RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 ASB16-AS1Q495Z4 193 aa5.77□□□□□ -1.49
LRRC28-221ENST00000561276 LOC110117498A0A087WWA1 95 aa5.76□□□□□ -1.49
LRRC28-221ENST00000561276 PDE6GP18545 87 aa5.76□□□□□ -1.49
LRRC28-221ENST00000561276 Q6ZQT0 140 aa5.76□□□□□ -1.49
LRRC28-221ENST00000561276 F8W1H4 67 aa5.75□□□□□ -1.49
LRRC28-221ENST00000561276 SS18L2Q9UHA2 77 aa5.75□□□□□ -1.49
LRRC28-221ENST00000561276 A0A1B0GV90 55 aa5.73□□□□□ -1.49
LRRC28-221ENST00000561276 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
LRRC28-221ENST00000561276 TPRXLQ17RH7 258 aa5.72□□□□□ -1.49
LRRC28-221ENST00000561276 A0A1B0GW54 56 aa5.71□□□□□ -1.5
LRRC28-221ENST00000561276 Q96NJ1 140 aa5.71□□□□□ -1.5
LRRC28-221ENST00000561276 KRTAP13-3Q3SY46 172 aa5.7□□□□□ -1.5
LRRC28-221ENST00000561276 ETDBQ3ZM63 59 aa5.69□□□□□ -1.5
LRRC28-221ENST00000561276 DEFB116Q30KQ4 102 aa5.68□□□□□ -1.5
LRRC28-221ENST00000561276 LINC00472Q9H8W2 130 aa5.68□□□□□ -1.5
LRRC28-221ENST00000561276 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
LRRC28-221ENST00000561276 LPAP08519 4548 aa5.67□□□□□ -1.5
LRRC28-221ENST00000561276 IGKV4-1P06312 121 aa5.66□□□□□ -1.5
LRRC28-221ENST00000561276 HMCN2Q8NDA2 5059 aa5.65□□□□□ -1.5
LRRC28-221ENST00000561276 NREPQ16612 68 aa5.64□□□□□ -1.51
LRRC28-221ENST00000561276 KRTAP9-3Q9BYQ3 159 aa5.64□□□□□ -1.51
LRRC28-221ENST00000561276 SIGMAR1Q99720 223 aa5.63□□□□□ -1.51
LRRC28-221ENST00000561276 J3KT08 172 aa5.61□□□□□ -1.51
LRRC28-221ENST00000561276 Q6ZVQ6 151 aa5.59□□□□□ -1.51
LRRC28-221ENST00000561276 LINC00846Q9NV44 126 aa5.59□□□□□ -1.51
LRRC28-221ENST00000561276 IGHV6-1A0A0B4J1U7 121 aa5.58□□□□□ -1.52
LRRC28-221ENST00000561276 LINC00313P59037 77 aa5.58□□□□□ -1.52
LRRC28-221ENST00000561276 A0A1B0GVX0 72 aa5.57□□□□□ -1.52
LRRC28-221ENST00000561276 NDUFB1O75438 58 aa5.57□□□□□ -1.52
LRRC28-221ENST00000561276 DSCR10P59022 87 aa5.57□□□□□ -1.52
LRRC28-221ENST00000561276 NOTCH2NLQ7Z3S9 236 aa5.57□□□□□ -1.52
LRRC28-221ENST00000561276 A8MWP4 228 aa5.56□□□□□ -1.52
LRRC28-221ENST00000561276 UBL5Q9BZL1 73 aa5.56□□□□□ -1.52
LRRC28-221ENST00000561276 LRP2P98164 4655 aa5.56□□□□□ -1.52
LRRC28-221ENST00000561276 IGKV3D-7A0A0C4DH55 119 aa5.55□□□□□ -1.52
LRRC28-221ENST00000561276 BPY2O14599 106 aa5.55□□□□□ -1.52
LRRC28-221ENST00000561276 ACYP1P07311 99 aa5.54□□□□□ -1.52
LRRC28-221ENST00000561276 SEC61BP60468 96 aaKnown RBP5.54□□□□□ -1.52
LRRC28-221ENST00000561276 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
LRRC28-221ENST00000561276 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
LRRC28-221ENST00000561276 C8orf87E5RJ46 101 aa5.52□□□□□ -1.53
LRRC28-221ENST00000561276 RPL37P61927 97 aaKnown RBP5.52□□□□□ -1.53
LRRC28-221ENST00000561276 KRTAP16-1A8MUX0 517 aa5.51□□□□□ -1.53
LRRC28-221ENST00000561276 K7EQZ3 153 aa5.51□□□□□ -1.53
LRRC28-221ENST00000561276 Q75L30 129 aa5.51□□□□□ -1.53
LRRC28-221ENST00000561276 C8orf17Q9NRJ1 99 aa5.51□□□□□ -1.53
LRRC28-221ENST00000561276 FAM240AA0A1B0GVK7 77 aa5.5□□□□□ -1.53
LRRC28-221ENST00000561276 A8MUU9 505 aa5.5□□□□□ -1.53
LRRC28-221ENST00000561276 PCOTHQ58A44 107 aa5.5□□□□□ -1.53
LRRC28-221ENST00000561276 C20orf166-AS1Q96NR2 134 aa5.5□□□□□ -1.53
LRRC28-221ENST00000561276 UBR4Q5T4S7 5183 aa5.49□□□□□ -1.53
LRRC28-221ENST00000561276 ATP11AUNQ6ZP68 121 aa5.48□□□□□ -1.53
LRRC28-221ENST00000561276 Q8N9L7 120 aa5.48□□□□□ -1.53
LRRC28-221ENST00000561276 MMP24-AS1A0A0U1RRL7 71 aa5.46□□□□□ -1.54
LRRC28-221ENST00000561276 J3QR89 54 aa5.46□□□□□ -1.54
LRRC28-221ENST00000561276 CXCL6P80162 114 aa5.46□□□□□ -1.54
LRRC28-221ENST00000561276 KRTAP4-1Q9BYQ7 146 aa5.45□□□□□ -1.54
LRRC28-221ENST00000561276 hDV103S1A0JD37 113 aa5.44□□□□□ -1.54
LRRC28-221ENST00000561276 Q8N9P0 234 aaPredicted RBP5.44□□□□□ -1.54
LRRC28-221ENST00000561276 TMEM254Q8TBM7 123 aa5.43□□□□□ -1.54
LRRC28-221ENST00000561276 MRPL34Q9BQ48 92 aaKnown RBP5.43□□□□□ -1.54
LRRC28-221ENST00000561276 CASC2Q6XLA1 102 aa5.42□□□□□ -1.54
LRRC28-221ENST00000561276 WFDC13Q8IUB5 93 aa5.42□□□□□ -1.54
LRRC28-221ENST00000561276 LINC00643Q86TS7 51 aa5.41□□□□□ -1.54
LRRC28-221ENST00000561276 HCG22E2RYF7 251 aa5.4□□□□□ -1.54
LRRC28-221ENST00000561276 ATP5EP2Q5VTU8 51 aa5.4□□□□□ -1.54
LRRC28-221ENST00000561276 MUC17Q685J3 4493 aa5.39□□□□□ -1.55
LRRC28-221ENST00000561276 NDUFS5O43920 106 aa5.39□□□□□ -1.55
LRRC28-221ENST00000561276 K7ERU9 68 aa5.38□□□□□ -1.55
LRRC28-221ENST00000561276 HIST1H4AP62805 103 aaKnown RBP5.37□□□□□ -1.55
LRRC28-221ENST00000561276 ZCCHC13Q8WW36 166 aaKnown RBP5.37□□□□□ -1.55
LRRC28-221ENST00000561276 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
LRRC28-221ENST00000561276 MUC2Q02817 5179 aa5.34□□□□□ -1.55
LRRC28-221ENST00000561276 A0A087WVE0 104 aa5.32□□□□□ -1.56
LRRC28-221ENST00000561276 A0A0U1RQV1 116 aa5.32□□□□□ -1.56
LRRC28-221ENST00000561276 Q5W150 140 aa5.32□□□□□ -1.56
LRRC28-221ENST00000561276 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
LRRC28-221ENST00000561276 KRTAP3-1Q9BYR8 98 aa5.31□□□□□ -1.56
LRRC28-221ENST00000561276 SPINK7P58062 85 aa5.29□□□□□ -1.56
LRRC28-221ENST00000561276 TP53AIP1Q9HCN2 124 aa5.29□□□□□ -1.56
LRRC28-221ENST00000561276 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
LRRC28-221ENST00000561276 MT-ATP8P03928 68 aa5.26□□□□□ -1.57
LRRC28-221ENST00000561276 HRES1P13985 223 aa5.25□□□□□ -1.57
LRRC28-221ENST00000561276 IMUPQ9GZP8 106 aa5.24□□□□□ -1.57
LRRC28-221ENST00000561276 IGKV2D-30A0A075B6S6 120 aa5.23□□□□□ -1.57
LRRC28-221ENST00000561276 IGKV2-30P06310 120 aa5.23□□□□□ -1.57
LRRC28-221ENST00000561276 COX6B2Q6YFQ2 88 aa5.23□□□□□ -1.57
LRRC28-221ENST00000561276 KRTAP23-1A1A580 65 aa5.22□□□□□ -1.57
LRRC28-221ENST00000561276 RBM12B-AS1Q9P1G2 102 aa5.22□□□□□ -1.57
LRRC28-221ENST00000561276 MPLKIPQ8TAP9 179 aa5.21□□□□□ -1.58
LRRC28-221ENST00000561276 UQCRQO14949 82 aa5.2□□□□□ -1.58
LRRC28-221ENST00000561276 C7orf65Q6ZTY9 151 aa5.2□□□□□ -1.58
LRRC28-221ENST00000561276 TRAV22A0A0B4J277 110 aa5.19□□□□□ -1.58
LRRC28-221ENST00000561276 SCGB1A1P11684 91 aa5.19□□□□□ -1.58
LRRC28-221ENST00000561276 FAM236DA0A1B0GTK5 79 aa5.18□□□□□ -1.58
LRRC28-221ENST00000561276 FAM236CP0DP71 79 aa5.18□□□□□ -1.58
LRRC28-221ENST00000561276 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
LRRC28-221ENST00000561276 H0Y9P7 68 aa5.16□□□□□ -1.58
LRRC28-221ENST00000561276 MT1HP80294 61 aa5.16□□□□□ -1.58
LRRC28-221ENST00000561276 CYP4F30PQ9H0H9 118 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms