RNA–Protein interactions for RNA: ENST00000560383.5

SNRPA1-210, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-210ENST00000560383 CRCT1Q9UGL9 99 aa7.96□□□□□ -1.14
SNRPA1-210ENST00000560383 DSCR8Q96T75 97 aa7.95□□□□□ -1.14
SNRPA1-210ENST00000560383 SIGMAR1Q99720 223 aa7.95□□□□□ -1.14
SNRPA1-210ENST00000560383 IGKV4-1P06312 121 aa7.94□□□□□ -1.14
SNRPA1-210ENST00000560383 KRTAP10-6P60371 365 aaPredicted RBP7.93□□□□□ -1.14
SNRPA1-210ENST00000560383 DSCR10P59022 87 aa7.92□□□□□ -1.14
SNRPA1-210ENST00000560383 C9JAW5 83 aa7.91□□□□□ -1.14
SNRPA1-210ENST00000560383 COX6B2Q6YFQ2 88 aa7.91□□□□□ -1.14
SNRPA1-210ENST00000560383 SPCS1Q9Y6A9 102 aa7.91□□□□□ -1.14
SNRPA1-210ENST00000560383 LINC00313P59037 77 aa7.9□□□□□ -1.14
SNRPA1-210ENST00000560383 C21orf62-AS1Q17RA5 79 aa7.9□□□□□ -1.14
SNRPA1-210ENST00000560383 VPS25Q9BRG1 176 aa7.9□□□□□ -1.14
SNRPA1-210ENST00000560383 KRTAP16-1A8MUX0 517 aa7.89□□□□□ -1.15
SNRPA1-210ENST00000560383 DEFB116Q30KQ4 102 aa7.89□□□□□ -1.15
SNRPA1-210ENST00000560383 JMJD7-PLA2G4BH0Y9G9 81 aa7.88□□□□□ -1.15
SNRPA1-210ENST00000560383 M0R2T5 61 aa7.88□□□□□ -1.15
SNRPA1-210ENST00000560383 H3BS24 57 aa7.87□□□□□ -1.15
SNRPA1-210ENST00000560383 Q6ZQT0 140 aa7.87□□□□□ -1.15
SNRPA1-210ENST00000560383 NOTCH2NLQ7Z3S9 236 aa7.87□□□□□ -1.15
SNRPA1-210ENST00000560383 LOC110117498A0A087WWA1 95 aa7.86□□□□□ -1.15
SNRPA1-210ENST00000560383 A0A1B0GW54 56 aa7.86□□□□□ -1.15
SNRPA1-210ENST00000560383 MTURNQ8N3F0 131 aa7.86□□□□□ -1.15
SNRPA1-210ENST00000560383 PDE6GP18545 87 aa7.85□□□□□ -1.15
SNRPA1-210ENST00000560383 H3BT86 120 aa7.84□□□□□ -1.15
SNRPA1-210ENST00000560383 K7EP34 96 aa7.84□□□□□ -1.15
SNRPA1-210ENST00000560383 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
SNRPA1-210ENST00000560383 J3KT08 172 aa7.83□□□□□ -1.16
SNRPA1-210ENST00000560383 A0A1B0GVX0 72 aa7.82□□□□□ -1.16
SNRPA1-210ENST00000560383 C8orf87E5RJ46 101 aa7.81□□□□□ -1.16
SNRPA1-210ENST00000560383 GTF2H5Q6ZYL4 71 aa7.8□□□□□ -1.16
SNRPA1-210ENST00000560383 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.79□□□□□ -1.16
SNRPA1-210ENST00000560383 C14orf132Q9NPU4 83 aa7.79□□□□□ -1.16
SNRPA1-210ENST00000560383 KRTAP4-12Q9BQ66 201 aa7.75□□□□□ -1.17
SNRPA1-210ENST00000560383 PRO0461Q9UI25 63 aa7.75□□□□□ -1.17
SNRPA1-210ENST00000560383 A8MWP4 228 aa7.73□□□□□ -1.17
SNRPA1-210ENST00000560383 NDUFB1O75438 58 aa7.73□□□□□ -1.17
SNRPA1-210ENST00000560383 KRTAP19-1Q8IUB9 90 aa7.7□□□□□ -1.18
SNRPA1-210ENST00000560383 Q8N9P0 234 aaPredicted RBP7.7□□□□□ -1.18
SNRPA1-210ENST00000560383 IGKV3D-7A0A0C4DH55 119 aa7.69□□□□□ -1.18
SNRPA1-210ENST00000560383 F8W1H4 67 aa7.69□□□□□ -1.18
SNRPA1-210ENST00000560383 NREPQ16612 68 aa7.69□□□□□ -1.18
SNRPA1-210ENST00000560383 C8orf17Q9NRJ1 99 aa7.69□□□□□ -1.18
SNRPA1-210ENST00000560383 MPLKIPQ8TAP9 179 aa7.68□□□□□ -1.18
SNRPA1-210ENST00000560383 HRES1P13985 223 aa7.67□□□□□ -1.18
SNRPA1-210ENST00000560383 PRR15Q8IV56 129 aa7.67□□□□□ -1.18
SNRPA1-210ENST00000560383 ZCCHC13Q8WW36 166 aaKnown RBP7.67□□□□□ -1.18
SNRPA1-210ENST00000560383 A0A1B0GV90 55 aa7.65□□□□□ -1.18
SNRPA1-210ENST00000560383 ETDBQ3ZM63 59 aa7.62□□□□□ -1.19
SNRPA1-210ENST00000560383 Q6ZVQ6 151 aa7.62□□□□□ -1.19
SNRPA1-210ENST00000560383 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
SNRPA1-210ENST00000560383 RBM12B-AS1Q9P1G2 102 aa7.6□□□□□ -1.19
SNRPA1-210ENST00000560383 MMP24-AS1A0A0U1RRL7 71 aa7.59□□□□□ -1.19
SNRPA1-210ENST00000560383 SPINK7P58062 85 aa7.58□□□□□ -1.2
SNRPA1-210ENST00000560383 TMEM254Q8TBM7 123 aa7.58□□□□□ -1.2
SNRPA1-210ENST00000560383 USH2AO75445 5202 aa7.58□□□□□ -1.2
SNRPA1-210ENST00000560383 FAM236DA0A1B0GTK5 79 aa7.57□□□□□ -1.2
SNRPA1-210ENST00000560383 K7EQZ3 153 aa7.57□□□□□ -1.2
SNRPA1-210ENST00000560383 FAM236CP0DP71 79 aa7.57□□□□□ -1.2
SNRPA1-210ENST00000560383 LCE3BQ5TA77 95 aa7.56□□□□□ -1.2
SNRPA1-210ENST00000560383 MRPL34Q9BQ48 92 aaKnown RBP7.56□□□□□ -1.2
SNRPA1-210ENST00000560383 BPY2O14599 106 aa7.55□□□□□ -1.2
SNRPA1-210ENST00000560383 hDV103S1A0JD37 113 aa7.53□□□□□ -1.2
SNRPA1-210ENST00000560383 SSPOA2VEC9 5147 aa7.53□□□□□ -1.2
SNRPA1-210ENST00000560383 LINC00846Q9NV44 126 aa7.5□□□□□ -1.21
SNRPA1-210ENST00000560383 UBL5Q9BZL1 73 aa7.49□□□□□ -1.21
SNRPA1-210ENST00000560383 MT2AP02795 61 aa7.47□□□□□ -1.21
SNRPA1-210ENST00000560383 Q8N9L7 120 aa7.46□□□□□ -1.22
SNRPA1-210ENST00000560383 WFDC13Q8IUB5 93 aa7.45□□□□□ -1.22
SNRPA1-210ENST00000560383 NDUFS5O43920 106 aa7.44□□□□□ -1.22
SNRPA1-210ENST00000560383 CASC2Q6XLA1 102 aa7.43□□□□□ -1.22
SNRPA1-210ENST00000560383 KRTAP9-9Q9BYP9 154 aa7.43□□□□□ -1.22
SNRPA1-210ENST00000560383 KRTAP9-4Q9BYQ2 154 aa7.43□□□□□ -1.22
SNRPA1-210ENST00000560383 FAM240AA0A1B0GVK7 77 aa7.42□□□□□ -1.22
SNRPA1-210ENST00000560383 ACYP1P07311 99 aa7.42□□□□□ -1.22
SNRPA1-210ENST00000560383 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
SNRPA1-210ENST00000560383 MT1FP04733 61 aa7.41□□□□□ -1.22
SNRPA1-210ENST00000560383 Q5W150 140 aa7.41□□□□□ -1.22
SNRPA1-210ENST00000560383 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
SNRPA1-210ENST00000560383 KRTAP9-7A8MTY7 169 aa7.37□□□□□ -1.23
SNRPA1-210ENST00000560383 HCG22E2RYF7 251 aa7.37□□□□□ -1.23
SNRPA1-210ENST00000560383 KRTAP9-3Q9BYQ3 159 aa7.37□□□□□ -1.23
SNRPA1-210ENST00000560383 KRTAP10-10P60014 251 aa7.36□□□□□ -1.23
SNRPA1-210ENST00000560383 CXCL6P80162 114 aa7.35□□□□□ -1.23
SNRPA1-210ENST00000560383 C7orf65Q6ZTY9 151 aa7.35□□□□□ -1.23
SNRPA1-210ENST00000560383 IGKV2D-30A0A075B6S6 120 aa7.33□□□□□ -1.24
SNRPA1-210ENST00000560383 J3QR89 54 aa7.33□□□□□ -1.24
SNRPA1-210ENST00000560383 IGKV2-30P06310 120 aa7.33□□□□□ -1.24
SNRPA1-210ENST00000560383 H1FX-AS1Q4G0G2 97 aa7.31□□□□□ -1.24
SNRPA1-210ENST00000560383 ATP5EP2Q5VTU8 51 aa7.29□□□□□ -1.24
SNRPA1-210ENST00000560383 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
SNRPA1-210ENST00000560383 KRTAP4-8A0A0G2JLE6 195 aa7.25□□□□□ -1.25
SNRPA1-210ENST00000560383 TP53AIP1Q9HCN2 124 aa7.24□□□□□ -1.25
SNRPA1-210ENST00000560383 HIST1H4AP62805 103 aaKnown RBP7.22□□□□□ -1.25
SNRPA1-210ENST00000560383 C4orf26Q17RF5 130 aa7.22□□□□□ -1.25
SNRPA1-210ENST00000560383 K7ERU9 68 aa7.2□□□□□ -1.26
SNRPA1-210ENST00000560383 MACF1Q9UPN3 7388 aaKnown RBP7.18□□□□□ -1.26
SNRPA1-210ENST00000560383 KRTAP19-6Q3LI70 58 aa7.17□□□□□ -1.26
SNRPA1-210ENST00000560383 LCE4AQ5TA78 99 aa7.17□□□□□ -1.26
SNRPA1-210ENST00000560383 KRTAP3-1Q9BYR8 98 aa7.16□□□□□ -1.26
SNRPA1-210ENST00000560383 A0A087WVE0 104 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms