RNA–Protein interactions for RNA: ENST00000560469.5

PBX1-218, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 1,674 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-218ENST00000560469 CASC2Q6XLA1 102 aa12.92□□□□□ -0.34
PBX1-218ENST00000560469 MMP24-AS1A0A0U1RRL7 71 aa12.9□□□□□ -0.34
PBX1-218ENST00000560469 OCR1Q9BZK8 76 aa12.9□□□□□ -0.34
PBX1-218ENST00000560469 IGHV6-1A0A0B4J1U7 121 aa12.89□□□□□ -0.35
PBX1-218ENST00000560469 C8orf17Q9NRJ1 99 aa12.89□□□□□ -0.35
PBX1-218ENST00000560469 Q8N1X5 172 aa12.87□□□□□ -0.35
PBX1-218ENST00000560469 hDV103S1A0JD37 113 aa12.86□□□□□ -0.35
PBX1-218ENST00000560469 EPPK1P58107 5090 aaKnown RBP12.84□□□□□ -0.35
PBX1-218ENST00000560469 KRTAP17-1Q9BYP8 105 aa12.81□□□□□ -0.36
PBX1-218ENST00000560469 C8orf87E5RJ46 101 aa12.8□□□□□ -0.36
PBX1-218ENST00000560469 KIAA1109Q2LD37 5005 aa12.78□□□□□ -0.36
PBX1-218ENST00000560469 TMEM254Q8TBM7 123 aa12.77□□□□□ -0.37
PBX1-218ENST00000560469 KRTAP10-8P60410 259 aa12.76□□□□□ -0.37
PBX1-218ENST00000560469 C20orf197Q8N268 126 aa12.76□□□□□ -0.37
PBX1-218ENST00000560469 NOTCH2NLQ7Z3S9 236 aa12.75□□□□□ -0.37
PBX1-218ENST00000560469 MRPL34Q9BQ48 92 aaKnown RBP12.73□□□□□ -0.37
PBX1-218ENST00000560469 LINC00313P59037 77 aa12.72□□□□□ -0.37
PBX1-218ENST00000560469 C5orf47Q569G3 176 aa12.7□□□□□ -0.38
PBX1-218ENST00000560469 KLKP1Q107X0 134 aa12.69□□□□□ -0.38
PBX1-218ENST00000560469 TP53AIP1Q9HCN2 124 aa12.69□□□□□ -0.38
PBX1-218ENST00000560469 A0A0U1RQV1 116 aa12.64□□□□□ -0.39
PBX1-218ENST00000560469 NDUFS5O43920 106 aa12.64□□□□□ -0.39
PBX1-218ENST00000560469 CYSTM1Q9H1C7 97 aa12.63□□□□□ -0.39
PBX1-218ENST00000560469 SNURFQ9Y675 71 aa12.63□□□□□ -0.39
PBX1-218ENST00000560469 TNXBP22105 4242 aa12.62□□□□□ -0.39
PBX1-218ENST00000560469 MP68P56378 58 aa12.61□□□□□ -0.39
PBX1-218ENST00000560469 FAT3Q8TDW7 4589 aa12.59□□□□□ -0.39
PBX1-218ENST00000560469 LRP1Q07954 4544 aaKnown RBP12.59□□□□□ -0.39
PBX1-218ENST00000560469 H0Y9P7 68 aa12.57□□□□□ -0.4
PBX1-218ENST00000560469 NDUFC1O43677 76 aa12.57□□□□□ -0.4
PBX1-218ENST00000560469 TRAV22A0A0B4J277 110 aa12.57□□□□□ -0.4
PBX1-218ENST00000560469 KRTAP16-1A8MUX0 517 aa12.56□□□□□ -0.4
PBX1-218ENST00000560469 H3BPC8 53 aa12.56□□□□□ -0.4
PBX1-218ENST00000560469 Q8N9P0 234 aaPredicted RBP12.55□□□□□ -0.4
PBX1-218ENST00000560469 FLG2Q5D862 2391 aaPredicted RBP12.53□□□□□ -0.4
PBX1-218ENST00000560469 OXTP01178 125 aa12.53□□□□□ -0.4
PBX1-218ENST00000560469 MT1HL1P0DM35 61 aa12.53□□□□□ -0.4
PBX1-218ENST00000560469 ZCCHC13Q8WW36 166 aaKnown RBP12.52□□□□□ -0.4
PBX1-218ENST00000560469 RETNLBQ9BQ08 111 aa12.51□□□□□ -0.41
PBX1-218ENST00000560469 H7BZZ5 65 aa12.51□□□□□ -0.41
PBX1-218ENST00000560469 TMEM258P61165 79 aa12.51□□□□□ -0.41
PBX1-218ENST00000560469 LINC00208Q96KT6 92 aa12.5□□□□□ -0.41
PBX1-218ENST00000560469 KRTAP4-5Q9BYR2 181 aa12.46□□□□□ -0.41
PBX1-218ENST00000560469 C1orf64Q8NEQ6 169 aa12.45□□□□□ -0.42
PBX1-218ENST00000560469 FP248Q71RG6 208 aaPredicted RBP12.44□□□□□ -0.42
PBX1-218ENST00000560469 KRTAP13-3Q3SY46 172 aa12.4□□□□□ -0.42
PBX1-218ENST00000560469 Q5W150 140 aa12.4□□□□□ -0.42
PBX1-218ENST00000560469 MYCBP2O75592 4640 aa12.38□□□□□ -0.43
PBX1-218ENST00000560469 BIRC6Q9NR09 4857 aa12.38□□□□□ -0.43
PBX1-218ENST00000560469 C9orf92A6NGG3 77 aa12.38□□□□□ -0.43
PBX1-218ENST00000560469 FAM236DA0A1B0GTK5 79 aa12.35□□□□□ -0.43
PBX1-218ENST00000560469 FAM236CP0DP71 79 aa12.35□□□□□ -0.43
PBX1-218ENST00000560469 LOC101927531A0A1B0GV80 90 aa12.33□□□□□ -0.44
PBX1-218ENST00000560469 C20orf166-AS1Q96NR2 134 aa12.32□□□□□ -0.44
PBX1-218ENST00000560469 DMBT1Q9UGM3 2413 aaPredicted RBP12.32□□□□□ -0.44
PBX1-218ENST00000560469 ATP5EP56381 51 aaPredicted RBP12.32□□□□□ -0.44
PBX1-218ENST00000560469 A8MUU9 505 aa12.31□□□□□ -0.44
PBX1-218ENST00000560469 IGLV7-46A0A075B6I9 117 aa12.29□□□□□ -0.44
PBX1-218ENST00000560469 HERC2O95714 4834 aa12.26□□□□□ -0.45
PBX1-218ENST00000560469 SPANXA2-OT1Q8N9U9 137 aa12.22□□□□□ -0.45
PBX1-218ENST00000560469 CYP4F30PQ9H0H9 118 aa12.22□□□□□ -0.45
PBX1-218ENST00000560469 IGKV2-30P06310 120 aa12.2□□□□□ -0.46
PBX1-218ENST00000560469 PCOTHQ58A44 107 aa12.2□□□□□ -0.46
PBX1-218ENST00000560469 Q75L30 129 aa12.2□□□□□ -0.46
PBX1-218ENST00000560469 PRR4Q16378 134 aa12.18□□□□□ -0.46
PBX1-218ENST00000560469 ABCA13Q86UQ4 5058 aa12.17□□□□□ -0.46
PBX1-218ENST00000560469 J3QL48 77 aa12.16□□□□□ -0.46
PBX1-218ENST00000560469 RPS28P62857 69 aaKnown RBP12.14□□□□□ -0.47
PBX1-218ENST00000560469 SERP1Q9Y6X1 66 aa12.12□□□□□ -0.47
PBX1-218ENST00000560469 IGKV2D-30A0A075B6S6 120 aa12.1□□□□□ -0.47
PBX1-218ENST00000560469 XP32Q5T750 250 aa12.09□□□□□ -0.47
PBX1-218ENST00000560469 C7orf65Q6ZTY9 151 aa12.07□□□□□ -0.48
PBX1-218ENST00000560469 RPL37P61927 97 aaKnown RBP12.06□□□□□ -0.48
PBX1-218ENST00000560469 TPRXLQ17RH7 258 aa12.06□□□□□ -0.48
PBX1-218ENST00000560469 ATP11AUNQ6ZP68 121 aa12.03□□□□□ -0.48
PBX1-218ENST00000560469 HRES1P13985 223 aa12.02□□□□□ -0.49
PBX1-218ENST00000560469 SPINK7P58062 85 aa11.91□□□□□ -0.5
PBX1-218ENST00000560469 DMAC1Q96GE9 116 aa11.87□□□□□ -0.51
PBX1-218ENST00000560469 ACYP2P14621 99 aa11.84□□□□□ -0.51
PBX1-218ENST00000560469 COA5Q86WW8 74 aa11.83□□□□□ -0.52
PBX1-218ENST00000560469 SMIM26A0A096LP01 95 aa11.81□□□□□ -0.52
PBX1-218ENST00000560469 C4orf26Q17RF5 130 aa11.77□□□□□ -0.53
PBX1-218ENST00000560469 A8MUN3 132 aa11.75□□□□□ -0.53
PBX1-218ENST00000560469 LPAP08519 4548 aa11.7□□□□□ -0.54
PBX1-218ENST00000560469 PCLOQ9Y6V0 5065 aa11.69□□□□□ -0.54
PBX1-218ENST00000560469 LRP2P98164 4655 aa11.66□□□□□ -0.54
PBX1-218ENST00000560469 SEC61BP60468 96 aaKnown RBP11.65□□□□□ -0.54
PBX1-218ENST00000560469 CHKB-CPT1BH3BT56 60 aa11.65□□□□□ -0.55
PBX1-218ENST00000560469 COX6B2Q6YFQ2 88 aa11.65□□□□□ -0.55
PBX1-218ENST00000560469 KRTAP3-1Q9BYR8 98 aa11.6□□□□□ -0.55
PBX1-218ENST00000560469 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
PBX1-218ENST00000560469 Q1T7F1 81 aa11.56□□□□□ -0.56
PBX1-218ENST00000560469 V9GYY9 64 aa11.55□□□□□ -0.56
PBX1-218ENST00000560469 RBM12B-AS1Q9P1G2 102 aa11.43□□□□□ -0.58
PBX1-218ENST00000560469 HERC1Q15751 4861 aa11.43□□□□□ -0.58
PBX1-218ENST00000560469 MUC17Q685J3 4493 aa11.42□□□□□ -0.58
PBX1-218ENST00000560469 SPTSSBQ8NFR3 76 aa11.42□□□□□ -0.58
PBX1-218ENST00000560469 LINC01558Q9Y6Z2 57 aa11.41□□□□□ -0.58
PBX1-218ENST00000560469 HMCN2Q8NDA2 5059 aa11.38□□□□□ -0.59
PBX1-218ENST00000560469 H1FX-AS1Q4G0G2 97 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms