RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 JMJD7-PLA2G4BH0Y9G9 81 aa3.99□□□□□ -1.77
CTDSPL2-210ENST00000560834 RBM3P98179 157 aaKnown RBP3.99□□□□□ -1.77
CTDSPL2-210ENST00000560834 Q5XG85 94 aa3.99□□□□□ -1.77
CTDSPL2-210ENST00000560834 LIMD2Q9BT23 127 aa3.99□□□□□ -1.77
CTDSPL2-210ENST00000560834 LOC110117498A0A087WWA1 95 aa3.98□□□□□ -1.77
CTDSPL2-210ENST00000560834 Q6ZQT0 140 aa3.98□□□□□ -1.77
CTDSPL2-210ENST00000560834 TEN1Q86WV5 123 aa3.98□□□□□ -1.77
CTDSPL2-210ENST00000560834 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
CTDSPL2-210ENST00000560834 C14orf132Q9NPU4 83 aa3.98□□□□□ -1.77
CTDSPL2-210ENST00000560834 LPAP08519 4548 aa3.97□□□□□ -1.77
CTDSPL2-210ENST00000560834 CCKP06307 115 aa3.97□□□□□ -1.77
CTDSPL2-210ENST00000560834 DSCR8Q96T75 97 aa3.97□□□□□ -1.77
CTDSPL2-210ENST00000560834 A0A087WSZ3 146 aa3.96□□□□□ -1.78
CTDSPL2-210ENST00000560834 F8W1H4 67 aa3.96□□□□□ -1.78
CTDSPL2-210ENST00000560834 ASB16-AS1Q495Z4 193 aa3.96□□□□□ -1.78
CTDSPL2-210ENST00000560834 Q75L30 129 aa3.96□□□□□ -1.78
CTDSPL2-210ENST00000560834 VPS25Q9BRG1 176 aa3.95□□□□□ -1.78
CTDSPL2-210ENST00000560834 PDE6GP18545 87 aa3.94□□□□□ -1.78
CTDSPL2-210ENST00000560834 C1orf195Q5TG92 126 aa3.94□□□□□ -1.78
CTDSPL2-210ENST00000560834 FP248Q71RG6 208 aaPredicted RBP3.94□□□□□ -1.78
CTDSPL2-210ENST00000560834 Q96NJ1 140 aa3.94□□□□□ -1.78
CTDSPL2-210ENST00000560834 SS18L2Q9UHA2 77 aa3.94□□□□□ -1.78
CTDSPL2-210ENST00000560834 PRR4Q16378 134 aa3.93□□□□□ -1.78
CTDSPL2-210ENST00000560834 ETDBQ3ZM63 59 aa3.93□□□□□ -1.78
CTDSPL2-210ENST00000560834 LRP2P98164 4655 aa3.92□□□□□ -1.78
CTDSPL2-210ENST00000560834 IGLV7-46A0A075B6I9 117 aa3.91□□□□□ -1.78
CTDSPL2-210ENST00000560834 A0A1B0GW54 56 aa3.91□□□□□ -1.78
CTDSPL2-210ENST00000560834 TPRXLQ17RH7 258 aa3.9□□□□□ -1.79
CTDSPL2-210ENST00000560834 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
CTDSPL2-210ENST00000560834 LINC00472Q9H8W2 130 aa3.9□□□□□ -1.79
CTDSPL2-210ENST00000560834 MUC17Q685J3 4493 aa3.88□□□□□ -1.79
CTDSPL2-210ENST00000560834 DEFB116Q30KQ4 102 aa3.87□□□□□ -1.79
CTDSPL2-210ENST00000560834 SIGMAR1Q99720 223 aa3.87□□□□□ -1.79
CTDSPL2-210ENST00000560834 LINC00846Q9NV44 126 aa3.87□□□□□ -1.79
CTDSPL2-210ENST00000560834 IGKV4-1P06312 121 aa3.86□□□□□ -1.79
CTDSPL2-210ENST00000560834 Q6ZVQ6 151 aa3.86□□□□□ -1.79
CTDSPL2-210ENST00000560834 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
CTDSPL2-210ENST00000560834 FAM240AA0A1B0GVK7 77 aa3.84□□□□□ -1.79
CTDSPL2-210ENST00000560834 J3KT08 172 aa3.84□□□□□ -1.79
CTDSPL2-210ENST00000560834 NREPQ16612 68 aa3.84□□□□□ -1.79
CTDSPL2-210ENST00000560834 DSCR10P59022 87 aa3.83□□□□□ -1.8
CTDSPL2-210ENST00000560834 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
CTDSPL2-210ENST00000560834 IGKV3D-7A0A0C4DH55 119 aa3.82□□□□□ -1.8
CTDSPL2-210ENST00000560834 A0A1B0GVX0 72 aa3.82□□□□□ -1.8
CTDSPL2-210ENST00000560834 A8MWP4 228 aa3.82□□□□□ -1.8
CTDSPL2-210ENST00000560834 UBL5Q9BZL1 73 aa3.82□□□□□ -1.8
CTDSPL2-210ENST00000560834 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
CTDSPL2-210ENST00000560834 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
CTDSPL2-210ENST00000560834 K7EQZ3 153 aa3.81□□□□□ -1.8
CTDSPL2-210ENST00000560834 BPY2O14599 106 aa3.81□□□□□ -1.8
CTDSPL2-210ENST00000560834 ACYP1P07311 99 aa3.81□□□□□ -1.8
CTDSPL2-210ENST00000560834 NOTCH2NLQ7Z3S9 236 aa3.81□□□□□ -1.8
CTDSPL2-210ENST00000560834 IGHV6-1A0A0B4J1U7 121 aa3.8□□□□□ -1.8
CTDSPL2-210ENST00000560834 MMP24-AS1A0A0U1RRL7 71 aa3.79□□□□□ -1.8
CTDSPL2-210ENST00000560834 C8orf87E5RJ46 101 aa3.79□□□□□ -1.8
CTDSPL2-210ENST00000560834 PRR15Q8IV56 129 aa3.79□□□□□ -1.8
CTDSPL2-210ENST00000560834 Q8N9L7 120 aa3.79□□□□□ -1.8
CTDSPL2-210ENST00000560834 NDUFB1O75438 58 aa3.78□□□□□ -1.8
CTDSPL2-210ENST00000560834 LINC00313P59037 77 aa3.78□□□□□ -1.8
CTDSPL2-210ENST00000560834 RPL37P61927 97 aaKnown RBP3.78□□□□□ -1.8
CTDSPL2-210ENST00000560834 C20orf166-AS1Q96NR2 134 aa3.78□□□□□ -1.8
CTDSPL2-210ENST00000560834 C8orf17Q9NRJ1 99 aa3.78□□□□□ -1.8
CTDSPL2-210ENST00000560834 A8MUU9 505 aa3.77□□□□□ -1.81
CTDSPL2-210ENST00000560834 CXCL6P80162 114 aa3.77□□□□□ -1.81
CTDSPL2-210ENST00000560834 J3QR89 54 aa3.76□□□□□ -1.81
CTDSPL2-210ENST00000560834 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
CTDSPL2-210ENST00000560834 ATP5EP2Q5VTU8 51 aa3.76□□□□□ -1.81
CTDSPL2-210ENST00000560834 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
CTDSPL2-210ENST00000560834 IGKV2-30P06310 120 aa3.74□□□□□ -1.81
CTDSPL2-210ENST00000560834 LINC00643Q86TS7 51 aa3.74□□□□□ -1.81
CTDSPL2-210ENST00000560834 Q8N9P0 234 aaPredicted RBP3.74□□□□□ -1.81
CTDSPL2-210ENST00000560834 TMEM254Q8TBM7 123 aa3.74□□□□□ -1.81
CTDSPL2-210ENST00000560834 hDV103S1A0JD37 113 aa3.73□□□□□ -1.81
CTDSPL2-210ENST00000560834 K7ERU9 68 aa3.73□□□□□ -1.81
CTDSPL2-210ENST00000560834 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
CTDSPL2-210ENST00000560834 KRTAP4-1Q9BYQ7 146 aa3.73□□□□□ -1.81
CTDSPL2-210ENST00000560834 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
CTDSPL2-210ENST00000560834 WFDC13Q8IUB5 93 aa3.72□□□□□ -1.81
CTDSPL2-210ENST00000560834 MRPL34Q9BQ48 92 aaKnown RBP3.72□□□□□ -1.81
CTDSPL2-210ENST00000560834 MUC2Q02817 5179 aa3.71□□□□□ -1.82
CTDSPL2-210ENST00000560834 CASC2Q6XLA1 102 aa3.71□□□□□ -1.82
CTDSPL2-210ENST00000560834 A0A087WVE0 104 aa3.69□□□□□ -1.82
CTDSPL2-210ENST00000560834 HIST1H4AP62805 103 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-210ENST00000560834 ATP11AUNQ6ZP68 121 aa3.68□□□□□ -1.82
CTDSPL2-210ENST00000560834 ZCCHC13Q8WW36 166 aaKnown RBP3.68□□□□□ -1.82
CTDSPL2-210ENST00000560834 MT-ATP8P03928 68 aa3.67□□□□□ -1.82
CTDSPL2-210ENST00000560834 NDUFS5O43920 106 aa3.66□□□□□ -1.82
CTDSPL2-210ENST00000560834 Q5W150 140 aa3.64□□□□□ -1.83
CTDSPL2-210ENST00000560834 KRTAP19-2Q3LHN2 52 aa3.63□□□□□ -1.83
CTDSPL2-210ENST00000560834 IMUPQ9GZP8 106 aa3.63□□□□□ -1.83
CTDSPL2-210ENST00000560834 KRTAP5-9P26371 169 aa3.62□□□□□ -1.83
CTDSPL2-210ENST00000560834 FAT4Q6V0I7 4981 aa3.62□□□□□ -1.83
CTDSPL2-210ENST00000560834 HRES1P13985 223 aa3.61□□□□□ -1.83
CTDSPL2-210ENST00000560834 TP53AIP1Q9HCN2 124 aa3.61□□□□□ -1.83
CTDSPL2-210ENST00000560834 SPINK7P58062 85 aa3.6□□□□□ -1.83
CTDSPL2-210ENST00000560834 OCR1Q9BZK8 76 aa3.6□□□□□ -1.83
CTDSPL2-210ENST00000560834 FLGP20930 4061 aaPredicted RBP3.6□□□□□ -1.83
CTDSPL2-210ENST00000560834 TRAV22A0A0B4J277 110 aa3.59□□□□□ -1.83
CTDSPL2-210ENST00000560834 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.83
CTDSPL2-210ENST00000560834 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms