NOTCH2NLQ7Z3S9 236 aa4.81□□□□□ -1.64
PALB2-202ENST00000561514 PRLHP81277 87 aa4.8□□□□□ -1.64
PALB2-202ENST00000561514 SPAG11AQ6PDA7 123 aa4.79□□□□□ -1.64
PALB2-202ENST00000561514 SMIM29Q86T20 159 aa4.79□□□□□ -1.64
PALB2-202ENST00000561514 Q8NDZ9 215 aa4.79□□□□□ -1.64
PALB2-202ENST00000561514 Q6ZQY7 126 aa4.78□□□□□ -1.64
PALB2-202ENST00000561514 KRTAP13-3Q3SY46 172 aa4.77□□□□□ -1.65
PALB2-202ENST00000561514 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
PALB2-202ENST00000561514 SPRR4Q96PI1 79 aa4.77□□□□□ -1.65
PALB2-202ENST00000561514 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.76□□□□□ -1.65
PALB2-202ENST00000561514 IGLV6-57P01721 117 aa4.76□□□□□ -1.65
PALB2-202ENST00000561514 KRTAP4-12Q9BQ66 201 aa4.76□□□□□ -1.65
PALB2-202ENST00000561514 SPRR1AP35321 89 aa4.74□□□□□ -1.65
PALB2-202ENST00000561514 KRTAP19-4Q3LI73 84 aa4.74□□□□□ -1.65
PALB2-202ENST00000561514 A8MU10 97 aa4.73□□□□□ -1.65
PALB2-202ENST00000561514 KRTAP4-16G5E9R7 235 aaPredicted RBP4.73□□□□□ -1.65
PALB2-202ENST00000561514 LINC00483Q53H64 154 aa4.73□□□□□ -1.65
PALB2-202ENST00000561514 KRTAP4-1Q9BYQ7 146 aa4.73□□□□□ -1.65
PALB2-202ENST00000561514 ZNF706Q9Y5V0 76 aaPredicted RBP4.73□□□□□ -1.65
PALB2-202ENST00000561514 RPS29P62273 56 aaKnown RBP4.72□□□□□ -1.65
PALB2-202ENST00000561514 IGLV5-48A0A075B6I7 105 aa4.71□□□□□ -1.66
PALB2-202ENST00000561514 IGHV6-1A0A0B4J1U7 121 aa4.71□□□□□ -1.66
PALB2-202ENST00000561514 SPINK1P00995 79 aa4.71□□□□□ -1.66
PALB2-202ENST00000561514 COA5Q86WW8 74 aa4.71□□□□□ -1.66
PALB2-202ENST00000561514 Q8NBF4 154 aa4.71□□□□□ -1.66
PALB2-202ENST00000561514 H0Y9P7 68 aa4.7□□□□□ -1.66
PALB2-202ENST00000561514 Q8N9L7 120 aa4.69□□□□□ -1.66
PALB2-202ENST00000561514 SEC61BP60468 96 aaKnown RBP4.68□□□□□ -1.66
PALB2-202ENST00000561514 Q8N377 158 aa4.68□□□□□ -1.66
PALB2-202ENST00000561514 KRTAP19-2Q3LHN2 52 aa4.67□□□□□ -1.66
PALB2-202ENST00000561514 SSBP3-AS1Q7Z2R9 100 aa4.67□□□□□ -1.66
PALB2-202ENST00000561514 FSIP2Q5CZC0 6907 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms