RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 ZZEF1O43149 2961 aa0.55□□□□□ -2.32
USP8-217ENST00000561211 MYCBP2O75592 4640 aa0.55□□□□□ -2.32
USP8-217ENST00000561211 DDX60Q8IY21 1712 aaKnown RBP0.55□□□□□ -2.32
USP8-217ENST00000561211 LRRK2Q5S007 2527 aa0.55□□□□□ -2.32
USP8-217ENST00000561211 LPAP08519 4548 aa0.54□□□□□ -2.32
USP8-217ENST00000561211 DCHS2Q6V1P9 2916 aa0.54□□□□□ -2.32
USP8-217ENST00000561211 M0R2T5 61 aa0.54□□□□□ -2.32
USP8-217ENST00000561211 GCN1Q92616 2671 aaKnown RBP0.54□□□□□ -2.32
USP8-217ENST00000561211 FLNAP21333 2647 aaKnown RBP0.53□□□□□ -2.32
USP8-217ENST00000561211 H3BUA1 57 aa0.53□□□□□ -2.32
USP8-217ENST00000561211 DEFB135Q30KP9 77 aa0.53□□□□□ -2.32
USP8-217ENST00000561211 DEFB106AQ8N104 65 aa0.53□□□□□ -2.32
USP8-217ENST00000561211 MAST4O15021 2626 aa0.53□□□□□ -2.32
USP8-217ENST00000561211 UTP20O75691 2785 aaKnown RBP0.53□□□□□ -2.32
USP8-217ENST00000561211 TRPM2O94759 1503 aa0.53□□□□□ -2.33
USP8-217ENST00000561211 HRNRQ86YZ3 2850 aaPredicted RBP0.52□□□□□ -2.33
USP8-217ENST00000561211 VPS13BQ7Z7G8 4022 aa0.52□□□□□ -2.33
USP8-217ENST00000561211 DNAH9Q9NYC9 4486 aa0.52□□□□□ -2.33
USP8-217ENST00000561211 ANKHD1Q8IWZ3 2542 aaKnown RBP0.52□□□□□ -2.33
USP8-217ENST00000561211 NDUFA1O15239 70 aa0.52□□□□□ -2.33
USP8-217ENST00000561211 TENM2Q9NT68 2774 aa0.52□□□□□ -2.33
USP8-217ENST00000561211 NBEAL2Q6ZNJ1 2754 aa0.51□□□□□ -2.33
USP8-217ENST00000561211 A0A0C4DFX4 3053 aa0.51□□□□□ -2.33
USP8-217ENST00000561211 IGLV5-48A0A075B6I7 105 aa0.51□□□□□ -2.33
USP8-217ENST00000561211 FAM186AA6NE01 2351 aa0.51□□□□□ -2.33
USP8-217ENST00000561211 TACC2O95359 2948 aa0.51□□□□□ -2.33
USP8-217ENST00000561211 KAAG1Q9UBP8 84 aa0.51□□□□□ -2.33
USP8-217ENST00000561211 SACSQ9NZJ4 4579 aa0.51□□□□□ -2.33
USP8-217ENST00000561211 SPTBN4Q9H254 2564 aa0.51□□□□□ -2.33
USP8-217ENST00000561211 DNAH11Q96DT5 4516 aa0.5□□□□□ -2.33
USP8-217ENST00000561211 STAB1Q9NY15 2570 aa0.5□□□□□ -2.33
USP8-217ENST00000561211 WFDC10BQ8IUB3 73 aa0.5□□□□□ -2.33
USP8-217ENST00000561211 MTORP42345 2549 aa0.5□□□□□ -2.33
USP8-217ENST00000561211 FASNP49327 2511 aaKnown RBP0.5□□□□□ -2.33
USP8-217ENST00000561211 SPG11Q96JI7 2443 aa0.5□□□□□ -2.33
USP8-217ENST00000561211 DMXL1Q9Y485 3027 aa0.48□□□□□ -2.33
USP8-217ENST00000561211 MMP24-AS1A0A0U1RRL7 71 aa0.48□□□□□ -2.33
USP8-217ENST00000561211 ANKRD11Q6UB99 2663 aaPredicted RBP0.47□□□□□ -2.33
USP8-217ENST00000561211 COL7A1Q02388 2944 aa0.47□□□□□ -2.33
USP8-217ENST00000561211 CCDC168Q8NDH2 2452 aa0.46□□□□□ -2.34
USP8-217ENST00000561211 HIVEP1P15822 2718 aa0.46□□□□□ -2.34
USP8-217ENST00000561211 SONP18583 2426 aaKnown RBP0.46□□□□□ -2.34
USP8-217ENST00000561211 TEP1Q99973 2627 aaKnown RBP0.46□□□□□ -2.34
USP8-217ENST00000561211 NBEAQ8NFP9 2946 aa0.45□□□□□ -2.34
USP8-217ENST00000561211 DNAH3Q8TD57 4116 aa0.45□□□□□ -2.34
USP8-217ENST00000561211 SPRR2DP22532 72 aa0.45□□□□□ -2.34
USP8-217ENST00000561211 DEFB131AP59861 70 aa0.45□□□□□ -2.34
USP8-217ENST00000561211 SNRPGP62308 76 aaKnown RBP0.45□□□□□ -2.34
USP8-217ENST00000561211 FAT4Q6V0I7 4981 aa0.45□□□□□ -2.34
USP8-217ENST00000561211 HSPG2P98160 4391 aa0.45□□□□□ -2.34
USP8-217ENST00000561211 ANK3Q12955 4377 aaKnown RBP0.44□□□□□ -2.34
USP8-217ENST00000561211 MYO18BQ8IUG5 2567 aa0.44□□□□□ -2.34
USP8-217ENST00000561211 HECTD4Q9Y4D8 3996 aa0.44□□□□□ -2.34
USP8-217ENST00000561211 DNAH2Q9P225 4427 aa0.44□□□□□ -2.34
USP8-217ENST00000561211 MAP1AP78559 2803 aaPredicted RBP0.43□□□□□ -2.34
USP8-217ENST00000561211 PKHD1P08F94 4074 aa0.43□□□□□ -2.34
USP8-217ENST00000561211 USP9XQ93008 2570 aaPredicted RBP0.43□□□□□ -2.34
USP8-217ENST00000561211 H0YGG7 62 aa0.43□□□□□ -2.34
USP8-217ENST00000561211 NOP10Q9NPE3 64 aaKnown RBP0.43□□□□□ -2.34
USP8-217ENST00000561211 FLGP20930 4061 aaPredicted RBP0.43□□□□□ -2.34
USP8-217ENST00000561211 TGP01266 2768 aa0.43□□□□□ -2.34
USP8-217ENST00000561211 COL12A1Q99715 3063 aa0.43□□□□□ -2.34
USP8-217ENST00000561211 STAB2Q8WWQ8 2551 aa0.43□□□□□ -2.34
USP8-217ENST00000561211 CUBNO60494 3623 aa0.43□□□□□ -2.34
USP8-217ENST00000561211 COL6A3P12111 3177 aa0.41□□□□□ -2.34
USP8-217ENST00000561211 APOBP04114 4563 aaKnown RBP0.41□□□□□ -2.34
USP8-217ENST00000561211 ZANQ9Y493 2812 aa0.41□□□□□ -2.34
USP8-217ENST00000561211 DYNC2H1Q8NCM8 4307 aaKnown RBP0.41□□□□□ -2.34
USP8-217ENST00000561211 USP9YO00507 2555 aaPredicted RBP0.41□□□□□ -2.34
USP8-217ENST00000561211 KALRNO60229 2985 aa0.4□□□□□ -2.34
USP8-217ENST00000561211 AHNAKQ09666 5890 aaKnown RBP0.4□□□□□ -2.35
USP8-217ENST00000561211 PKHD1L1Q86WI1 4243 aa0.4□□□□□ -2.35
USP8-217ENST00000561211 COL6A5A8TX70 2615 aa0.39□□□□□ -2.35
USP8-217ENST00000561211 LRP1BQ9NZR2 4599 aa0.39□□□□□ -2.35
USP8-217ENST00000561211 C9orf92A6NGG3 77 aa0.39□□□□□ -2.35
USP8-217ENST00000561211 SPRR2BP35325 72 aa0.39□□□□□ -2.35
USP8-217ENST00000561211 CLTCL1P53675 1640 aa0.38□□□□□ -2.35
USP8-217ENST00000561211 DUOX1Q9NRD9 1551 aa0.38□□□□□ -2.35
USP8-217ENST00000561211 AKAP9Q99996 3911 aa0.37□□□□□ -2.35
USP8-217ENST00000561211 A8MTW9 85 aa0.37□□□□□ -2.35
USP8-217ENST00000561211 CHD7Q9P2D1 2997 aa0.37□□□□□ -2.35
USP8-217ENST00000561211 ACACBO00763 2458 aa0.37□□□□□ -2.35
USP8-217ENST00000561211 WDR87Q6ZQQ6 2873 aa0.36□□□□□ -2.35
USP8-217ENST00000561211 TLN2Q9Y4G6 2542 aa0.36□□□□□ -2.35
USP8-217ENST00000561211 VPS13DQ5THJ4 4388 aa0.36□□□□□ -2.35
USP8-217ENST00000561211 M0QY20 66 aa0.36□□□□□ -2.35
USP8-217ENST00000561211 POLR2KP53803 58 aaKnown RBP0.36□□□□□ -2.35
USP8-217ENST00000561211 CLPSL2Q6UWE3 100 aa0.36□□□□□ -2.35
USP8-217ENST00000561211 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
USP8-217ENST00000561211 NBEAL1Q6ZS30 2694 aa0.35□□□□□ -2.35
USP8-217ENST00000561211 RANBP2P49792 3224 aaKnown RBP0.35□□□□□ -2.35
USP8-217ENST00000561211 HMCN2Q8NDA2 5059 aa0.35□□□□□ -2.35
USP8-217ENST00000561211 CRYBG3Q68DQ2 2970 aa0.34□□□□□ -2.35
USP8-217ENST00000561211 FAT3Q8TDW7 4589 aa0.34□□□□□ -2.35
USP8-217ENST00000561211 DNAH8Q96JB1 4490 aa0.34□□□□□ -2.35
USP8-217ENST00000561211 LRP2P98164 4655 aa0.34□□□□□ -2.35
USP8-217ENST00000561211 M0QZ58 72 aa0.34□□□□□ -2.36
USP8-217ENST00000561211 MROH2BQ7Z745 1585 aa0.34□□□□□ -2.36
USP8-217ENST00000561211 NBPF19A0A087WUL8 3843 aa0.32□□□□□ -2.36
USP8-217ENST00000561211 MGAM2Q2M2H8 2515 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 565.6 ms