RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 MMP24-AS1A0A0U1RRL7 71 aa1.49□□□□□ -2.17
SPG11-223ENST00000560858 A8MWP4 228 aa1.49□□□□□ -2.17
SPG11-223ENST00000560858 PRB2P02812 416 aaPredicted RBP1.49□□□□□ -2.17
SPG11-223ENST00000560858 ASB16-AS1Q495Z4 193 aa1.49□□□□□ -2.17
SPG11-223ENST00000560858 KRTAP13-1Q8IUC0 172 aa1.49□□□□□ -2.17
SPG11-223ENST00000560858 PRR15Q8IV56 129 aa1.49□□□□□ -2.17
SPG11-223ENST00000560858 C9orf163Q8N9P6 203 aa1.49□□□□□ -2.17
SPG11-223ENST00000560858 LINC00472Q9H8W2 130 aa1.49□□□□□ -2.17
SPG11-223ENST00000560858 F8P00451 2351 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 A0A0G2JQZ4 141 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 A0A1W2PNN7 141 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 H0Y9P7 68 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 K7EIL1 84 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 UBE2AP49459 152 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 MP68P56378 58 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 RPL37AP61513 92 aaKnown RBP1.48□□□□□ -2.17
SPG11-223ENST00000560858 MOBPQ13875 183 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 CASC2Q6XLA1 102 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 WFDC13Q8IUB5 93 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 BRK1Q8WUW1 75 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 Q96NJ1 140 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 V9GYY9 64 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 DNAH6Q9C0G6 4158 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 PKD1L1Q8TDX9 2849 aa1.48□□□□□ -2.17
SPG11-223ENST00000560858 IGKV2-24A0A0C4DH68 120 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 LRCOL1A6NCL2 159 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 CHTF8P0CG12 524 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 LINC00483Q53H64 154 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 C1orf195Q5TG92 126 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 Q5VV11 94 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 Q6ZRN7 208 aaPredicted RBP1.47□□□□□ -2.17
SPG11-223ENST00000560858 PHF5AQ7RTV0 110 aaKnown RBP1.47□□□□□ -2.17
SPG11-223ENST00000560858 LINC00208Q96KT6 92 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 B9D2Q9BPU9 175 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 APLNQ9ULZ1 77 aa1.47□□□□□ -2.17
SPG11-223ENST00000560858 LOC101927531A0A1B0GV80 90 aa1.46□□□□□ -2.18
SPG11-223ENST00000560858 DEFB116Q30KQ4 102 aa1.46□□□□□ -2.18
SPG11-223ENST00000560858 SPACA4Q8TDM5 124 aa1.46□□□□□ -2.18
SPG11-223ENST00000560858 TP53AIP1Q9HCN2 124 aa1.46□□□□□ -2.18
SPG11-223ENST00000560858 PLAC8Q9NZF1 115 aa1.46□□□□□ -2.18
SPG11-223ENST00000560858 MAST4O15021 2626 aa1.46□□□□□ -2.18
SPG11-223ENST00000560858 BAHCC1Q9P281 2608 aa1.46□□□□□ -2.18
SPG11-223ENST00000560858 HECTD1Q9ULT8 2610 aa1.46□□□□□ -2.18
SPG11-223ENST00000560858 DNAH7Q8WXX0 4024 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 DNAH10Q8IVF4 4471 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 A0A1B0GVX0 72 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 A8MUN3 132 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 PANO1I0J062 215 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 PRR4Q16378 134 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 Q75L30 129 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 COA5Q86WW8 74 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 UBE2DNLQ8IWF7 75 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 LIMD2Q9BT23 127 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 C8orf17Q9NRJ1 99 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 ZNF706Q9Y5V0 76 aaPredicted RBP1.45□□□□□ -2.18
SPG11-223ENST00000560858 PRKDCP78527 4128 aaKnown RBP1.45□□□□□ -2.18
SPG11-223ENST00000560858 DNAH9Q9NYC9 4486 aa1.45□□□□□ -2.18
SPG11-223ENST00000560858 ALMS1Q8TCU4 4167 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 HECTD4Q9Y4D8 3996 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 NBDYA0A0U1RRE5 68 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 NUPR2A6NF83 97 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 PSPHP1O15172 72 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 CD164Q04900 197 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 LCE3DQ9BYE3 92 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 LINC01558Q9Y6Z2 57 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 DNAH17Q9UFH2 4485 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 FLNBO75369 2602 aaKnown RBP1.44□□□□□ -2.18
SPG11-223ENST00000560858 STAB1Q9NY15 2570 aa1.44□□□□□ -2.18
SPG11-223ENST00000560858 VPS13DQ5THJ4 4388 aa1.43□□□□□ -2.18
SPG11-223ENST00000560858 TENM2Q9NT68 2774 aa1.43□□□□□ -2.18
SPG11-223ENST00000560858 LYSTQ99698 3801 aa1.43□□□□□ -2.18
SPG11-223ENST00000560858 MRPL34Q9BQ48 92 aaKnown RBP1.43□□□□□ -2.18
SPG11-223ENST00000560858 PRR15LQ9BU68 103 aa1.43□□□□□ -2.18
SPG11-223ENST00000560858 STARD9Q9P2P6 4700 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 A0A087WTM6 91 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 IGLV9-49A0A0B4J1Y8 123 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 C8orf87E5RJ46 101 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 ZNF861PO60384 105 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 HRES1P13985 223 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 PMAIP1Q13794 54 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 CDC42SE1Q9NRR8 79 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 PSORS1C2Q9UIG4 136 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 PLECQ15149 4684 aaKnown RBP1.42□□□□□ -2.18
SPG11-223ENST00000560858 NOTCH1P46531 2555 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 STAB2Q8WWQ8 2551 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 NBEAL1Q6ZS30 2694 aa1.42□□□□□ -2.18
SPG11-223ENST00000560858 FBN1P35555 2871 aaKnown RBP1.41□□□□□ -2.18
SPG11-223ENST00000560858 IGHV6-1A0A0B4J1U7 121 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 A6NN06 94 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 CHKB-CPT1BH3BT56 60 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 PCOTHQ58A44 107 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 ATP11AUNQ6ZP68 121 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 LCA10Q71F78 164 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 KTN1-AS1Q86SY8 53 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 DMAC1Q96GE9 116 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 PRAC1Q96KF2 57 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
SPG11-223ENST00000560858 FRAS1Q86XX4 4008 aa1.4□□□□□ -2.18
SPG11-223ENST00000560858 DNAH8Q96JB1 4490 aa1.4□□□□□ -2.19
SPG11-223ENST00000560858 A6NED7 52 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms