RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 C9orf118A6NHY6 69 aa6.77□□□□□ -1.33
CTDSPL2-209ENST00000560620 PDE6GP18545 87 aa6.77□□□□□ -1.33
CTDSPL2-209ENST00000560620 Q6ZQT0 140 aa6.77□□□□□ -1.33
CTDSPL2-209ENST00000560620 NOTCH2NLQ7Z3S9 236 aa6.77□□□□□ -1.33
CTDSPL2-209ENST00000560620 LOC110117498A0A087WWA1 95 aa6.76□□□□□ -1.33
CTDSPL2-209ENST00000560620 J3KT08 172 aa6.76□□□□□ -1.33
CTDSPL2-209ENST00000560620 M0R2T5 61 aa6.76□□□□□ -1.33
CTDSPL2-209ENST00000560620 MT1HP80294 61 aa6.76□□□□□ -1.33
CTDSPL2-209ENST00000560620 KRTAP9-2Q9BYQ4 174 aa6.76□□□□□ -1.33
CTDSPL2-209ENST00000560620 A0A1B0GVX0 72 aa6.75□□□□□ -1.33
CTDSPL2-209ENST00000560620 A0A1W2PPM0 123 aa6.75□□□□□ -1.33
CTDSPL2-209ENST00000560620 TAX1BP3O14907 124 aa6.75□□□□□ -1.33
CTDSPL2-209ENST00000560620 C8orf87E5RJ46 101 aa6.74□□□□□ -1.33
CTDSPL2-209ENST00000560620 NDUFB1O75438 58 aa6.74□□□□□ -1.33
CTDSPL2-209ENST00000560620 MTURNQ8N3F0 131 aa6.74□□□□□ -1.33
CTDSPL2-209ENST00000560620 KRTAP16-1A8MUX0 517 aa6.73□□□□□ -1.33
CTDSPL2-209ENST00000560620 A0A1B0GW54 56 aa6.72□□□□□ -1.33
CTDSPL2-209ENST00000560620 H3BT86 120 aa6.71□□□□□ -1.34
CTDSPL2-209ENST00000560620 NREPQ16612 68 aa6.7□□□□□ -1.34
CTDSPL2-209ENST00000560620 SPCS1Q9Y6A9 102 aa6.68□□□□□ -1.34
CTDSPL2-209ENST00000560620 A8MWP4 228 aa6.67□□□□□ -1.34
CTDSPL2-209ENST00000560620 COL5A1-AS1Q5SY13 56 aa6.65□□□□□ -1.34
CTDSPL2-209ENST00000560620 FAM236DA0A1B0GTK5 79 aa6.64□□□□□ -1.35
CTDSPL2-209ENST00000560620 FAM236CP0DP71 79 aa6.64□□□□□ -1.35
CTDSPL2-209ENST00000560620 C8orf17Q9NRJ1 99 aa6.64□□□□□ -1.35
CTDSPL2-209ENST00000560620 IGKV3D-7A0A0C4DH55 119 aa6.63□□□□□ -1.35
CTDSPL2-209ENST00000560620 KRTAP10-6P60371 365 aaPredicted RBP6.62□□□□□ -1.35
CTDSPL2-209ENST00000560620 ZCCHC13Q8WW36 166 aaKnown RBP6.61□□□□□ -1.35
CTDSPL2-209ENST00000560620 RBM12B-AS1Q9P1G2 102 aa6.61□□□□□ -1.35
CTDSPL2-209ENST00000560620 Q6ZVQ6 151 aa6.6□□□□□ -1.35
CTDSPL2-209ENST00000560620 PRR15Q8IV56 129 aa6.6□□□□□ -1.35
CTDSPL2-209ENST00000560620 A0A1B0GV90 55 aa6.59□□□□□ -1.35
CTDSPL2-209ENST00000560620 LCE2BO14633 110 aa6.59□□□□□ -1.35
CTDSPL2-209ENST00000560620 LORP23490 312 aaPredicted RBP6.59□□□□□ -1.35
CTDSPL2-209ENST00000560620 BPY2O14599 106 aa6.58□□□□□ -1.36
CTDSPL2-209ENST00000560620 Q8N9P0 234 aaPredicted RBP6.58□□□□□ -1.36
CTDSPL2-209ENST00000560620 K7EP34 96 aa6.56□□□□□ -1.36
CTDSPL2-209ENST00000560620 K7EQZ3 153 aa6.56□□□□□ -1.36
CTDSPL2-209ENST00000560620 SMCPP49901 116 aaPredicted RBP6.56□□□□□ -1.36
CTDSPL2-209ENST00000560620 NDUFS5O43920 106 aa6.55□□□□□ -1.36
CTDSPL2-209ENST00000560620 HRES1P13985 223 aa6.55□□□□□ -1.36
CTDSPL2-209ENST00000560620 SPINK7P58062 85 aa6.55□□□□□ -1.36
CTDSPL2-209ENST00000560620 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-209ENST00000560620 MMP24-AS1A0A0U1RRL7 71 aa6.54□□□□□ -1.36
CTDSPL2-209ENST00000560620 hDV103S1A0JD37 113 aa6.54□□□□□ -1.36
CTDSPL2-209ENST00000560620 MRPL34Q9BQ48 92 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-209ENST00000560620 TMEM254Q8TBM7 123 aa6.53□□□□□ -1.36
CTDSPL2-209ENST00000560620 GTF2H5Q6ZYL4 71 aa6.52□□□□□ -1.37
CTDSPL2-209ENST00000560620 KRTAP9-6A0A140TA67 174 aa6.51□□□□□ -1.37
CTDSPL2-209ENST00000560620 Q8N9L7 120 aa6.5□□□□□ -1.37
CTDSPL2-209ENST00000560620 MPLKIPQ8TAP9 179 aa6.5□□□□□ -1.37
CTDSPL2-209ENST00000560620 UBL5Q9BZL1 73 aa6.5□□□□□ -1.37
CTDSPL2-209ENST00000560620 PRO0461Q9UI25 63 aa6.5□□□□□ -1.37
CTDSPL2-209ENST00000560620 WFDC13Q8IUB5 93 aa6.49□□□□□ -1.37
CTDSPL2-209ENST00000560620 FSIP2Q5CZC0 6907 aa6.48□□□□□ -1.37
CTDSPL2-209ENST00000560620 LINC00846Q9NV44 126 aa6.47□□□□□ -1.37
CTDSPL2-209ENST00000560620 CASC2Q6XLA1 102 aa6.46□□□□□ -1.38
CTDSPL2-209ENST00000560620 F8W1H4 67 aa6.45□□□□□ -1.38
CTDSPL2-209ENST00000560620 HCG22E2RYF7 251 aa6.42□□□□□ -1.38
CTDSPL2-209ENST00000560620 ETDBQ3ZM63 59 aa6.42□□□□□ -1.38
CTDSPL2-209ENST00000560620 IGKV2D-30A0A075B6S6 120 aa6.41□□□□□ -1.38
CTDSPL2-209ENST00000560620 IGKV2-30P06310 120 aa6.41□□□□□ -1.38
CTDSPL2-209ENST00000560620 CRCT1Q9UGL9 99 aa6.41□□□□□ -1.38
CTDSPL2-209ENST00000560620 KRTAP9-8Q9BYQ0 159 aa6.39□□□□□ -1.39
CTDSPL2-209ENST00000560620 Q5W150 140 aa6.37□□□□□ -1.39
CTDSPL2-209ENST00000560620 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
CTDSPL2-209ENST00000560620 CXCL6P80162 114 aa6.36□□□□□ -1.39
CTDSPL2-209ENST00000560620 MT2AP02795 61 aa6.33□□□□□ -1.4
CTDSPL2-209ENST00000560620 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
CTDSPL2-209ENST00000560620 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
CTDSPL2-209ENST00000560620 MT1FP04733 61 aa6.28□□□□□ -1.4
CTDSPL2-209ENST00000560620 ACYP1P07311 99 aa6.27□□□□□ -1.41
CTDSPL2-209ENST00000560620 SCGB1A1P11684 91 aa6.27□□□□□ -1.41
CTDSPL2-209ENST00000560620 C4orf26Q17RF5 130 aa6.27□□□□□ -1.41
CTDSPL2-209ENST00000560620 TP53AIP1Q9HCN2 124 aa6.26□□□□□ -1.41
CTDSPL2-209ENST00000560620 FAM240AA0A1B0GVK7 77 aa6.22□□□□□ -1.41
CTDSPL2-209ENST00000560620 HIST1H4AP62805 103 aaKnown RBP6.22□□□□□ -1.41
CTDSPL2-209ENST00000560620 K7ERU9 68 aa6.2□□□□□ -1.42
CTDSPL2-209ENST00000560620 ATP5EP2Q5VTU8 51 aa6.2□□□□□ -1.42
CTDSPL2-209ENST00000560620 USH2AO75445 5202 aa6.2□□□□□ -1.42
CTDSPL2-209ENST00000560620 KRTAP9-3Q9BYQ3 159 aa6.18□□□□□ -1.42
CTDSPL2-209ENST00000560620 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
CTDSPL2-209ENST00000560620 C1orf64Q8NEQ6 169 aa6.16□□□□□ -1.42
CTDSPL2-209ENST00000560620 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
CTDSPL2-209ENST00000560620 TRAV22A0A0B4J277 110 aa6.15□□□□□ -1.42
CTDSPL2-209ENST00000560620 C5orf47Q569G3 176 aa6.14□□□□□ -1.43
CTDSPL2-209ENST00000560620 SSPOA2VEC9 5147 aa6.12□□□□□ -1.43
CTDSPL2-209ENST00000560620 S4R3F8 94 aa6.12□□□□□ -1.43
CTDSPL2-209ENST00000560620 LINC00643Q86TS7 51 aa6.11□□□□□ -1.43
CTDSPL2-209ENST00000560620 A0A087WVE0 104 aa6.1□□□□□ -1.43
CTDSPL2-209ENST00000560620 LOC101927531A0A1B0GV80 90 aa6.1□□□□□ -1.43
CTDSPL2-209ENST00000560620 KRTAP3-1Q9BYR8 98 aa6.1□□□□□ -1.43
CTDSPL2-209ENST00000560620 CYP4F30PQ9H0H9 118 aa6.1□□□□□ -1.43
CTDSPL2-209ENST00000560620 UQCRQO14949 82 aa6.08□□□□□ -1.44
CTDSPL2-209ENST00000560620 FAM236AA0A1B0GUQ0 79 aa6.07□□□□□ -1.44
CTDSPL2-209ENST00000560620 FAM236BA0A1B0GV22 79 aa6.07□□□□□ -1.44
CTDSPL2-209ENST00000560620 H0Y9P7 68 aa6.07□□□□□ -1.44
CTDSPL2-209ENST00000560620 ATOX1O00244 68 aa6.06□□□□□ -1.44
CTDSPL2-209ENST00000560620 CSAG1Q6PB30 78 aa6.06□□□□□ -1.44
CTDSPL2-209ENST00000560620 LCA10Q71F78 164 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms