RNA–Protein interactions for RNA: ENST00000560964.1

WHAMM-202, Transcript of WAS protein homolog associated with actin, golgi membranes and microtubules, humanhuman

TSL 2

Gene WHAMM, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WHAMM-202ENST00000560964 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.01□□□□□ -2.09
WHAMM-202ENST00000560964 NBEAL2Q6ZNJ1 2754 aa2□□□□□ -2.09
WHAMM-202ENST00000560964 CEP290O15078 2479 aa2□□□□□ -2.09
WHAMM-202ENST00000560964 NCOR1O75376 2440 aa1.99□□□□□ -2.09
WHAMM-202ENST00000560964 CEP295Q9C0D2 2601 aa1.99□□□□□ -2.09
WHAMM-202ENST00000560964 CHD9Q3L8U1 2897 aa1.99□□□□□ -2.09
WHAMM-202ENST00000560964 AKAP6Q13023 2319 aa1.99□□□□□ -2.09
WHAMM-202ENST00000560964 BRCA2P51587 3418 aa1.99□□□□□ -2.09
WHAMM-202ENST00000560964 ATRQ13535 2644 aa1.99□□□□□ -2.09
WHAMM-202ENST00000560964 WNK1Q9H4A3 2382 aa1.99□□□□□ -2.09
WHAMM-202ENST00000560964 STAB1Q9NY15 2570 aa1.99□□□□□ -2.09
WHAMM-202ENST00000560964 TEX15Q9BXT5 2789 aa1.98□□□□□ -2.09
WHAMM-202ENST00000560964 C5orf42Q9H799 3197 aa1.98□□□□□ -2.09
WHAMM-202ENST00000560964 KRTAP12-4P60329 112 aa1.98□□□□□ -2.09
WHAMM-202ENST00000560964 PCOTHQ58A44 107 aa1.98□□□□□ -2.09
WHAMM-202ENST00000560964 KRTAP13-1Q8IUC0 172 aa1.98□□□□□ -2.09
WHAMM-202ENST00000560964 CFAP54Q96N23 3096 aa1.98□□□□□ -2.09
WHAMM-202ENST00000560964 NBEAQ8NFP9 2946 aa1.97□□□□□ -2.09
WHAMM-202ENST00000560964 DEFB136Q30KP8 78 aa1.97□□□□□ -2.09
WHAMM-202ENST00000560964 PIEZO2Q9H5I5 2752 aa1.97□□□□□ -2.09
WHAMM-202ENST00000560964 SPTA1P02549 2419 aa1.96□□□□□ -2.1
WHAMM-202ENST00000560964 ASPMQ8IZT6 3477 aa1.96□□□□□ -2.1
WHAMM-202ENST00000560964 NCOR2Q9Y618 2525 aa1.96□□□□□ -2.1
WHAMM-202ENST00000560964 ACACAQ13085 2346 aa1.96□□□□□ -2.1
WHAMM-202ENST00000560964 DNAH14Q0VDD8 3507 aa1.96□□□□□ -2.1
WHAMM-202ENST00000560964 NBEAL1Q6ZS30 2694 aa1.95□□□□□ -2.1
WHAMM-202ENST00000560964 FRYQ5TBA9 3013 aa1.95□□□□□ -2.1
WHAMM-202ENST00000560964 A0A096LPF7 62 aa1.95□□□□□ -2.1
WHAMM-202ENST00000560964 MMP24-AS1A0A0U1RRL7 71 aa1.95□□□□□ -2.1
WHAMM-202ENST00000560964 H0YAA0 97 aa1.95□□□□□ -2.1
WHAMM-202ENST00000560964 ZZEF1O43149 2961 aa1.95□□□□□ -2.1
WHAMM-202ENST00000560964 PRO0255Q9UI72 69 aa1.95□□□□□ -2.1
WHAMM-202ENST00000560964 TLN1Q9Y490 2541 aaKnown RBP1.95□□□□□ -2.1
WHAMM-202ENST00000560964 UBR5O95071 2799 aaPredicted RBP1.95□□□□□ -2.1
WHAMM-202ENST00000560964 DEFB130BP0DP73 79 aa1.94□□□□□ -2.1
WHAMM-202ENST00000560964 DEFB130AP0DP74 79 aa1.94□□□□□ -2.1
WHAMM-202ENST00000560964 MGAQ8IWI9 3026 aa1.94□□□□□ -2.1
WHAMM-202ENST00000560964 VPS13AQ96RL7 3174 aa1.94□□□□□ -2.1
WHAMM-202ENST00000560964 SPRR1AP35321 89 aa1.93□□□□□ -2.1
WHAMM-202ENST00000560964 Q6ZSA8 131 aa1.93□□□□□ -2.1
WHAMM-202ENST00000560964 TENM4Q6N022 2769 aa1.92□□□□□ -2.1
WHAMM-202ENST00000560964 LELP1Q5T871 98 aa1.92□□□□□ -2.1
WHAMM-202ENST00000560964 SPEGQ15772 3267 aa1.92□□□□□ -2.1
WHAMM-202ENST00000560964 FBN1P35555 2871 aaKnown RBP1.92□□□□□ -2.1
WHAMM-202ENST00000560964 FLNAP21333 2647 aaKnown RBP1.91□□□□□ -2.1
WHAMM-202ENST00000560964 PKD1L1Q8TDX9 2849 aa1.91□□□□□ -2.1
WHAMM-202ENST00000560964 FLG2Q5D862 2391 aaPredicted RBP1.91□□□□□ -2.1
WHAMM-202ENST00000560964 ZFYVE26Q68DK2 2539 aa1.91□□□□□ -2.1
WHAMM-202ENST00000560964 XIRP2A4UGR9 3374 aa1.91□□□□□ -2.1
WHAMM-202ENST00000560964 PRRC2CQ9Y520 2896 aaKnown RBP1.91□□□□□ -2.1
WHAMM-202ENST00000560964 KIAA1109Q2LD37 5005 aa1.9□□□□□ -2.1
WHAMM-202ENST00000560964 CSPG4Q6UVK1 2322 aa1.9□□□□□ -2.1
WHAMM-202ENST00000560964 DSPP15924 2871 aaKnown RBP1.9□□□□□ -2.1
WHAMM-202ENST00000560964 H3BNG1 76 aa1.9□□□□□ -2.11
WHAMM-202ENST00000560964 SPRR1BP22528 89 aa1.9□□□□□ -2.11
WHAMM-202ENST00000560964 KRTAP13-4Q3LI77 160 aa1.9□□□□□ -2.11
WHAMM-202ENST00000560964 H1FX-AS1Q4G0G2 97 aa1.9□□□□□ -2.11
WHAMM-202ENST00000560964 DEFB124Q8NES8 71 aa1.9□□□□□ -2.11
WHAMM-202ENST00000560964 GVINP1Q7Z2Y8 2422 aa1.9□□□□□ -2.11
WHAMM-202ENST00000560964 MTORP42345 2549 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 ALMS1Q8TCU4 4167 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 FRYLO94915 3013 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 OTOGLQ3ZCN5 2332 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 LAMA1P25391 3075 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 KRTAP4-1Q9BYQ7 146 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 NBASA2RRP1 2371 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 TRIOO75962 3097 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 TENM1Q9UKZ4 2725 aa1.89□□□□□ -2.11
WHAMM-202ENST00000560964 USP34Q70CQ2 3546 aa1.88□□□□□ -2.11
WHAMM-202ENST00000560964 MUC2Q02817 5179 aa1.88□□□□□ -2.11
WHAMM-202ENST00000560964 RELNP78509 3460 aa1.87□□□□□ -2.11
WHAMM-202ENST00000560964 HIVEP3Q5T1R4 2406 aa1.87□□□□□ -2.11
WHAMM-202ENST00000560964 DNHD1Q96M86 4753 aa1.87□□□□□ -2.11
WHAMM-202ENST00000560964 PDZD2O15018 2839 aa1.86□□□□□ -2.11
WHAMM-202ENST00000560964 TLN2Q9Y4G6 2542 aa1.86□□□□□ -2.11
WHAMM-202ENST00000560964 K7EIL1 84 aa1.86□□□□□ -2.11
WHAMM-202ENST00000560964 HTN3P15516 51 aa1.86□□□□□ -2.11
WHAMM-202ENST00000560964 KRTAP12-3P60328 96 aa1.86□□□□□ -2.11
WHAMM-202ENST00000560964 USP9YO00507 2555 aaPredicted RBP1.85□□□□□ -2.11
WHAMM-202ENST00000560964 AKAP13Q12802 2813 aa1.85□□□□□ -2.11
WHAMM-202ENST00000560964 PRLHP81277 87 aa1.85□□□□□ -2.11
WHAMM-202ENST00000560964 HMCN1Q96RW7 5635 aa1.85□□□□□ -2.11
WHAMM-202ENST00000560964 UTP20O75691 2785 aaKnown RBP1.84□□□□□ -2.11
WHAMM-202ENST00000560964 DCHS1Q96JQ0 3298 aa1.84□□□□□ -2.11
WHAMM-202ENST00000560964 DEFB4AO15263 64 aa1.84□□□□□ -2.11
WHAMM-202ENST00000560964 SPART-AS1P0CW21 52 aa1.84□□□□□ -2.11
WHAMM-202ENST00000560964 Q5VSD8 79 aa1.84□□□□□ -2.11
WHAMM-202ENST00000560964 TACC2O95359 2948 aa1.84□□□□□ -2.11
WHAMM-202ENST00000560964 RIF1Q5UIP0 2472 aaKnown RBP1.84□□□□□ -2.12
WHAMM-202ENST00000560964 MAP1AP78559 2803 aaPredicted RBP1.84□□□□□ -2.12
WHAMM-202ENST00000560964 BOD1L1Q8NFC6 3051 aa1.84□□□□□ -2.12
WHAMM-202ENST00000560964 FREM2Q5SZK8 3169 aa1.83□□□□□ -2.12
WHAMM-202ENST00000560964 ITPR1Q14643 2758 aa1.83□□□□□ -2.12
WHAMM-202ENST00000560964 WDFY3Q8IZQ1 3526 aa1.83□□□□□ -2.12
WHAMM-202ENST00000560964 LAMA3Q16787 3333 aa1.83□□□□□ -2.12
WHAMM-202ENST00000560964 DEFB135Q30KP9 77 aa1.82□□□□□ -2.12
WHAMM-202ENST00000560964 LINC01556Q5JQF7 62 aa1.82□□□□□ -2.12
WHAMM-202ENST00000560964 CELSR2Q9HCU4 2923 aa1.82□□□□□ -2.12
WHAMM-202ENST00000560964 CDH23Q9H251 3354 aa1.82□□□□□ -2.12
WHAMM-202ENST00000560964 ADGRG4Q8IZF6 3080 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms