RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 C15orf56Q8N910 161 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 UBL5Q9BZL1 73 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 XAGE1AQ9HD64 81 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 LINC00474Q9P2X8 69 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 USH2AO75445 5202 aa1.94□□□□□ -2.1
SPG11-225ENST00000561391 A8MU10 97 aa1.93□□□□□ -2.1
SPG11-225ENST00000561391 MT-ATP8P03928 68 aa1.93□□□□□ -2.1
SPG11-225ENST00000561391 KRTAP1-4P0C5Y4 121 aa1.93□□□□□ -2.1
SPG11-225ENST00000561391 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
SPG11-225ENST00000561391 LINC00526Q96FQ7 95 aa1.93□□□□□ -2.1
SPG11-225ENST00000561391 DPH3Q96FX2 82 aa1.93□□□□□ -2.1
SPG11-225ENST00000561391 LAMTOR3Q9UHA4 124 aa1.93□□□□□ -2.1
SPG11-225ENST00000561391 MACF1Q9UPN3 7388 aaKnown RBP1.93□□□□□ -2.1
SPG11-225ENST00000561391 ETDCA0A1B0GVM5 59 aa1.92□□□□□ -2.1
SPG11-225ENST00000561391 KRTAP12-2P59991 146 aa1.92□□□□□ -2.1
SPG11-225ENST00000561391 Q6JHZ5 121 aa1.92□□□□□ -2.1
SPG11-225ENST00000561391 MRPL55Q7Z7F7 128 aaKnown RBP1.92□□□□□ -2.1
SPG11-225ENST00000561391 ANAPC13Q9BS18 74 aa1.92□□□□□ -2.1
SPG11-225ENST00000561391 C14orf132Q9NPU4 83 aa1.92□□□□□ -2.1
SPG11-225ENST00000561391 C22orf24Q9Y442 160 aa1.92□□□□□ -2.1
SPG11-225ENST00000561391 NEBP20929 6669 aa1.92□□□□□ -2.1
SPG11-225ENST00000561391 IGLV1-50A0A075B6I6 118 aa1.91□□□□□ -2.1
SPG11-225ENST00000561391 H0Y9J4 135 aa1.91□□□□□ -2.1
SPG11-225ENST00000561391 BCE1O60756 84 aa1.91□□□□□ -2.1
SPG11-225ENST00000561391 SPRR1AP35321 89 aa1.91□□□□□ -2.1
SPG11-225ENST00000561391 Q6ZQY7 126 aa1.91□□□□□ -2.1
SPG11-225ENST00000561391 Q6ZRX8 168 aa1.91□□□□□ -2.1
SPG11-225ENST00000561391 SMIM20Q8N5G0 67 aa1.91□□□□□ -2.1
SPG11-225ENST00000561391 C7orf33Q8WU49 177 aa1.91□□□□□ -2.1
SPG11-225ENST00000561391 F8WEM9 126 aa1.9□□□□□ -2.11
SPG11-225ENST00000561391 ATOX1O00244 68 aa1.9□□□□□ -2.11
SPG11-225ENST00000561391 KRTAP6-3Q3LI67 103 aa1.9□□□□□ -2.11
SPG11-225ENST00000561391 Q6ZQT0 140 aa1.9□□□□□ -2.11
SPG11-225ENST00000561391 C9orf163Q8N9P6 203 aa1.9□□□□□ -2.11
SPG11-225ENST00000561391 Q8NDZ9 215 aa1.9□□□□□ -2.11
SPG11-225ENST00000561391 LINC00846Q9NV44 126 aa1.9□□□□□ -2.11
SPG11-225ENST00000561391 MUC17Q685J3 4493 aa1.9□□□□□ -2.11
SPG11-225ENST00000561391 IGLV5-48A0A075B6I7 105 aa1.89□□□□□ -2.11
SPG11-225ENST00000561391 TRBV7-4A0A0J9YYF1 115 aa1.89□□□□□ -2.11
SPG11-225ENST00000561391 KRTAP4-16G5E9R7 235 aaPredicted RBP1.89□□□□□ -2.11
SPG11-225ENST00000561391 CRYGAP11844 174 aa1.89□□□□□ -2.11
SPG11-225ENST00000561391 SPINK6Q6UWN8 80 aa1.89□□□□□ -2.11
SPG11-225ENST00000561391 KRTAP11-1Q8IUC1 163 aa1.89□□□□□ -2.11
SPG11-225ENST00000561391 UQCRQO14949 82 aa1.88□□□□□ -2.11
SPG11-225ENST00000561391 HIST1H4AP62805 103 aaKnown RBP1.88□□□□□ -2.11
SPG11-225ENST00000561391 UBE2BP63146 152 aa1.88□□□□□ -2.11
SPG11-225ENST00000561391 MT1HP80294 61 aa1.88□□□□□ -2.11
SPG11-225ENST00000561391 NREPQ16612 68 aa1.88□□□□□ -2.11
SPG11-225ENST00000561391 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
SPG11-225ENST00000561391 FAM19A5Q7Z5A7 132 aaPredicted RBP1.88□□□□□ -2.11
SPG11-225ENST00000561391 DEFB105AQ8NG35 78 aa1.88□□□□□ -2.11
SPG11-225ENST00000561391 SMCR5Q8TEV8 140 aa1.88□□□□□ -2.11
SPG11-225ENST00000561391 IGKV3D-7A0A0C4DH55 119 aa1.87□□□□□ -2.11
SPG11-225ENST00000561391 FAM236AA0A1B0GUQ0 79 aa1.87□□□□□ -2.11
SPG11-225ENST00000561391 FAM236BA0A1B0GV22 79 aa1.87□□□□□ -2.11
SPG11-225ENST00000561391 COX7CP15954 63 aa1.87□□□□□ -2.11
SPG11-225ENST00000561391 C3orf22Q8N5N4 141 aa1.87□□□□□ -2.11
SPG11-225ENST00000561391 SERP2Q8N6R1 65 aa1.87□□□□□ -2.11
SPG11-225ENST00000561391 KRTAP4-1Q9BYQ7 146 aa1.87□□□□□ -2.11
SPG11-225ENST00000561391 PSORS1C2Q9UIG4 136 aa1.87□□□□□ -2.11
SPG11-225ENST00000561391 ZNF706Q9Y5V0 76 aaPredicted RBP1.87□□□□□ -2.11
SPG11-225ENST00000561391 TRAV7A0A075B6U4 112 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 A0A096LNI7 61 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 IGKV2-24A0A0C4DH68 120 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 A0A1W2PNN7 141 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 M0R2T5 61 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 BPY2O14599 106 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 NDUFC1O43677 76 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 CHTF8P0CG12 524 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 SPRR1BP22528 89 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 UBE2AP49459 152 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 C1orf137Q5JT78 98 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 FAM19A1Q7Z5A9 133 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 SPRR4Q96PI1 79 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 Q9BRP9 147 aa1.86□□□□□ -2.11
SPG11-225ENST00000561391 J3KT08 172 aa1.85□□□□□ -2.11
SPG11-225ENST00000561391 ERC2-IT1O76042 136 aa1.85□□□□□ -2.11
SPG11-225ENST00000561391 C9orf153Q5TBE3 101 aa1.85□□□□□ -2.11
SPG11-225ENST00000561391 SPACA4Q8TDM5 124 aa1.85□□□□□ -2.11
SPG11-225ENST00000561391 HIGD2AQ9BW72 106 aa1.85□□□□□ -2.11
SPG11-225ENST00000561391 ANAPC11Q9NYG5 84 aa1.85□□□□□ -2.11
SPG11-225ENST00000561391 PLAC8Q9NZF1 115 aa1.85□□□□□ -2.11
SPG11-225ENST00000561391 RPS28P62857 69 aaKnown RBP1.84□□□□□ -2.11
SPG11-225ENST00000561391 A0A1W2PNM2 257 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 CCDC179H3BU77 68 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 ZNF861PO60384 105 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 NDUFB1O75438 58 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 TMEM258P61165 79 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 PRLHP81277 87 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 LINC00483Q53H64 154 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 PHF5AQ7RTV0 110 aaKnown RBP1.83□□□□□ -2.12
SPG11-225ENST00000561391 ST20-AS1Q8NBB2 130 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 SS18L2Q9UHA2 77 aa1.83□□□□□ -2.12
SPG11-225ENST00000561391 A0A087WVE0 104 aa1.82□□□□□ -2.12
SPG11-225ENST00000561391 C5orf47Q569G3 176 aa1.82□□□□□ -2.12
SPG11-225ENST00000561391 IGFL1Q6UW32 110 aa1.82□□□□□ -2.12
SPG11-225ENST00000561391 KRTAP13-1Q8IUC0 172 aa1.82□□□□□ -2.12
SPG11-225ENST00000561391 RETNLBQ9BQ08 111 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms