RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	FLNB	O75369	2602 aa	Known RBP	0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	CEP250	Q9BV73	2442 aa		0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	TNP1	P09430	55 aa		0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	POLR2K	P53803	58 aa	Known RBP	0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	LELP1	Q5T871	98 aa		0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	NSD1	Q96L73	2696 aa	Predicted RBP	0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	PKD1L1	Q8TDX9	2849 aa		0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	UTP20	O75691	2785 aa	Known RBP	0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	SRRM2	Q9UQ35	2752 aa	Known RBP	0.23	□□□□□ -2.37
SLTM-223	ENST00000560532	MAST4	O15021	2626 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	CACNA1A	O00555	2505 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	ANKHD1	Q8IWZ3	2542 aa	Known RBP	0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	KMT2D	O14686	5537 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	IQGAP1	P46940	1657 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	KRTAP2-3	P0C7H8	128 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	TFF3	Q07654	80 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	KRTAP2-4	Q9BYR9	128 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	KRTAP2-1	Q9BYU5	128 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	FLNC	Q14315	2725 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	CSMD3	Q7Z407	3707 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	NF1	P21359	2839 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	CCDC168	Q8NDH2	2452 aa		0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	SON	P18583	2426 aa	Known RBP	0.22	□□□□□ -2.37
SLTM-223	ENST00000560532	GCC2	Q8IWJ2	1684 aa		0.21	□□□□□ -2.38
SLTM-223	ENST00000560532	USP9X	Q93008	2570 aa	Predicted RBP	0.21	□□□□□ -2.38
SLTM-223	ENST00000560532	SPTBN4	Q9H254	2564 aa		0.21	□□□□□ -2.38
SLTM-223	ENST00000560532	AKAP13	Q12802	2813 aa		0.21	□□□□□ -2.38
SLTM-223	ENST00000560532	DOPEY1	Q5JWR5	2465 aa		0.21	□□□□□ -2.38
SLTM-223	ENST00000560532	ALMS1	Q8TCU4	4167 aa		0.21	□□□□□ -2.38
SLTM-223	ENST00000560532	MROH2B	Q7Z745	1585 aa		0.21	□□□□□ -2.38
SLTM-223	ENST00000560532	LINC01590	Q5TEZ4	76 aa		0.21	□□□□□ -2.38
SLTM-223	ENST00000560532	ANKRD11	Q6UB99	2663 aa	Predicted RBP	0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	MYO18B	Q8IUG5	2567 aa		0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	SPART-AS1	P0CW21	52 aa		0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	SPRR2D	P22532	72 aa		0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	SPRR2B	P35325	72 aa		0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	CLPSL2	Q6UWE3	100 aa		0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	FASN	P49327	2511 aa	Known RBP	0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	MGAM2	Q2M2H8	2515 aa		0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	TLN2	Q9Y4G6	2542 aa		0.2	□□□□□ -2.38
SLTM-223	ENST00000560532	TEP1	Q99973	2627 aa	Known RBP	0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	NBEA	Q8NFP9	2946 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532		H3BNG1	76 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	SPRR2A	P35326	72 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	TOMM7	Q9P0U1	55 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	COL6A5	A8TX70	2615 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	TG	P01266	2768 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	NBEAL2	Q6ZNJ1	2754 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	USP9Y	O00507	2555 aa	Predicted RBP	0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	DCHS2	Q6V1P9	2916 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532		A0A0C4DFX4	3053 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	ACACB	O00763	2458 aa		0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	SPTAN1	Q13813	2472 aa	Known RBP	0.19	□□□□□ -2.38
SLTM-223	ENST00000560532	ANK2	Q01484	3957 aa		0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	GCN1	Q92616	2671 aa	Known RBP	0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	FRAS1	Q86XX4	4008 aa		0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	ZZEF1	O43149	2961 aa		0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	MT1A	P04731	61 aa		0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	RPL39	P62891	51 aa	Known RBP	0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	ARHGAP5-AS1	Q96IT6	56 aa		0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	TENM2	Q9NT68	2774 aa		0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	TNRC18	O15417	2968 aa	Predicted RBP	0.18	□□□□□ -2.38
SLTM-223	ENST00000560532	NBEAL1	Q6ZS30	2694 aa		0.17	□□□□□ -2.38
SLTM-223	ENST00000560532		H3BUX3	64 aa		0.17	□□□□□ -2.38
SLTM-223	ENST00000560532		K7EIM0	57 aa		0.17	□□□□□ -2.38
SLTM-223	ENST00000560532	PRM1	P04553	51 aa		0.17	□□□□□ -2.38
SLTM-223	ENST00000560532	PRCD	Q00LT1	54 aa		0.17	□□□□□ -2.38
SLTM-223	ENST00000560532	ZAN	Q9Y493	2812 aa		0.17	□□□□□ -2.38
SLTM-223	ENST00000560532	HIVEP1	P15822	2718 aa		0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	COL12A1	Q99715	3063 aa		0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	DEFB110	Q30KQ9	67 aa		0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	KRTAP8-1	Q8IUC2	63 aa		0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	RPL39L	Q96EH5	51 aa	Known RBP	0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	RHPN1-AS1	Q9BWJ2	59 aa		0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	STAB1	Q9NY15	2570 aa		0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	TNXB	P22105	4242 aa		0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	BSN	Q9UPA5	3926 aa		0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	HRNR	Q86YZ3	2850 aa	Predicted RBP	0.16	□□□□□ -2.38
SLTM-223	ENST00000560532	PRKDC	P78527	4128 aa	Known RBP	0.15	□□□□□ -2.38
SLTM-223	ENST00000560532	ITPR1	Q14643	2758 aa		0.15	□□□□□ -2.39
SLTM-223	ENST00000560532	HUWE1	Q7Z6Z7	4374 aa	Known RBP	0.15	□□□□□ -2.39
SLTM-223	ENST00000560532	MYO9A	B2RTY4	2548 aa		0.15	□□□□□ -2.39
SLTM-223	ENST00000560532	COL6A3	P12111	3177 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	MXRA5	Q9NR99	2828 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	TACC2	O95359	2948 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	TEX15	Q9BXT5	2789 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	SPRR2E	P22531	72 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	DEFB136	Q30KP8	78 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	TMEM167A	Q8TBQ9	72 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	FAT2	Q9NYQ8	4349 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	COL7A1	Q02388	2944 aa		0.14	□□□□□ -2.39
SLTM-223	ENST00000560532	KMT2A	Q03164	3969 aa		0.13	□□□□□ -2.39
SLTM-223	ENST00000560532	CELSR1	Q9NYQ6	3014 aa		0.13	□□□□□ -2.39
SLTM-223	ENST00000560532	DMXL1	Q9Y485	3027 aa		0.13	□□□□□ -2.39
SLTM-223	ENST00000560532	RPS29	P62273	56 aa	Known RBP	0.13	□□□□□ -2.39
SLTM-223	ENST00000560532	LEAP2	Q969E1	77 aa		0.13	□□□□□ -2.39
SLTM-223	ENST00000560532	SPRR2F	Q96RM1	72 aa		0.13	□□□□□ -2.39
SLTM-223	ENST00000560532		Q9Y3F1	56 aa		0.13	□□□□□ -2.39
SLTM-223	ENST00000560532	ITPR3	Q14573	2671 aa		0.13	□□□□□ -2.39
SLTM-223	ENST00000560532	FLG	P20930	4061 aa	Predicted RBP	0.13	□□□□□ -2.39

Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms