RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
SMAD3-214ENST00000560402 IGLV9-49A0A0B4J1Y8 123 aa7.72□□□□□ -1.17
SMAD3-214ENST00000560402 SPINK1P00995 79 aa7.71□□□□□ -1.18
SMAD3-214ENST00000560402 SS18L2Q9UHA2 77 aa7.7□□□□□ -1.18
SMAD3-214ENST00000560402 A0A087WSZ3 146 aa7.69□□□□□ -1.18
SMAD3-214ENST00000560402 SMIM20Q8N5G0 67 aa7.69□□□□□ -1.18
SMAD3-214ENST00000560402 A0A087WVE0 104 aa7.68□□□□□ -1.18
SMAD3-214ENST00000560402 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
SMAD3-214ENST00000560402 MOBPQ13875 183 aa7.67□□□□□ -1.18
SMAD3-214ENST00000560402 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
SMAD3-214ENST00000560402 J3KT08 172 aa7.66□□□□□ -1.18
SMAD3-214ENST00000560402 ASB16-AS1Q495Z4 193 aa7.64□□□□□ -1.19
SMAD3-214ENST00000560402 SSBP3-AS1Q7Z2R9 100 aa7.64□□□□□ -1.19
SMAD3-214ENST00000560402 A0A0G2JQZ4 141 aa7.62□□□□□ -1.19
SMAD3-214ENST00000560402 UQCRQO14949 82 aa7.62□□□□□ -1.19
SMAD3-214ENST00000560402 IGKV4-1P06312 121 aa7.62□□□□□ -1.19
SMAD3-214ENST00000560402 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
SMAD3-214ENST00000560402 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
SMAD3-214ENST00000560402 CD164Q04900 197 aa7.61□□□□□ -1.19
SMAD3-214ENST00000560402 COX7CP15954 63 aa7.6□□□□□ -1.19
SMAD3-214ENST00000560402 NDUFB1O75438 58 aa7.59□□□□□ -1.19
SMAD3-214ENST00000560402 TRAV7A0A075B6U4 112 aa7.58□□□□□ -1.2
SMAD3-214ENST00000560402 Q8N9L7 120 aa7.58□□□□□ -1.2
SMAD3-214ENST00000560402 DSCR10P59022 87 aa7.57□□□□□ -1.2
SMAD3-214ENST00000560402 KRTAP9-6A0A140TA67 174 aa7.56□□□□□ -1.2
SMAD3-214ENST00000560402 HRCT1Q6UXD1 115 aa7.56□□□□□ -1.2
SMAD3-214ENST00000560402 A8MWP4 228 aa7.55□□□□□ -1.2
SMAD3-214ENST00000560402 LINC00472Q9H8W2 130 aa7.55□□□□□ -1.2
SMAD3-214ENST00000560402 HCG22E2RYF7 251 aa7.54□□□□□ -1.2
SMAD3-214ENST00000560402 K7EQZ3 153 aa7.54□□□□□ -1.2
SMAD3-214ENST00000560402 XP32Q5T750 250 aa7.54□□□□□ -1.2
SMAD3-214ENST00000560402 CCDC179H3BU77 68 aa7.53□□□□□ -1.2
SMAD3-214ENST00000560402 LIMD2Q9BT23 127 aa7.52□□□□□ -1.21
SMAD3-214ENST00000560402 DEFB116Q30KQ4 102 aa7.51□□□□□ -1.21
SMAD3-214ENST00000560402 PRR15Q8IV56 129 aa7.51□□□□□ -1.21
SMAD3-214ENST00000560402 KRTAP4-1Q9BYQ7 146 aa7.51□□□□□ -1.21
SMAD3-214ENST00000560402 LCE2DQ5TA82 110 aaPredicted RBP7.47□□□□□ -1.21
SMAD3-214ENST00000560402 CASC2Q6XLA1 102 aa7.47□□□□□ -1.21
SMAD3-214ENST00000560402 Q5XG85 94 aa7.46□□□□□ -1.22
SMAD3-214ENST00000560402 WFDC13Q8IUB5 93 aa7.45□□□□□ -1.22
SMAD3-214ENST00000560402 Q96NJ1 140 aa7.45□□□□□ -1.22
SMAD3-214ENST00000560402 A0A1B0GVX0 72 aa7.44□□□□□ -1.22
SMAD3-214ENST00000560402 OCR1Q9BZK8 76 aa7.44□□□□□ -1.22
SMAD3-214ENST00000560402 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
SMAD3-214ENST00000560402 NDUFC1O43677 76 aa7.42□□□□□ -1.22
SMAD3-214ENST00000560402 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
SMAD3-214ENST00000560402 IGHV6-1A0A0B4J1U7 121 aa7.4□□□□□ -1.22
SMAD3-214ENST00000560402 C8orf87E5RJ46 101 aa7.4□□□□□ -1.22
SMAD3-214ENST00000560402 C8orf17Q9NRJ1 99 aa7.4□□□□□ -1.22
SMAD3-214ENST00000560402 MMP24-AS1A0A0U1RRL7 71 aa7.39□□□□□ -1.23
SMAD3-214ENST00000560402 MP68P56378 58 aa7.39□□□□□ -1.23
SMAD3-214ENST00000560402 KLKP1Q107X0 134 aa7.39□□□□□ -1.23
SMAD3-214ENST00000560402 C5orf47Q569G3 176 aa7.39□□□□□ -1.23
SMAD3-214ENST00000560402 TMEM254Q8TBM7 123 aa7.39□□□□□ -1.23
SMAD3-214ENST00000560402 TMEM258P61165 79 aa7.38□□□□□ -1.23
SMAD3-214ENST00000560402 TP53AIP1Q9HCN2 124 aa7.38□□□□□ -1.23
SMAD3-214ENST00000560402 LCE2CQ5TA81 110 aa7.37□□□□□ -1.23
SMAD3-214ENST00000560402 PCOTHQ58A44 107 aa7.36□□□□□ -1.23
SMAD3-214ENST00000560402 C9orf92A6NGG3 77 aa7.35□□□□□ -1.23
SMAD3-214ENST00000560402 H3BPC8 53 aa7.34□□□□□ -1.23
SMAD3-214ENST00000560402 KRTAP19-2Q3LHN2 52 aa7.34□□□□□ -1.23
SMAD3-214ENST00000560402 C1orf195Q5TG92 126 aa7.33□□□□□ -1.24
SMAD3-214ENST00000560402 MRPL34Q9BQ48 92 aaKnown RBP7.33□□□□□ -1.24
SMAD3-214ENST00000560402 NDUFS5O43920 106 aa7.32□□□□□ -1.24
SMAD3-214ENST00000560402 MT1HP80294 61 aa7.32□□□□□ -1.24
SMAD3-214ENST00000560402 SNURFQ9Y675 71 aa7.32□□□□□ -1.24
SMAD3-214ENST00000560402 ATP5EP56381 51 aaPredicted RBP7.31□□□□□ -1.24
SMAD3-214ENST00000560402 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
SMAD3-214ENST00000560402 TRAV22A0A0B4J277 110 aa7.29□□□□□ -1.24
SMAD3-214ENST00000560402 H0Y9P7 68 aa7.29□□□□□ -1.24
SMAD3-214ENST00000560402 LINC00313P59037 77 aa7.29□□□□□ -1.24
SMAD3-214ENST00000560402 FAM236DA0A1B0GTK5 79 aa7.27□□□□□ -1.25
SMAD3-214ENST00000560402 FAM236CP0DP71 79 aa7.27□□□□□ -1.25
SMAD3-214ENST00000560402 RPL37P61927 97 aaKnown RBP7.27□□□□□ -1.25
SMAD3-214ENST00000560402 H7BZZ5 65 aa7.26□□□□□ -1.25
SMAD3-214ENST00000560402 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
SMAD3-214ENST00000560402 LINC00208Q96KT6 92 aa7.24□□□□□ -1.25
SMAD3-214ENST00000560402 CYSTM1Q9H1C7 97 aa7.24□□□□□ -1.25
SMAD3-214ENST00000560402 LORP23490 312 aaPredicted RBP7.22□□□□□ -1.25
SMAD3-214ENST00000560402 C1orf64Q8NEQ6 169 aa7.22□□□□□ -1.25
SMAD3-214ENST00000560402 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
SMAD3-214ENST00000560402 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
SMAD3-214ENST00000560402 ZCCHC13Q8WW36 166 aaKnown RBP7.21□□□□□ -1.26
SMAD3-214ENST00000560402 FLGP20930 4061 aaPredicted RBP7.2□□□□□ -1.26
SMAD3-214ENST00000560402 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
SMAD3-214ENST00000560402 M0R2T5 61 aa7.18□□□□□ -1.26
SMAD3-214ENST00000560402 LOC101927531A0A1B0GV80 90 aa7.17□□□□□ -1.26
SMAD3-214ENST00000560402 RPS28P62857 69 aaKnown RBP7.16□□□□□ -1.26
SMAD3-214ENST00000560402 Q8N9P0 234 aaPredicted RBP7.16□□□□□ -1.26
SMAD3-214ENST00000560402 SERP1Q9Y6X1 66 aa7.14□□□□□ -1.27
SMAD3-214ENST00000560402 SPANXA2-OT1Q8N9U9 137 aa7.13□□□□□ -1.27
SMAD3-214ENST00000560402 KRTAP16-1A8MUX0 517 aa7.11□□□□□ -1.27
SMAD3-214ENST00000560402 Q75L30 129 aa7.11□□□□□ -1.27
SMAD3-214ENST00000560402 ATP11AUNQ6ZP68 121 aa7.09□□□□□ -1.27
SMAD3-214ENST00000560402 CYP4F30PQ9H0H9 118 aa7.07□□□□□ -1.28
SMAD3-214ENST00000560402 Q5W150 140 aa7.04□□□□□ -1.28
SMAD3-214ENST00000560402 IGKV2-30P06310 120 aa7.01□□□□□ -1.29
SMAD3-214ENST00000560402 C20orf166-AS1Q96NR2 134 aa7.01□□□□□ -1.29
SMAD3-214ENST00000560402 A8MUU9 505 aa7□□□□□ -1.29
SMAD3-214ENST00000560402 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms