RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 SERP1Q9Y6X1 66 aa4.17□□□□□ -1.74
SPG11-224ENST00000561268 UBR4Q5T4S7 5183 aa4.17□□□□□ -1.74
SPG11-224ENST00000561268 H7BZZ5 65 aa4.16□□□□□ -1.74
SPG11-224ENST00000561268 IGLV7-43P04211 117 aa4.16□□□□□ -1.74
SPG11-224ENST00000561268 Q6ZRX8 168 aa4.16□□□□□ -1.74
SPG11-224ENST00000561268 FAM19A1Q7Z5A9 133 aa4.16□□□□□ -1.74
SPG11-224ENST00000561268 SPRR4Q96PI1 79 aa4.16□□□□□ -1.74
SPG11-224ENST00000561268 FAM236DA0A1B0GTK5 79 aa4.15□□□□□ -1.75
SPG11-224ENST00000561268 H0Y9J4 135 aa4.15□□□□□ -1.75
SPG11-224ENST00000561268 FAM236CP0DP71 79 aa4.15□□□□□ -1.75
SPG11-224ENST00000561268 XAGE1AQ9HD64 81 aa4.15□□□□□ -1.75
SPG11-224ENST00000561268 IGLV1-50A0A075B6I6 118 aa4.14□□□□□ -1.75
SPG11-224ENST00000561268 NREPQ16612 68 aa4.14□□□□□ -1.75
SPG11-224ENST00000561268 C1orf137Q5JT78 98 aa4.14□□□□□ -1.75
SPG11-224ENST00000561268 IGLV8-61A0A075B6I0 122 aa4.13□□□□□ -1.75
SPG11-224ENST00000561268 C20orf197Q8N268 126 aa4.13□□□□□ -1.75
SPG11-224ENST00000561268 BPY2O14599 106 aa4.12□□□□□ -1.75
SPG11-224ENST00000561268 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
SPG11-224ENST00000561268 Q8N377 158 aa4.12□□□□□ -1.75
SPG11-224ENST00000561268 Q8NBF4 154 aa4.12□□□□□ -1.75
SPG11-224ENST00000561268 OCR1Q9BZK8 76 aa4.12□□□□□ -1.75
SPG11-224ENST00000561268 CYSTM1Q9H1C7 97 aa4.12□□□□□ -1.75
SPG11-224ENST00000561268 ETDCA0A1B0GVM5 59 aa4.11□□□□□ -1.75
SPG11-224ENST00000561268 C4orf26Q17RF5 130 aa4.11□□□□□ -1.75
SPG11-224ENST00000561268 C1orf195Q5TG92 126 aa4.11□□□□□ -1.75
SPG11-224ENST00000561268 KRTAP13-1Q8IUC0 172 aa4.11□□□□□ -1.75
SPG11-224ENST00000561268 TMEM254Q8TBM7 123 aa4.11□□□□□ -1.75
SPG11-224ENST00000561268 SMIM26A0A096LP01 95 aa4.1□□□□□ -1.75
SPG11-224ENST00000561268 MRPL55Q7Z7F7 128 aaKnown RBP4.1□□□□□ -1.75
SPG11-224ENST00000561268 PRR26Q8N8Z3 221 aa4.1□□□□□ -1.75
SPG11-224ENST00000561268 A0A0U1RQV1 116 aa4.09□□□□□ -1.75
SPG11-224ENST00000561268 ZNF861PO60384 105 aa4.09□□□□□ -1.75
SPG11-224ENST00000561268 UBE2BP63146 152 aa4.09□□□□□ -1.75
SPG11-224ENST00000561268 CD164Q04900 197 aa4.09□□□□□ -1.75
SPG11-224ENST00000561268 SPRR1BP22528 89 aa4.08□□□□□ -1.76
SPG11-224ENST00000561268 Q9BRP9 147 aa4.08□□□□□ -1.76
SPG11-224ENST00000561268 LPAP08519 4548 aa4.07□□□□□ -1.76
SPG11-224ENST00000561268 H3BPC8 53 aa4.07□□□□□ -1.76
SPG11-224ENST00000561268 NDUFB1O75438 58 aa4.07□□□□□ -1.76
SPG11-224ENST00000561268 Q5XG85 94 aa4.07□□□□□ -1.76
SPG11-224ENST00000561268 A0A1W2PNM2 257 aa4.06□□□□□ -1.76
SPG11-224ENST00000561268 F8WEM9 126 aa4.06□□□□□ -1.76
SPG11-224ENST00000561268 A0A087X002 238 aa4.05□□□□□ -1.76
SPG11-224ENST00000561268 SMIM29Q86T20 159 aa4.05□□□□□ -1.76
SPG11-224ENST00000561268 ZCCHC13Q8WW36 166 aaKnown RBP4.04□□□□□ -1.76
SPG11-224ENST00000561268 DSCR10P59022 87 aa4.03□□□□□ -1.76
SPG11-224ENST00000561268 FAM229BQ4G0N7 80 aa4.03□□□□□ -1.76
SPG11-224ENST00000561268 KRTAP13-2Q52LG2 175 aa4.03□□□□□ -1.76
SPG11-224ENST00000561268 CYP4F30PQ9H0H9 118 aa4.03□□□□□ -1.76
SPG11-224ENST00000561268 HCG22E2RYF7 251 aa4.02□□□□□ -1.77
SPG11-224ENST00000561268 HRCT1Q6UXD1 115 aa4.02□□□□□ -1.77
SPG11-224ENST00000561268 SPANXA2-OT1Q8N9U9 137 aa4.01□□□□□ -1.77
SPG11-224ENST00000561268 SNURFQ9Y675 71 aa4.01□□□□□ -1.77
SPG11-224ENST00000561268 hDV103S1A0JD37 113 aa4□□□□□ -1.77
SPG11-224ENST00000561268 PMAIP1Q13794 54 aa4□□□□□ -1.77
SPG11-224ENST00000561268 IGFL1Q6UW32 110 aa4□□□□□ -1.77
SPG11-224ENST00000561268 DEFB105AQ8NG35 78 aa4□□□□□ -1.77
SPG11-224ENST00000561268 RNF213Q63HN8 5207 aa4□□□□□ -1.77
SPG11-224ENST00000561268 PRLHP81277 87 aa3.99□□□□□ -1.77
SPG11-224ENST00000561268 A8MWP4 228 aa3.98□□□□□ -1.77
SPG11-224ENST00000561268 UBE2AP49459 152 aa3.98□□□□□ -1.77
SPG11-224ENST00000561268 MP68P56378 58 aa3.98□□□□□ -1.77
SPG11-224ENST00000561268 Q1T7F1 81 aa3.98□□□□□ -1.77
SPG11-224ENST00000561268 FP248Q71RG6 208 aaPredicted RBP3.98□□□□□ -1.77
SPG11-224ENST00000561268 ST20-AS1Q8NBB2 130 aa3.98□□□□□ -1.77
SPG11-224ENST00000561268 TYMSOSQ8TAI1 123 aa3.98□□□□□ -1.77
SPG11-224ENST00000561268 K7EQZ3 153 aa3.97□□□□□ -1.77
SPG11-224ENST00000561268 TPRXLQ17RH7 258 aa3.97□□□□□ -1.77
SPG11-224ENST00000561268 PRR15Q8IV56 129 aa3.97□□□□□ -1.77
SPG11-224ENST00000561268 Q8N9L7 120 aa3.97□□□□□ -1.77
SPG11-224ENST00000561268 LINC00304Q8N9R0 145 aa3.97□□□□□ -1.77
SPG11-224ENST00000561268 LINC00472Q9H8W2 130 aa3.97□□□□□ -1.77
SPG11-224ENST00000561268 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
SPG11-224ENST00000561268 LINC00483Q53H64 154 aa3.96□□□□□ -1.78
SPG11-224ENST00000561268 HIGD2AQ9BW72 106 aa3.96□□□□□ -1.78
SPG11-224ENST00000561268 ANAPC11Q9NYG5 84 aa3.96□□□□□ -1.78
SPG11-224ENST00000561268 ZNF706Q9Y5V0 76 aaPredicted RBP3.96□□□□□ -1.78
SPG11-224ENST00000561268 TRAV22A0A0B4J277 110 aa3.95□□□□□ -1.78
SPG11-224ENST00000561268 MOBPQ13875 183 aa3.95□□□□□ -1.78
SPG11-224ENST00000561268 PRR4Q16378 134 aa3.95□□□□□ -1.78
SPG11-224ENST00000561268 ASB16-AS1Q495Z4 193 aa3.95□□□□□ -1.78
SPG11-224ENST00000561268 A0A087WSZ3 146 aa3.94□□□□□ -1.78
SPG11-224ENST00000561268 MUC17Q685J3 4493 aa3.93□□□□□ -1.78
SPG11-224ENST00000561268 RPS29P62273 56 aaKnown RBP3.92□□□□□ -1.78
SPG11-224ENST00000561268 SPAG11AQ6PDA7 123 aa3.92□□□□□ -1.78
SPG11-224ENST00000561268 CASC2Q6XLA1 102 aa3.92□□□□□ -1.78
SPG11-224ENST00000561268 C1orf64Q8NEQ6 169 aa3.92□□□□□ -1.78
SPG11-224ENST00000561268 RETNLBQ9BQ08 111 aa3.91□□□□□ -1.78
SPG11-224ENST00000561268 MUC2Q02817 5179 aa3.9□□□□□ -1.78
SPG11-224ENST00000561268 LIMD2Q9BT23 127 aa3.9□□□□□ -1.79
SPG11-224ENST00000561268 IGLV7-46A0A075B6I9 117 aa3.89□□□□□ -1.79
SPG11-224ENST00000561268 KRTAP3-1Q9BYR8 98 aa3.89□□□□□ -1.79
SPG11-224ENST00000561268 MMP24-AS1A0A0U1RRL7 71 aa3.88□□□□□ -1.79
SPG11-224ENST00000561268 H0Y9P7 68 aa3.88□□□□□ -1.79
SPG11-224ENST00000561268 SPINK1P00995 79 aa3.88□□□□□ -1.79
SPG11-224ENST00000561268 KRTAP13-3Q3SY46 172 aa3.88□□□□□ -1.79
SPG11-224ENST00000561268 Q96NJ1 140 aa3.87□□□□□ -1.79
SPG11-224ENST00000561268 SSBP3-AS1Q7Z2R9 100 aa3.86□□□□□ -1.79
SPG11-224ENST00000561268 WFDC13Q8IUB5 93 aa3.86□□□□□ -1.79
SPG11-224ENST00000561268 BRK1Q8WUW1 75 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms