RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 C4orf48Q5BLP8 95 aa5.45□□□□□ -1.54
TPM1-225ENST00000560679 DEFB105AQ8NG35 78 aa5.45□□□□□ -1.54
TPM1-225ENST00000560679 HIGD2AQ9BW72 106 aa5.45□□□□□ -1.54
TPM1-225ENST00000560679 SPINK1P00995 79 aa5.44□□□□□ -1.54
TPM1-225ENST00000560679 ST20-AS1Q8NBB2 130 aa5.44□□□□□ -1.54
TPM1-225ENST00000560679 HIST1H4AP62805 103 aaKnown RBP5.43□□□□□ -1.54
TPM1-225ENST00000560679 Q6ZVQ6 151 aa5.43□□□□□ -1.54
TPM1-225ENST00000560679 FCGBPQ9Y6R7 5405 aaPredicted RBP5.41□□□□□ -1.54
TPM1-225ENST00000560679 IGLV8-61A0A075B6I0 122 aa5.4□□□□□ -1.54
TPM1-225ENST00000560679 A0A1B0GW54 56 aa5.4□□□□□ -1.54
TPM1-225ENST00000560679 PCOTHQ58A44 107 aa5.4□□□□□ -1.54
TPM1-225ENST00000560679 A0A087WVE0 104 aa5.39□□□□□ -1.55
TPM1-225ENST00000560679 F8WEM9 126 aa5.39□□□□□ -1.55
TPM1-225ENST00000560679 ATOX1O00244 68 aa5.39□□□□□ -1.55
TPM1-225ENST00000560679 RPS29P62273 56 aaKnown RBP5.39□□□□□ -1.55
TPM1-225ENST00000560679 CXCL6P80162 114 aa5.39□□□□□ -1.55
TPM1-225ENST00000560679 SMIM29Q86T20 159 aa5.39□□□□□ -1.55
TPM1-225ENST00000560679 ZNF706Q9Y5V0 76 aaPredicted RBP5.39□□□□□ -1.55
TPM1-225ENST00000560679 LINC00483Q53H64 154 aa5.38□□□□□ -1.55
TPM1-225ENST00000560679 A0A1W2PNM2 257 aa5.37□□□□□ -1.55
TPM1-225ENST00000560679 M0R2T5 61 aa5.37□□□□□ -1.55
TPM1-225ENST00000560679 SPRR1BP22528 89 aa5.37□□□□□ -1.55
TPM1-225ENST00000560679 MOBPQ13875 183 aa5.37□□□□□ -1.55
TPM1-225ENST00000560679 CCDC179H3BU77 68 aa5.36□□□□□ -1.55
TPM1-225ENST00000560679 NREPQ16612 68 aa5.35□□□□□ -1.55
TPM1-225ENST00000560679 IGLV9-49A0A0B4J1Y8 123 aa5.34□□□□□ -1.55
TPM1-225ENST00000560679 COX7CP15954 63 aa5.33□□□□□ -1.56
TPM1-225ENST00000560679 IGFL1Q6UW32 110 aa5.33□□□□□ -1.56
TPM1-225ENST00000560679 BPY2O14599 106 aa5.32□□□□□ -1.56
TPM1-225ENST00000560679 UQCRQO14949 82 aa5.32□□□□□ -1.56
TPM1-225ENST00000560679 SSBP3-AS1Q7Z2R9 100 aa5.32□□□□□ -1.56
TPM1-225ENST00000560679 SERP2Q8N6R1 65 aa5.32□□□□□ -1.56
TPM1-225ENST00000560679 C9orf92A6NGG3 77 aa5.31□□□□□ -1.56
TPM1-225ENST00000560679 IGKV4-1P06312 121 aa5.3□□□□□ -1.56
TPM1-225ENST00000560679 C9orf153Q5TBE3 101 aa5.29□□□□□ -1.56
TPM1-225ENST00000560679 SMIM20Q8N5G0 67 aa5.29□□□□□ -1.56
TPM1-225ENST00000560679 SYNE2Q8WXH0 6885 aaKnown RBP5.29□□□□□ -1.56
TPM1-225ENST00000560679 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
TPM1-225ENST00000560679 MACF1Q9UPN3 7388 aaKnown RBP5.28□□□□□ -1.56
TPM1-225ENST00000560679 TRAV7A0A075B6U4 112 aa5.27□□□□□ -1.57
TPM1-225ENST00000560679 A0A0G2JQZ4 141 aa5.27□□□□□ -1.57
TPM1-225ENST00000560679 Q8N9L7 120 aa5.27□□□□□ -1.57
TPM1-225ENST00000560679 A0A087WSZ3 146 aa5.26□□□□□ -1.57
TPM1-225ENST00000560679 DSCR10P59022 87 aa5.24□□□□□ -1.57
TPM1-225ENST00000560679 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
TPM1-225ENST00000560679 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
TPM1-225ENST00000560679 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
TPM1-225ENST00000560679 K7EQZ3 153 aa5.21□□□□□ -1.58
TPM1-225ENST00000560679 SS18L2Q9UHA2 77 aa5.21□□□□□ -1.58
TPM1-225ENST00000560679 HRCT1Q6UXD1 115 aa5.2□□□□□ -1.58
TPM1-225ENST00000560679 LIMD2Q9BT23 127 aa5.2□□□□□ -1.58
TPM1-225ENST00000560679 C20orf197Q8N268 126 aa5.19□□□□□ -1.58
TPM1-225ENST00000560679 LINC00472Q9H8W2 130 aa5.19□□□□□ -1.58
TPM1-225ENST00000560679 HCG22E2RYF7 251 aa5.18□□□□□ -1.58
TPM1-225ENST00000560679 J3KT08 172 aa5.18□□□□□ -1.58
TPM1-225ENST00000560679 OCR1Q9BZK8 76 aa5.18□□□□□ -1.58
TPM1-225ENST00000560679 CYSTM1Q9H1C7 97 aa5.18□□□□□ -1.58
TPM1-225ENST00000560679 TMEM258P61165 79 aa5.17□□□□□ -1.58
TPM1-225ENST00000560679 DEFB116Q30KQ4 102 aa5.17□□□□□ -1.58
TPM1-225ENST00000560679 A8MWP4 228 aa5.16□□□□□ -1.58
TPM1-225ENST00000560679 LCE2BO14633 110 aa5.16□□□□□ -1.58
TPM1-225ENST00000560679 KLKP1Q107X0 134 aa5.16□□□□□ -1.58
TPM1-225ENST00000560679 PRR15Q8IV56 129 aa5.15□□□□□ -1.59
TPM1-225ENST00000560679 Q96NJ1 140 aa5.14□□□□□ -1.59
TPM1-225ENST00000560679 CD164Q04900 197 aa5.13□□□□□ -1.59
TPM1-225ENST00000560679 C1orf195Q5TG92 126 aa5.13□□□□□ -1.59
TPM1-225ENST00000560679 TMEM254Q8TBM7 123 aa5.13□□□□□ -1.59
TPM1-225ENST00000560679 NDUFC1O43677 76 aa5.12□□□□□ -1.59
TPM1-225ENST00000560679 NDUFB1O75438 58 aa5.12□□□□□ -1.59
TPM1-225ENST00000560679 MT2AP02795 61 aa5.12□□□□□ -1.59
TPM1-225ENST00000560679 WFDC13Q8IUB5 93 aa5.12□□□□□ -1.59
TPM1-225ENST00000560679 SNURFQ9Y675 71 aa5.12□□□□□ -1.59
TPM1-225ENST00000560679 H7BZZ5 65 aa5.11□□□□□ -1.59
TPM1-225ENST00000560679 CASC2Q6XLA1 102 aa5.11□□□□□ -1.59
TPM1-225ENST00000560679 MMP24-AS1A0A0U1RRL7 71 aa5.1□□□□□ -1.59
TPM1-225ENST00000560679 Q5XG85 94 aa5.1□□□□□ -1.59
TPM1-225ENST00000560679 FAM236DA0A1B0GTK5 79 aa5.09□□□□□ -1.59
TPM1-225ENST00000560679 MT1FP04733 61 aa5.09□□□□□ -1.59
TPM1-225ENST00000560679 FAM236CP0DP71 79 aa5.09□□□□□ -1.59
TPM1-225ENST00000560679 A0A1B0GVX0 72 aa5.08□□□□□ -1.6
TPM1-225ENST00000560679 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
TPM1-225ENST00000560679 C5orf47Q569G3 176 aa5.07□□□□□ -1.6
TPM1-225ENST00000560679 C8orf17Q9NRJ1 99 aa5.07□□□□□ -1.6
TPM1-225ENST00000560679 ATP5EP56381 51 aaPredicted RBP5.06□□□□□ -1.6
TPM1-225ENST00000560679 hDV103S1A0JD37 113 aa5.05□□□□□ -1.6
TPM1-225ENST00000560679 MP68P56378 58 aa5.05□□□□□ -1.6
TPM1-225ENST00000560679 RPS28P62857 69 aaKnown RBP5.05□□□□□ -1.6
TPM1-225ENST00000560679 ZCCHC13Q8WW36 166 aaKnown RBP5.05□□□□□ -1.6
TPM1-225ENST00000560679 IGHV6-1A0A0B4J1U7 121 aa5.04□□□□□ -1.6
TPM1-225ENST00000560679 NEBP20929 6669 aa5.04□□□□□ -1.6
TPM1-225ENST00000560679 H3BPC8 53 aa5.03□□□□□ -1.6
TPM1-225ENST00000560679 H0Y9P7 68 aa5.02□□□□□ -1.61
TPM1-225ENST00000560679 Q75L30 129 aa5.02□□□□□ -1.61
TPM1-225ENST00000560679 SERP1Q9Y6X1 66 aa5.02□□□□□ -1.61
TPM1-225ENST00000560679 KRTAP6-3Q3LI67 103 aa5.01□□□□□ -1.61
TPM1-225ENST00000560679 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
TPM1-225ENST00000560679 TP53AIP1Q9HCN2 124 aa5.01□□□□□ -1.61
TPM1-225ENST00000560679 C8orf87E5RJ46 101 aa5□□□□□ -1.61
TPM1-225ENST00000560679 ATP11AUNQ6ZP68 121 aa5□□□□□ -1.61
TPM1-225ENST00000560679 MRPL34Q9BQ48 92 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms